RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 SBNO2Q9Y2G9 1366 aa19.66■□□□□ 0.74
MSRA-201ENST00000317173 TMEM132EQ6IEE7 984 aa19.65■□□□□ 0.74
MSRA-201ENST00000317173 CADPS2Q86UW7 1296 aa19.65■□□□□ 0.74
MSRA-201ENST00000317173 DCCP43146 1447 aa19.64■□□□□ 0.74
MSRA-201ENST00000317173 PTCH1Q13635 1447 aa19.64■□□□□ 0.74
MSRA-201ENST00000317173 QRICH2Q9H0J4 1663 aa19.64■□□□□ 0.73
MSRA-201ENST00000317173 SLAIN2Q9P270 581 aa19.64■□□□□ 0.73
MSRA-201ENST00000317173 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
MSRA-201ENST00000317173 ATF3P18847 181 aa19.63■□□□□ 0.73
MSRA-201ENST00000317173 TESK2Q96S53 571 aa19.63■□□□□ 0.73
MSRA-201ENST00000317173 CCDC7Q96M83 1385 aa19.63■□□□□ 0.73
MSRA-201ENST00000317173 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.63■□□□□ 0.73
MSRA-201ENST00000317173 ABCC11Q96J66 1382 aa19.62■□□□□ 0.73
MSRA-201ENST00000317173 ROBO1Q9Y6N7 1651 aa19.62■□□□□ 0.73
MSRA-201ENST00000317173 TECPR2O15040 1411 aa19.61■□□□□ 0.73
MSRA-201ENST00000317173 WASHC2AQ641Q2 1341 aa19.61■□□□□ 0.73
MSRA-201ENST00000317173 CENPJQ9HC77 1338 aaPredicted RBP19.61■□□□□ 0.73
MSRA-201ENST00000317173 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
MSRA-201ENST00000317173 ADGRL3Q9HAR2 1447 aa19.6■□□□□ 0.73
MSRA-201ENST00000317173 TMF1P82094 1093 aa19.6■□□□□ 0.73
MSRA-201ENST00000317173 KIF7Q2M1P5 1343 aa19.59■□□□□ 0.73
MSRA-201ENST00000317173 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
MSRA-201ENST00000317173 DISP3Q9P2K9 1392 aa19.58■□□□□ 0.73
MSRA-201ENST00000317173 C11orf95C9JLR9 678 aaPredicted RBP19.58■□□□□ 0.73
MSRA-201ENST00000317173 SIRT1Q96EB6 747 aa19.58■□□□□ 0.73
MSRA-201ENST00000317173 ROBO2Q9HCK4 1378 aa19.58■□□□□ 0.72
MSRA-201ENST00000317173 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
MSRA-201ENST00000317173 STK26Q9P289 416 aa19.55■□□□□ 0.72
MSRA-201ENST00000317173 NALCNQ8IZF0 1738 aa19.55■□□□□ 0.72
MSRA-201ENST00000317173 MST1RQ04912 1400 aa19.52■□□□□ 0.72
MSRA-201ENST00000317173 MED1Q15648 1581 aaPredicted RBP19.52■□□□□ 0.72
MSRA-201ENST00000317173 DDX10Q13206 875 aaKnown RBP19.51■□□□□ 0.71
MSRA-201ENST00000317173 POGKQ9P215 609 aa19.51■□□□□ 0.71
MSRA-201ENST00000317173 PUS7Q96PZ0 661 aaKnown RBP19.51■□□□□ 0.71
MSRA-201ENST00000317173 PRAM1Q96QH2 718 aa19.51■□□□□ 0.71
MSRA-201ENST00000317173 PHLPP1O60346 1717 aa19.5■□□□□ 0.71
MSRA-201ENST00000317173 AHDC1Q5TGY3 1603 aaPredicted RBP19.5■□□□□ 0.71
MSRA-201ENST00000317173 BRINP3Q76B58 766 aa19.48■□□□□ 0.71
MSRA-201ENST00000317173 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
MSRA-201ENST00000317173 TULP4Q9NRJ4 1543 aa19.47■□□□□ 0.71
MSRA-201ENST00000317173 CDC42BPGQ6DT37 1551 aa19.47■□□□□ 0.71
MSRA-201ENST00000317173 ADGRB2O60241 1585 aa19.46■□□□□ 0.71
MSRA-201ENST00000317173 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
MSRA-201ENST00000317173 MYOM1P52179 1685 aa19.46■□□□□ 0.7
MSRA-201ENST00000317173 JCADQ9P266 1359 aa19.45■□□□□ 0.7
MSRA-201ENST00000317173 C1orf167Q5SNV9 1468 aa19.45■□□□□ 0.7
MSRA-201ENST00000317173 POLR3GLQ9BT43 218 aa19.44■□□□□ 0.7
MSRA-201ENST00000317173 PLEKHH1Q9ULM0 1364 aa19.44■□□□□ 0.7
MSRA-201ENST00000317173 WAPLQ7Z5K2 1190 aa19.43■□□□□ 0.7
MSRA-201ENST00000317173 SAFB2Q14151 953 aaKnown RBP eCLIP19.41■□□□□ 0.7
MSRA-201ENST00000317173 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
MSRA-201ENST00000317173 NHSL1Q5SYE7 1610 aa19.41■□□□□ 0.7
MSRA-201ENST00000317173 MINK1Q8N4C8 1332 aaPredicted RBP19.4■□□□□ 0.7
MSRA-201ENST00000317173 ATAD2Q6PL18 1390 aa19.4■□□□□ 0.7
MSRA-201ENST00000317173 NINLQ9Y2I6 1382 aa19.4■□□□□ 0.7
MSRA-201ENST00000317173 SPATA31A6Q5VVP1 1343 aa19.37■□□□□ 0.69
MSRA-201ENST00000317173 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
MSRA-201ENST00000317173 WASLO00401 505 aaPredicted RBP19.35■□□□□ 0.69
MSRA-201ENST00000317173 SRPK2P78362 688 aaKnown RBP19.35■□□□□ 0.69
MSRA-201ENST00000317173 LRRC59Q96AG4 307 aaKnown RBP19.35■□□□□ 0.69
MSRA-201ENST00000317173 ORAI2Q96SN7 254 aa19.35■□□□□ 0.69
MSRA-201ENST00000317173 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
MSRA-201ENST00000317173 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
MSRA-201ENST00000317173 ILDR2Q71H61 639 aa19.34■□□□□ 0.69
MSRA-201ENST00000317173 ANP32CO43423 234 aa19.33■□□□□ 0.68
MSRA-201ENST00000317173 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
MSRA-201ENST00000317173 CABP2Q9NPB3 220 aa19.32■□□□□ 0.68
MSRA-201ENST00000317173 PANK3Q9H999 370 aa19.31■□□□□ 0.68
MSRA-201ENST00000317173 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
MSRA-201ENST00000317173 SOS2Q07890 1332 aaPredicted RBP19.31■□□□□ 0.68
MSRA-201ENST00000317173 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
MSRA-201ENST00000317173 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
MSRA-201ENST00000317173 TOPAZ1Q8N9V7 1692 aa19.3■□□□□ 0.68
MSRA-201ENST00000317173 ATP7BP35670 1465 aa19.29■□□□□ 0.68
MSRA-201ENST00000317173 ANKRD36BQ8N2N9 1353 aa19.29■□□□□ 0.68
MSRA-201ENST00000317173 PER1O15534 1290 aaPredicted RBP19.29■□□□□ 0.68
MSRA-201ENST00000317173 KIF1AQ12756 1690 aa19.28■□□□□ 0.68
MSRA-201ENST00000317173 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
MSRA-201ENST00000317173 MIER1Q8N108 512 aa19.28■□□□□ 0.68
MSRA-201ENST00000317173 KTN1Q86UP2 1357 aaKnown RBP19.27■□□□□ 0.68
MSRA-201ENST00000317173 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
MSRA-201ENST00000317173 USP32Q8NFA0 1604 aa19.27■□□□□ 0.68
MSRA-201ENST00000317173 TMC1Q8TDI8 760 aa19.27■□□□□ 0.68
MSRA-201ENST00000317173 ANKARQ7Z5J8 1434 aa19.27■□□□□ 0.68
MSRA-201ENST00000317173 LRP6O75581 1613 aa19.27■□□□□ 0.67
MSRA-201ENST00000317173 MEX3CQ5U5Q3 659 aaKnown RBP19.25■□□□□ 0.67
MSRA-201ENST00000317173 SLC12A5Q9H2X9 1139 aa19.25■□□□□ 0.67
MSRA-201ENST00000317173 CCDC61Q9Y6R9 512 aa19.25■□□□□ 0.67
MSRA-201ENST00000317173 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
MSRA-201ENST00000317173 NUDT16Q96DE0 195 aaKnown RBP19.25■□□□□ 0.67
MSRA-201ENST00000317173 PXDNQ92626 1479 aa19.25■□□□□ 0.67
MSRA-201ENST00000317173 FOXO3O43524 673 aa19.24■□□□□ 0.67
MSRA-201ENST00000317173 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
MSRA-201ENST00000317173 RGS17Q9UGC6 210 aaPredicted RBP19.24■□□□□ 0.67
MSRA-201ENST00000317173 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
MSRA-201ENST00000317173 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
MSRA-201ENST00000317173 PPIP5K1Q6PFW1 1433 aa19.23■□□□□ 0.67
MSRA-201ENST00000317173 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
MSRA-201ENST00000317173 PHF8Q9UPP1 1060 aa19.23■□□□□ 0.67
MSRA-201ENST00000317173 CD163L1Q9NR16 1453 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms