RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
RFFL-201ENST00000315249 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
RFFL-201ENST00000315249 ERBINQ96RT1 1412 aa16.62■□□□□ 0.25
RFFL-201ENST00000315249 WASHC2AQ641Q2 1341 aa16.62■□□□□ 0.25
RFFL-201ENST00000315249 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
RFFL-201ENST00000315249 H3BQV1 296 aa16.62■□□□□ 0.25
RFFL-201ENST00000315249 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
RFFL-201ENST00000315249 CHAF1AQ13111 956 aaPredicted RBP16.62■□□□□ 0.25
RFFL-201ENST00000315249 FAM184AQ8NB25 1140 aa16.61■□□□□ 0.25
RFFL-201ENST00000315249 RTEL1-TNFRSF6BF6WH68 1400 aa16.61■□□□□ 0.25
RFFL-201ENST00000315249 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
RFFL-201ENST00000315249 GBP4Q96PP9 640 aa16.61■□□□□ 0.25
RFFL-201ENST00000315249 PRM3Q9NNZ6 103 aa16.6■□□□□ 0.25
RFFL-201ENST00000315249 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
RFFL-201ENST00000315249 GZF1Q9H116 711 aaPredicted RBP16.6■□□□□ 0.25
RFFL-201ENST00000315249 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
RFFL-201ENST00000315249 ST18O60284 1047 aa16.6■□□□□ 0.25
RFFL-201ENST00000315249 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
RFFL-201ENST00000315249 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
RFFL-201ENST00000315249 KIF3AQ9Y496 699 aa16.59■□□□□ 0.25
RFFL-201ENST00000315249 SULT6B1Q6IMI4 303 aa16.58■□□□□ 0.25
RFFL-201ENST00000315249 L1TD1Q5T7N2 865 aaKnown RBP16.58■□□□□ 0.25
RFFL-201ENST00000315249 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
RFFL-201ENST00000315249 MTMR7Q9Y216 660 aa16.58■□□□□ 0.24
RFFL-201ENST00000315249 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
RFFL-201ENST00000315249 TRDNQ13061 729 aa16.57■□□□□ 0.24
RFFL-201ENST00000315249 FOXD4L6Q3SYB3 417 aaPredicted RBP16.57■□□□□ 0.24
RFFL-201ENST00000315249 FOXD4L3Q6VB84 417 aaPredicted RBP16.57■□□□□ 0.24
RFFL-201ENST00000315249 SPG7Q9UQ90 795 aa16.57■□□□□ 0.24
RFFL-201ENST00000315249 EPRSP07814 1512 aaKnown RBP16.57■□□□□ 0.24
RFFL-201ENST00000315249 DZIP1LQ8IYY4 767 aaKnown RBP16.57■□□□□ 0.24
RFFL-201ENST00000315249 KIF7Q2M1P5 1343 aa16.57■□□□□ 0.24
RFFL-201ENST00000315249 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
RFFL-201ENST00000315249 MCTP1Q6DN14 999 aa16.56■□□□□ 0.24
RFFL-201ENST00000315249 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
RFFL-201ENST00000315249 ROCK1Q13464 1354 aa16.56■□□□□ 0.24
RFFL-201ENST00000315249 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
RFFL-201ENST00000315249 PLB1Q6P1J6 1458 aa16.56■□□□□ 0.24
RFFL-201ENST00000315249 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
RFFL-201ENST00000315249 PES1O00541 588 aaKnown RBP16.55■□□□□ 0.24
RFFL-201ENST00000315249 MYL6BP14649 208 aa16.55■□□□□ 0.24
RFFL-201ENST00000315249 WASHC4Q2M389 1173 aa16.55■□□□□ 0.24
RFFL-201ENST00000315249 NFXL1Q6ZNB6 911 aa16.55■□□□□ 0.24
RFFL-201ENST00000315249 WAPLQ7Z5K2 1190 aa16.55■□□□□ 0.24
RFFL-201ENST00000315249 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
RFFL-201ENST00000315249 TPM4P67936 248 aa16.55■□□□□ 0.24
RFFL-201ENST00000315249 NGLY1Q96IV0 654 aa16.55■□□□□ 0.24
RFFL-201ENST00000315249 ADGRL1O94910 1474 aa16.55■□□□□ 0.24
RFFL-201ENST00000315249 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
RFFL-201ENST00000315249 ERICH2A1L162 156 aa16.54■□□□□ 0.24
RFFL-201ENST00000315249 WWC1Q8IX03 1113 aa16.54■□□□□ 0.24
RFFL-201ENST00000315249 FBXO31Q5XUX0 539 aaPredicted RBP16.53■□□□□ 0.24
RFFL-201ENST00000315249 CPLX2Q6PUV4 134 aaKnown RBP16.53■□□□□ 0.24
RFFL-201ENST00000315249 KIF14Q15058 1648 aa16.53■□□□□ 0.24
RFFL-201ENST00000315249 ANO2Q9NQ90 1003 aa16.53■□□□□ 0.24
RFFL-201ENST00000315249 IKQ13123 557 aaPredicted RBP16.53■□□□□ 0.24
RFFL-201ENST00000315249 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
RFFL-201ENST00000315249 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
RFFL-201ENST00000315249 CUL7Q14999 1698 aa16.52■□□□□ 0.24
RFFL-201ENST00000315249 CCAR1Q8IX12 1150 aaKnown RBP16.52■□□□□ 0.24
RFFL-201ENST00000315249 CNNM1Q9NRU3 951 aa16.52■□□□□ 0.24
RFFL-201ENST00000315249 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
RFFL-201ENST00000315249 CSPP1Q1MSJ5 1256 aa16.52■□□□□ 0.24
RFFL-201ENST00000315249 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
RFFL-201ENST00000315249 HFM1A2PYH4 1435 aa16.52■□□□□ 0.24
RFFL-201ENST00000315249 SYAP1Q96A49 352 aaPredicted RBP16.52■□□□□ 0.24
RFFL-201ENST00000315249 TRIM29Q14134 588 aa16.52■□□□□ 0.23
RFFL-201ENST00000315249 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
RFFL-201ENST00000315249 NUDT16Q96DE0 195 aaKnown RBP16.51■□□□□ 0.23
RFFL-201ENST00000315249 FOXO3O43524 673 aa16.51■□□□□ 0.23
RFFL-201ENST00000315249 CPLX1O14810 134 aa16.51■□□□□ 0.23
RFFL-201ENST00000315249 ZKSCAN1P17029 563 aaPredicted RBP16.51■□□□□ 0.23
RFFL-201ENST00000315249 CNTLNQ9NXG0 1405 aa16.5■□□□□ 0.23
RFFL-201ENST00000315249 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
RFFL-201ENST00000315249 KIAA1107Q9UPP5 1409 aa16.5■□□□□ 0.23
RFFL-201ENST00000315249 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
RFFL-201ENST00000315249 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
RFFL-201ENST00000315249 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
RFFL-201ENST00000315249 TPD52L1Q16890 204 aaPredicted RBP16.5■□□□□ 0.23
RFFL-201ENST00000315249 DAPK1P53355 1430 aa16.5■□□□□ 0.23
RFFL-201ENST00000315249 MSNP26038 577 aaKnown RBP16.49■□□□□ 0.23
RFFL-201ENST00000315249 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
RFFL-201ENST00000315249 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
RFFL-201ENST00000315249 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
RFFL-201ENST00000315249 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
RFFL-201ENST00000315249 GLIPR1L2Q4G1C9 344 aa16.49■□□□□ 0.23
RFFL-201ENST00000315249 CENPQQ7L2Z9 268 aaPredicted RBP16.49■□□□□ 0.23
RFFL-201ENST00000315249 NOC3LQ8WTT2 800 aaKnown RBP16.49■□□□□ 0.23
RFFL-201ENST00000315249 NAP1L5Q96NT1 182 aaPredicted RBP16.48■□□□□ 0.23
RFFL-201ENST00000315249 HDGFL1Q5TGJ6 251 aa16.48■□□□□ 0.23
RFFL-201ENST00000315249 TCP11L2Q8N4U5 519 aa16.48■□□□□ 0.23
RFFL-201ENST00000315249 AMOTL2Q9Y2J4 779 aa16.48■□□□□ 0.23
RFFL-201ENST00000315249 CNKSR2Q8WXI2 1034 aa16.48■□□□□ 0.23
RFFL-201ENST00000315249 CCDC43Q96MW1 224 aaKnown RBP16.47■□□□□ 0.23
RFFL-201ENST00000315249 ERC2O15083 957 aa16.47■□□□□ 0.23
RFFL-201ENST00000315249 RBM5P52756 815 aaKnown RBP eCLIP16.47■□□□□ 0.23
RFFL-201ENST00000315249 FOSBP53539 338 aa16.47■□□□□ 0.23
RFFL-201ENST00000315249 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
RFFL-201ENST00000315249 RPGRIP1LQ68CZ1 1315 aa16.46■□□□□ 0.23
RFFL-201ENST00000315249 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms