RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 CCDC146Q8IYE0 955 aa28.22■■■□□ 2.11
LIMS2-201ENST00000324938 ANP32EQ9BTT0 268 aa28.22■■■□□ 2.11
LIMS2-201ENST00000324938 MORC1Q86VD1 984 aa28.22■■■□□ 2.11
LIMS2-201ENST00000324938 PPP6R1Q9UPN7 881 aa28.21■■■□□ 2.11
LIMS2-201ENST00000324938 NGEFQ8N5V2 710 aa28.21■■■□□ 2.11
LIMS2-201ENST00000324938 CGNL1Q0VF96 1302 aa28.2■■■□□ 2.11
LIMS2-201ENST00000324938 NSD2O96028 1365 aa28.2■■■□□ 2.1
LIMS2-201ENST00000324938 SLFN5Q08AF3 891 aa28.19■■■□□ 2.1
LIMS2-201ENST00000324938 SPATA31D1Q6ZQQ2 1576 aa28.19■■■□□ 2.1
LIMS2-201ENST00000324938 ALKQ9UM73 1620 aa28.19■■■□□ 2.1
LIMS2-201ENST00000324938 APAF1O14727 1248 aa28.18■■■□□ 2.1
LIMS2-201ENST00000324938 PLIN1O60240 522 aa28.18■■■□□ 2.1
LIMS2-201ENST00000324938 FBXO31Q5XUX0 539 aaPredicted RBP28.18■■■□□ 2.1
LIMS2-201ENST00000324938 TRMT2AQ8IZ69 625 aaKnown RBP28.18■■■□□ 2.1
LIMS2-201ENST00000324938 NINLQ9Y2I6 1382 aa28.18■■■□□ 2.1
LIMS2-201ENST00000324938 KIF13AQ9H1H9 1805 aa28.17■■■□□ 2.1
LIMS2-201ENST00000324938 YTHDC2Q9H6S0 1430 aaKnown RBP28.16■■■□□ 2.1
LIMS2-201ENST00000324938 ARHGEF40Q8TER5 1519 aa28.16■■■□□ 2.1
LIMS2-201ENST00000324938 MSH5O43196 834 aa28.15■■■□□ 2.1
LIMS2-201ENST00000324938 ANKRD26Q9UPS8 1709 aa28.13■■■□□ 2.09
LIMS2-201ENST00000324938 NKTRP30414 1462 aaKnown RBP28.13■■■□□ 2.09
LIMS2-201ENST00000324938 CRBNQ96SW2 442 aa28.13■■■□□ 2.09
LIMS2-201ENST00000324938 CABP2Q9NPB3 220 aa28.13■■■□□ 2.09
LIMS2-201ENST00000324938 SETD1AO15047 1707 aaKnown RBP28.11■■■□□ 2.09
LIMS2-201ENST00000324938 STK26Q9P289 416 aa28.11■■■□□ 2.09
LIMS2-201ENST00000324938 IQSEC2Q5JU85 1478 aa28.1■■■□□ 2.09
LIMS2-201ENST00000324938 A2ML1A8K2U0 1454 aa28.09■■■□□ 2.09
LIMS2-201ENST00000324938 SAFB2Q14151 953 aaKnown RBP eCLIP28.09■■■□□ 2.09
LIMS2-201ENST00000324938 ATAD2Q6PL18 1390 aa28.09■■■□□ 2.09
LIMS2-201ENST00000324938 E9PSI1 815 aa28.09■■■□□ 2.09
LIMS2-201ENST00000324938 ABCC11Q96J66 1382 aa28.09■■■□□ 2.09
LIMS2-201ENST00000324938 TNNT2P45379 298 aaPredicted RBP28.08■■■□□ 2.09
LIMS2-201ENST00000324938 A0A1W2PP64 1363 aa28.08■■■□□ 2.09
LIMS2-201ENST00000324938 SPINK5Q9NQ38 1064 aaPredicted RBP28.07■■■□□ 2.08
LIMS2-201ENST00000324938 DLC1Q96QB1 1528 aa28.06■■■□□ 2.08
LIMS2-201ENST00000324938 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.06■■■□□ 2.08
LIMS2-201ENST00000324938 MTHFSP49914 203 aa28.05■■■□□ 2.08
LIMS2-201ENST00000324938 C20orf194Q5TEA3 1177 aa28.05■■■□□ 2.08
LIMS2-201ENST00000324938 PRAM1Q96QH2 718 aa28.05■■■□□ 2.08
LIMS2-201ENST00000324938 STAG3Q9UJ98 1225 aa28.05■■■□□ 2.08
LIMS2-201ENST00000324938 SRPK2P78362 688 aaKnown RBP28.04■■■□□ 2.08
LIMS2-201ENST00000324938 CFAP53Q96M91 514 aa28.04■■■□□ 2.08
LIMS2-201ENST00000324938 CD163L1Q9NR16 1453 aa28.03■■■□□ 2.08
LIMS2-201ENST00000324938 RUNDC1Q96C34 613 aa28.03■■■□□ 2.08
LIMS2-201ENST00000324938 SENP3Q9H4L4 574 aaPredicted RBP28.03■■■□□ 2.08
LIMS2-201ENST00000324938 TCERG1O14776 1098 aaKnown RBP28.02■■■□□ 2.08
LIMS2-201ENST00000324938 POGKQ9P215 609 aa28.02■■■□□ 2.08
LIMS2-201ENST00000324938 MED14O60244 1454 aa28.02■■■□□ 2.08
LIMS2-201ENST00000324938 MINK1Q8N4C8 1332 aaPredicted RBP28.01■■■□□ 2.08
LIMS2-201ENST00000324938 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.07
LIMS2-201ENST00000324938 WWC1Q8IX03 1113 aa28.01■■■□□ 2.07
LIMS2-201ENST00000324938 KIF20BQ96Q89 1820 aa28.01■■■□□ 2.07
LIMS2-201ENST00000324938 DMRT2Q9Y5R5 561 aa28■■■□□ 2.07
LIMS2-201ENST00000324938 NRXN3Q9Y4C0 1643 aa27.98■■■□□ 2.07
LIMS2-201ENST00000324938 ADGRB2O60241 1585 aa27.98■■■□□ 2.07
LIMS2-201ENST00000324938 NLRP1Q9C000 1473 aa27.98■■■□□ 2.07
LIMS2-201ENST00000324938 PHF23Q9BUL5 403 aaPredicted RBP27.97■■■□□ 2.07
LIMS2-201ENST00000324938 TERF2IPQ9NYB0 399 aa27.97■■■□□ 2.07
LIMS2-201ENST00000324938 TCP11L2Q8N4U5 519 aa27.94■■■□□ 2.06
LIMS2-201ENST00000324938 MS4A1P11836 297 aa27.94■■■□□ 2.06
LIMS2-201ENST00000324938 COL3A1P02461 1466 aaPredicted RBP27.93■■■□□ 2.06
LIMS2-201ENST00000324938 MLECQ14165 292 aa27.93■■■□□ 2.06
LIMS2-201ENST00000324938 NCBP3Q53F19 620 aaKnown RBP27.93■■■□□ 2.06
LIMS2-201ENST00000324938 KDM2BQ8NHM5 1336 aa27.92■■■□□ 2.06
LIMS2-201ENST00000324938 CCDC27Q2M243 656 aa27.91■■■□□ 2.06
LIMS2-201ENST00000324938 CDK19Q9BWU1 502 aa27.91■■■□□ 2.06
LIMS2-201ENST00000324938 KNDC1Q76NI1 1749 aa27.91■■■□□ 2.06
LIMS2-201ENST00000324938 WDR63Q8IWG1 891 aa27.89■■■□□ 2.05
LIMS2-201ENST00000324938 ATP7BP35670 1465 aa27.88■■■□□ 2.05
LIMS2-201ENST00000324938 FYB1O15117 783 aa27.88■■■□□ 2.05
LIMS2-201ENST00000324938 BCAR3O75815 825 aa27.88■■■□□ 2.05
LIMS2-201ENST00000324938 HDGFL2Q7Z4V5 671 aaPredicted RBP27.88■■■□□ 2.05
LIMS2-201ENST00000324938 GGNBP2Q9H3C7 697 aa27.88■■■□□ 2.05
LIMS2-201ENST00000324938 RRP7AQ9Y3A4 280 aaKnown RBP27.88■■■□□ 2.05
LIMS2-201ENST00000324938 ZMYM3Q14202 1370 aa27.87■■■□□ 2.05
LIMS2-201ENST00000324938 ERICH6Q7L0X2 663 aa27.87■■■□□ 2.05
LIMS2-201ENST00000324938 CENPQQ7L2Z9 268 aaPredicted RBP27.86■■■□□ 2.05
LIMS2-201ENST00000324938 NEUROD2Q15784 382 aa27.86■■■□□ 2.05
LIMS2-201ENST00000324938 U2AF1L5P0DN76 240 aaPredicted RBP27.85■■■□□ 2.05
LIMS2-201ENST00000324938 U2AF1Q01081 240 aaKnown RBP eCLIP27.85■■■□□ 2.05
LIMS2-201ENST00000324938 ANP32AP39687 249 aaKnown RBP27.85■■■□□ 2.05
LIMS2-201ENST00000324938 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.85■■■□□ 2.05
LIMS2-201ENST00000324938 UBR1Q8IWV7 1749 aa27.83■■■□□ 2.05
LIMS2-201ENST00000324938 ESF1Q9H501 851 aaKnown RBP27.83■■■□□ 2.05
LIMS2-201ENST00000324938 PDE4AP27815 886 aa27.82■■■□□ 2.04
LIMS2-201ENST00000324938 CABP1Q9NZU7 370 aa27.82■■■□□ 2.04
LIMS2-201ENST00000324938 PDE3AQ14432 1141 aa27.81■■■□□ 2.04
LIMS2-201ENST00000324938 BACH2Q9BYV9 841 aa27.81■■■□□ 2.04
LIMS2-201ENST00000324938 WAPLQ7Z5K2 1190 aa27.8■■■□□ 2.04
LIMS2-201ENST00000324938 CDC42BPGQ6DT37 1551 aa27.79■■■□□ 2.04
LIMS2-201ENST00000324938 CPS1P31327 1500 aa27.79■■■□□ 2.04
LIMS2-201ENST00000324938 PNPLA6Q8IY17 1366 aa27.78■■■□□ 2.04
LIMS2-201ENST00000324938 TNRQ92752 1358 aa27.78■■■□□ 2.04
LIMS2-201ENST00000324938 TECPR2O15040 1411 aa27.78■■■□□ 2.04
LIMS2-201ENST00000324938 METP08581 1390 aa27.77■■■□□ 2.04
LIMS2-201ENST00000324938 IPO9Q96P70 1041 aaKnown RBP27.76■■■□□ 2.03
LIMS2-201ENST00000324938 PLEKHF1Q96S99 279 aa27.76■■■□□ 2.03
LIMS2-201ENST00000324938 NOP58Q9Y2X3 529 aaKnown RBP27.76■■■□□ 2.03
LIMS2-201ENST00000324938 FAM135BQ49AJ0 1406 aa27.76■■■□□ 2.03
LIMS2-201ENST00000324938 RARSP54136 660 aaKnown RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms