RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 KIF1BO60333 1816 aa4.92□□□□□ -1.62
SCAMP1-201ENST00000320280 VARS2Q5ST30 1063 aaKnown RBP4.92□□□□□ -1.62
SCAMP1-201ENST00000320280 SETD1BQ9UPS6 1966 aaKnown RBP4.92□□□□□ -1.62
SCAMP1-201ENST00000320280 YEATS2Q9ULM3 1422 aa4.91□□□□□ -1.62
SCAMP1-201ENST00000320280 NLRP1Q9C000 1473 aa4.91□□□□□ -1.62
SCAMP1-201ENST00000320280 IFT172Q9UG01 1749 aa4.91□□□□□ -1.62
SCAMP1-201ENST00000320280 LAMC1P11047 1609 aa4.91□□□□□ -1.62
SCAMP1-201ENST00000320280 PTPRTO14522 1441 aa4.91□□□□□ -1.62
SCAMP1-201ENST00000320280 KIAA1210Q9ULL0 1709 aa4.91□□□□□ -1.62
SCAMP1-201ENST00000320280 RIMS1Q86UR5 1692 aaKnown RBP4.91□□□□□ -1.62
SCAMP1-201ENST00000320280 MADDQ8WXG6 1647 aa4.91□□□□□ -1.62
SCAMP1-201ENST00000320280 HNRNPMP52272 730 aaKnown RBP eCLIP4.9□□□□□ -1.62
SCAMP1-201ENST00000320280 ARSIQ5FYB1 569 aa4.9□□□□□ -1.62
SCAMP1-201ENST00000320280 ARID3CA6NKF2 412 aa4.9□□□□□ -1.62
SCAMP1-201ENST00000320280 NLRP6P59044 892 aa4.9□□□□□ -1.62
SCAMP1-201ENST00000320280 ANKRD13DQ6ZTN6 518 aa4.9□□□□□ -1.62
SCAMP1-201ENST00000320280 STAC3Q96MF2 364 aa4.9□□□□□ -1.62
SCAMP1-201ENST00000320280 MFRPQ9BY79 579 aa4.9□□□□□ -1.62
SCAMP1-201ENST00000320280 MYO3AQ8NEV4 1616 aa4.9□□□□□ -1.63
SCAMP1-201ENST00000320280 NOS1P29475 1434 aa4.9□□□□□ -1.63
SCAMP1-201ENST00000320280 UGGT1Q9NYU2 1555 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 FAM50AQ14320 339 aaKnown RBP4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 AXIN2Q9Y2T1 843 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 DIP2AQ14689 1571 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 ZNF644Q9H582 1327 aaPredicted RBP4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 POTEB3A0JP26 581 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 PPP1R37O75864 691 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 POTEBQ6S5H4 581 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 ADGRB3O60242 1522 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 C2orf72A6NCS6 295 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 RIMBP2O15034 1052 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 NUDT7P0C024 238 aa4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 ZNF777Q9ULD5 760 aaPredicted RBP4.89□□□□□ -1.63
SCAMP1-201ENST00000320280 ERVK-7P63135 1459 aa4.88□□□□□ -1.63
SCAMP1-201ENST00000320280 UPF1Q92900 1129 aaKnown RBP eCLIP4.88□□□□□ -1.63
SCAMP1-201ENST00000320280 POLR1AO95602 1720 aaPredicted RBP4.88□□□□□ -1.63
SCAMP1-201ENST00000320280 TAOK2Q9UL54 1235 aa4.88□□□□□ -1.63
SCAMP1-201ENST00000320280 UBR1Q8IWV7 1749 aa4.88□□□□□ -1.63
SCAMP1-201ENST00000320280 AFAP1Q8N556 730 aa4.88□□□□□ -1.63
SCAMP1-201ENST00000320280 TIMELESSQ9UNS1 1208 aa4.88□□□□□ -1.63
SCAMP1-201ENST00000320280 RAB3GAP2Q9H2M9 1393 aa4.88□□□□□ -1.63
SCAMP1-201ENST00000320280 SOX12O15370 315 aa4.87□□□□□ -1.63
SCAMP1-201ENST00000320280 DOK7Q18PE1 504 aa4.87□□□□□ -1.63
SCAMP1-201ENST00000320280 TMEM121BQ9BXQ6 578 aaPredicted RBP4.87□□□□□ -1.63
SCAMP1-201ENST00000320280 PLA2R1Q13018 1463 aa4.87□□□□□ -1.63
SCAMP1-201ENST00000320280 SYNMO15061 1565 aa4.87□□□□□ -1.63
SCAMP1-201ENST00000320280 PPLO60437 1756 aa4.87□□□□□ -1.63
SCAMP1-201ENST00000320280 HOXB3P14651 431 aaPredicted RBP4.87□□□□□ -1.63
SCAMP1-201ENST00000320280 SLIT1O75093 1534 aa4.87□□□□□ -1.63
SCAMP1-201ENST00000320280 A2ML1A8K2U0 1454 aa4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 MYOM2P54296 1465 aa4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 RAPGEF3O95398 923 aa4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 TMC2Q8TDI7 906 aa4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 TMEM131LA2VDJ0 1609 aa4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 ZFYVE9O95405 1425 aa4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 PRAG1Q86YV5 1406 aa4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 CEP170BQ9Y4F5 1589 aaPredicted RBP4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 CLTCL1P53675 1640 aa4.86□□□□□ -1.63
SCAMP1-201ENST00000320280 KNDC1Q76NI1 1749 aa4.85□□□□□ -1.63
SCAMP1-201ENST00000320280 PTPRMP28827 1452 aa4.85□□□□□ -1.63
SCAMP1-201ENST00000320280 ARHGAP23Q9P227 1491 aa4.85□□□□□ -1.63
SCAMP1-201ENST00000320280 SPNS2Q8IVW8 549 aa4.84□□□□□ -1.63
SCAMP1-201ENST00000320280 SLC52A1Q9NWF4 448 aa4.84□□□□□ -1.63
SCAMP1-201ENST00000320280 RPGRIP1LQ68CZ1 1315 aa4.84□□□□□ -1.63
SCAMP1-201ENST00000320280 SETBP1Q9Y6X0 1596 aa4.84□□□□□ -1.63
SCAMP1-201ENST00000320280 NUP155O75694 1391 aa4.84□□□□□ -1.63
SCAMP1-201ENST00000320280 NRXN1Q9ULB1 1477 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 MMRN1Q13201 1228 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 FBXO22Q8NEZ5 403 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 KIF3BO15066 747 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 RRP7BPQ9NSQ0 103 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 ZMYM3Q14202 1370 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 DHX57Q6P158 1386 aaKnown RBP4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 ANKRD30BQ9BXX2 1392 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 MED14O60244 1454 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 KRTAP3-3Q9BYR6 98 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 KRTAP3-2Q9BYR7 98 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 TNRQ92752 1358 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 LMTK3Q96Q04 1460 aa4.83□□□□□ -1.64
SCAMP1-201ENST00000320280 UHRF1BP1Q6BDS2 1440 aa4.82□□□□□ -1.64
SCAMP1-201ENST00000320280 ESF1Q9H501 851 aaKnown RBP4.82□□□□□ -1.64
SCAMP1-201ENST00000320280 MYO5BQ9ULV0 1848 aa4.82□□□□□ -1.64
SCAMP1-201ENST00000320280 SETD1AO15047 1707 aaKnown RBP4.82□□□□□ -1.64
SCAMP1-201ENST00000320280 NEXMIFQ5QGS0 1516 aa4.82□□□□□ -1.64
SCAMP1-201ENST00000320280 CCDC144AA2RUR9 1427 aa4.82□□□□□ -1.64
SCAMP1-201ENST00000320280 NWD1Q149M9 1564 aa4.82□□□□□ -1.64
SCAMP1-201ENST00000320280 WASHC2CQ9Y4E1 1318 aa4.82□□□□□ -1.64
SCAMP1-201ENST00000320280 SPATA31E1Q6ZUB1 1445 aa4.81□□□□□ -1.64
SCAMP1-201ENST00000320280 HOXB1P14653 301 aaPredicted RBP4.81□□□□□ -1.64
SCAMP1-201ENST00000320280 MYT1LQ9UL68 1186 aa4.81□□□□□ -1.64
SCAMP1-201ENST00000320280 IQGAP1P46940 1657 aa4.81□□□□□ -1.64
SCAMP1-201ENST00000320280 PIK3R4Q99570 1358 aa4.81□□□□□ -1.64
SCAMP1-201ENST00000320280 HDGFP51858 240 aaKnown RBP4.81□□□□□ -1.64
SCAMP1-201ENST00000320280 MPHOSPH9Q99550 1183 aa4.81□□□□□ -1.64
SCAMP1-201ENST00000320280 ILDR1Q86SU0 546 aaPredicted RBP4.8□□□□□ -1.64
SCAMP1-201ENST00000320280 IQSEC2Q5JU85 1478 aa4.8□□□□□ -1.64
SCAMP1-201ENST00000320280 TRPM1Q7Z4N2 1603 aa4.8□□□□□ -1.64
SCAMP1-201ENST00000320280 DLC1Q96QB1 1528 aa4.8□□□□□ -1.64
SCAMP1-201ENST00000320280 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.8□□□□□ -1.64
SCAMP1-201ENST00000320280 ZEB1P37275 1124 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms