RNA–Protein interactions for RNA: ENST00000319359.7

ELL3-201, Transcript of elongation factor for RNA polymerase II 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELL3, Length 2,352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-201ENST00000319359 SPRYD3Q8NCJ5 442 aa27.8■■■□□ 2.04
ELL3-201ENST00000319359 BECN1Q14457 450 aa27.79■■■□□ 2.04
ELL3-201ENST00000319359 MTHFSP49914 203 aa27.79■■■□□ 2.04
ELL3-201ENST00000319359 MYOM2P54296 1465 aa27.78■■■□□ 2.04
ELL3-201ENST00000319359 TMEM132EQ6IEE7 984 aa27.78■■■□□ 2.04
ELL3-201ENST00000319359 VWDEQ8N2E2 1590 aa27.78■■■□□ 2.04
ELL3-201ENST00000319359 ANTXR1Q9H6X2 564 aa27.78■■■□□ 2.04
ELL3-201ENST00000319359 PMFBP1Q8TBY8 1022 aa27.77■■■□□ 2.04
ELL3-201ENST00000319359 ATP7AQ04656 1500 aa27.76■■■□□ 2.04
ELL3-201ENST00000319359 IQSEC2Q5JU85 1478 aa27.76■■■□□ 2.04
ELL3-201ENST00000319359 TBC1D2Q9BYX2 928 aa27.76■■■□□ 2.03
ELL3-201ENST00000319359 MROH2AA6NES4 1674 aa27.76■■■□□ 2.03
ELL3-201ENST00000319359 NOS1P29475 1434 aa27.76■■■□□ 2.03
ELL3-201ENST00000319359 TBC1D32Q96NH3 1257 aa27.75■■■□□ 2.03
ELL3-201ENST00000319359 PHF23Q9BUL5 403 aaPredicted RBP27.75■■■□□ 2.03
ELL3-201ENST00000319359 ARXQ96QS3 562 aa27.74■■■□□ 2.03
ELL3-201ENST00000319359 MROH1Q8NDA8 1641 aa27.72■■■□□ 2.03
ELL3-201ENST00000319359 SLC24A1O60721 1099 aa27.72■■■□□ 2.03
ELL3-201ENST00000319359 WDR63Q8IWG1 891 aa27.7■■■□□ 2.03
ELL3-201ENST00000319359 TSR2Q969E8 191 aaKnown RBP27.7■■■□□ 2.03
ELL3-201ENST00000319359 UPF2Q9HAU5 1272 aaKnown RBP27.7■■■□□ 2.02
ELL3-201ENST00000319359 FANCAO15360 1455 aa27.69■■■□□ 2.02
ELL3-201ENST00000319359 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
ELL3-201ENST00000319359 SBNO2Q9Y2G9 1366 aa27.68■■■□□ 2.02
ELL3-201ENST00000319359 KIF1BO60333 1816 aa27.68■■■□□ 2.02
ELL3-201ENST00000319359 EIF5BO60841 1220 aaKnown RBP27.67■■■□□ 2.02
ELL3-201ENST00000319359 U2AF1L5P0DN76 240 aaPredicted RBP27.67■■■□□ 2.02
ELL3-201ENST00000319359 U2AF1Q01081 240 aaKnown RBP eCLIP27.67■■■□□ 2.02
ELL3-201ENST00000319359 NUTM2DQ5VT03 806 aaPredicted RBP27.67■■■□□ 2.02
ELL3-201ENST00000319359 RWDD1Q9H446 243 aaPredicted RBP27.67■■■□□ 2.02
ELL3-201ENST00000319359 MYO3AQ8NEV4 1616 aa27.67■■■□□ 2.02
ELL3-201ENST00000319359 IFT172Q9UG01 1749 aa27.67■■■□□ 2.02
ELL3-201ENST00000319359 SENP3Q9H4L4 574 aaPredicted RBP27.66■■■□□ 2.02
ELL3-201ENST00000319359 ZNF518AQ6AHZ1 1483 aa27.66■■■□□ 2.02
ELL3-201ENST00000319359 NRXN1Q9ULB1 1477 aa27.66■■■□□ 2.02
ELL3-201ENST00000319359 MVPQ14764 893 aaKnown RBP27.66■■■□□ 2.02
ELL3-201ENST00000319359 UHRF1BP1LA0JNW5 1464 aa27.66■■■□□ 2.02
ELL3-201ENST00000319359 NEURL4Q96JN8 1562 aa27.64■■■□□ 2.02
ELL3-201ENST00000319359 FAM43AQ8N2R8 423 aa27.64■■■□□ 2.02
ELL3-201ENST00000319359 EFCAB6Q5THR3 1501 aa27.63■■■□□ 2.01
ELL3-201ENST00000319359 PPRC1Q5VV67 1664 aaKnown RBP27.63■■■□□ 2.01
ELL3-201ENST00000319359 ADGRL1O94910 1474 aa27.62■■■□□ 2.01
ELL3-201ENST00000319359 MFAP1P55081 439 aaKnown RBP27.62■■■□□ 2.01
ELL3-201ENST00000319359 FTSJ3Q8IY81 847 aaKnown RBP27.62■■■□□ 2.01
ELL3-201ENST00000319359 CFAP53Q96M91 514 aa27.61■■■□□ 2.01
ELL3-201ENST00000319359 MYH16Q9H6N6 1097 aa27.61■■■□□ 2.01
ELL3-201ENST00000319359 CCDC27Q2M243 656 aa27.6■■■□□ 2.01
ELL3-201ENST00000319359 DZIP1LQ8IYY4 767 aaKnown RBP27.6■■■□□ 2.01
ELL3-201ENST00000319359 GZF1Q9H116 711 aaPredicted RBP27.6■■■□□ 2.01
ELL3-201ENST00000319359 C14orf93Q9H972 538 aaKnown RBP27.6■■■□□ 2.01
ELL3-201ENST00000319359 QRICH2Q9H0J4 1663 aa27.6■■■□□ 2.01
ELL3-201ENST00000319359 ZKSCAN2Q63HK3 967 aa27.6■■■□□ 2.01
ELL3-201ENST00000319359 ARAP3Q8WWN8 1544 aa27.59■■■□□ 2.01
ELL3-201ENST00000319359 SAFB2Q14151 953 aaKnown RBP eCLIP27.59■■■□□ 2.01
ELL3-201ENST00000319359 CFAP65Q6ZU64 1925 aaKnown RBP27.59■■■□□ 2.01
ELL3-201ENST00000319359 EXOSC9Q06265 439 aaKnown RBP27.58■■■□□ 2.01
ELL3-201ENST00000319359 AAMPQ13685 434 aa27.58■■■□□ 2.01
ELL3-201ENST00000319359 RRAGDQ9NQL2 400 aaPredicted RBP27.58■■■□□ 2.01
ELL3-201ENST00000319359 SMC4Q9NTJ3 1288 aa27.58■■■□□ 2.01
ELL3-201ENST00000319359 CABP2Q9NPB3 220 aa27.57■■■□□ 2
ELL3-201ENST00000319359 ADGRB3O60242 1522 aa27.56■■■□□ 2
ELL3-201ENST00000319359 TRIM27P14373 513 aa27.56■■■□□ 2
ELL3-201ENST00000319359 ABCA9Q8IUA7 1624 aa27.56■■■□□ 2
ELL3-201ENST00000319359 ADGRB1O14514 1584 aa27.56■■■□□ 2
ELL3-201ENST00000319359 C22orf23Q9BZE7 217 aa27.56■■■□□ 2
ELL3-201ENST00000319359 ZC3H13Q5T200 1668 aaKnown RBP27.55■■■□□ 2
ELL3-201ENST00000319359 U2SURPO15042 1029 aaKnown RBP27.55■■■□□ 2
ELL3-201ENST00000319359 ITPRIPQ8IWB1 547 aa27.55■■■□□ 2
ELL3-201ENST00000319359 GGT6Q6P531 493 aa27.54■■■□□ 2
ELL3-201ENST00000319359 SSH1Q8WYL5 1049 aa27.54■■■□□ 2
ELL3-201ENST00000319359 SETBP1Q9Y6X0 1596 aa27.54■■■□□ 2
ELL3-201ENST00000319359 ZMYM3Q14202 1370 aa27.52■■■□□ 2
ELL3-201ENST00000319359 MCM4P33991 863 aa27.52■■■□□ 2
ELL3-201ENST00000319359 CD109Q6YHK3 1445 aa27.51■■□□□ 1.99
ELL3-201ENST00000319359 XRCC6P12956 609 aaKnown RBP eCLIP27.51■■□□□ 1.99
ELL3-201ENST00000319359 PANK2Q9BZ23 570 aa27.51■■□□□ 1.99
ELL3-201ENST00000319359 NPATQ14207 1427 aa27.5■■□□□ 1.99
ELL3-201ENST00000319359 TRIM35Q9UPQ4 493 aa27.5■■□□□ 1.99
ELL3-201ENST00000319359 GGNBP2Q9H3C7 697 aa27.5■■□□□ 1.99
ELL3-201ENST00000319359 NOB1Q9ULX3 412 aaKnown RBP27.5■■□□□ 1.99
ELL3-201ENST00000319359 L1TD1Q5T7N2 865 aaKnown RBP27.49■■□□□ 1.99
ELL3-201ENST00000319359 PLEKHF1Q96S99 279 aa27.48■■□□□ 1.99
ELL3-201ENST00000319359 KIDINS220Q9ULH0 1771 aa27.48■■□□□ 1.99
ELL3-201ENST00000319359 TULP4Q9NRJ4 1543 aa27.47■■□□□ 1.99
ELL3-201ENST00000319359 TMPOP42166 694 aaKnown RBP27.47■■□□□ 1.99
ELL3-201ENST00000319359 TMEM57Q8N5G2 664 aa27.47■■□□□ 1.99
ELL3-201ENST00000319359 ANKRD36BQ8N2N9 1353 aa27.46■■□□□ 1.99
ELL3-201ENST00000319359 EVC2Q86UK5 1308 aa27.46■■□□□ 1.99
ELL3-201ENST00000319359 PPLO60437 1756 aa27.46■■□□□ 1.99
ELL3-201ENST00000319359 ATF7IPQ6VMQ6 1270 aa27.45■■□□□ 1.99
ELL3-201ENST00000319359 USP32Q8NFA0 1604 aa27.45■■□□□ 1.98
ELL3-201ENST00000319359 ADGRB2O60241 1585 aa27.45■■□□□ 1.98
ELL3-201ENST00000319359 GOLGA6L3A6NEY3 463 aa27.44■■□□□ 1.98
ELL3-201ENST00000319359 HDAC1Q13547 482 aaPredicted RBP27.44■■□□□ 1.98
ELL3-201ENST00000319359 CHMP5Q9NZZ3 219 aa27.43■■□□□ 1.98
ELL3-201ENST00000319359 STK26Q9P289 416 aa27.43■■□□□ 1.98
ELL3-201ENST00000319359 FSD2A1L4K1 749 aa27.42■■□□□ 1.98
ELL3-201ENST00000319359 DDX19BQ9UMR2 479 aa27.42■■□□□ 1.98
ELL3-201ENST00000319359 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
ELL3-201ENST00000319359 TRAK2O60296 914 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms