RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 YTHDC2Q9H6S0 1430 aaKnown RBP25.31■■□□□ 1.64
CD55-201ENST00000314754 ANKRD36BQ8N2N9 1353 aa25.29■■□□□ 1.64
CD55-201ENST00000314754 NINLQ9Y2I6 1382 aa25.28■■□□□ 1.64
CD55-201ENST00000314754 CGNL1Q0VF96 1302 aa25.28■■□□□ 1.64
CD55-201ENST00000314754 CABP2Q9NPB3 220 aa25.28■■□□□ 1.64
CD55-201ENST00000314754 POLR3AO14802 1390 aaPredicted RBP25.27■■□□□ 1.64
CD55-201ENST00000314754 RRP1P56182 461 aaKnown RBP25.27■■□□□ 1.64
CD55-201ENST00000314754 PLEKHH1Q9ULM0 1364 aa25.26■■□□□ 1.63
CD55-201ENST00000314754 MORC1Q86VD1 984 aa25.25■■□□□ 1.63
CD55-201ENST00000314754 SETD1AO15047 1707 aaKnown RBP25.25■■□□□ 1.63
CD55-201ENST00000314754 RIMS2Q9UQ26 1411 aa25.24■■□□□ 1.63
CD55-201ENST00000314754 NSD2O96028 1365 aa25.23■■□□□ 1.63
CD55-201ENST00000314754 ZNF521Q96K83 1311 aa25.23■■□□□ 1.63
CD55-201ENST00000314754 PRAM1Q96QH2 718 aa25.23■■□□□ 1.63
CD55-201ENST00000314754 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
CD55-201ENST00000314754 ZMYM3Q14202 1370 aa25.22■■□□□ 1.63
CD55-201ENST00000314754 SHPRHQ149N8 1683 aa25.22■■□□□ 1.63
CD55-201ENST00000314754 CCDC146Q8IYE0 955 aa25.22■■□□□ 1.63
CD55-201ENST00000314754 ATAD2Q6PL18 1390 aa25.22■■□□□ 1.63
CD55-201ENST00000314754 POGKQ9P215 609 aa25.21■■□□□ 1.63
CD55-201ENST00000314754 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
CD55-201ENST00000314754 MINK1Q8N4C8 1332 aaPredicted RBP25.2■■□□□ 1.63
CD55-201ENST00000314754 SRPK2P78362 688 aaKnown RBP25.2■■□□□ 1.62
CD55-201ENST00000314754 DLC1Q96QB1 1528 aa25.19■■□□□ 1.62
CD55-201ENST00000314754 NRXN3Q9Y4C0 1643 aa25.18■■□□□ 1.62
CD55-201ENST00000314754 NGEFQ8N5V2 710 aa25.17■■□□□ 1.62
CD55-201ENST00000314754 CCDC136Q96JN2 1154 aa25.17■■□□□ 1.62
CD55-201ENST00000314754 GOLGA2Q08379 1002 aa25.16■■□□□ 1.62
CD55-201ENST00000314754 RBM19Q9Y4C8 960 aaKnown RBP25.16■■□□□ 1.62
CD55-201ENST00000314754 A0A1W2PP64 1363 aa25.16■■□□□ 1.62
CD55-201ENST00000314754 ABCC11Q96J66 1382 aa25.15■■□□□ 1.62
CD55-201ENST00000314754 DUSP27Q5VZP5 1158 aa25.14■■□□□ 1.62
CD55-201ENST00000314754 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.14■■□□□ 1.62
CD55-201ENST00000314754 APAF1O14727 1248 aa25.14■■□□□ 1.61
CD55-201ENST00000314754 TNRQ92752 1358 aa25.12■■□□□ 1.61
CD55-201ENST00000314754 TERF2IPQ9NYB0 399 aa25.12■■□□□ 1.61
CD55-201ENST00000314754 CD163L1Q9NR16 1453 aa25.11■■□□□ 1.61
CD55-201ENST00000314754 MTHFSP49914 203 aa25.1■■□□□ 1.61
CD55-201ENST00000314754 SLFN5Q08AF3 891 aa25.09■■□□□ 1.61
CD55-201ENST00000314754 CFAP53Q96M91 514 aa25.09■■□□□ 1.61
CD55-201ENST00000314754 EXOC6Q8TAG9 804 aa25.09■■□□□ 1.61
CD55-201ENST00000314754 CDK19Q9BWU1 502 aa25.09■■□□□ 1.61
CD55-201ENST00000314754 UBR1Q8IWV7 1749 aa25.08■■□□□ 1.61
CD55-201ENST00000314754 PLIN1O60240 522 aa25.08■■□□□ 1.6
CD55-201ENST00000314754 HDGFP51858 240 aaKnown RBP25.08■■□□□ 1.6
CD55-201ENST00000314754 WAPLQ7Z5K2 1190 aa25.08■■□□□ 1.6
CD55-201ENST00000314754 TRMT2AQ8IZ69 625 aaKnown RBP25.08■■□□□ 1.6
CD55-201ENST00000314754 ANKRD26Q9UPS8 1709 aa25.07■■□□□ 1.6
CD55-201ENST00000314754 MED14O60244 1454 aa25.06■■□□□ 1.6
CD55-201ENST00000314754 METP08581 1390 aa25.05■■□□□ 1.6
CD55-201ENST00000314754 SPINK5Q9NQ38 1064 aaPredicted RBP25.05■■□□□ 1.6
CD55-201ENST00000314754 HDGFL2Q7Z4V5 671 aaPredicted RBP25.04■■□□□ 1.6
CD55-201ENST00000314754 NLRP1Q9C000 1473 aa25.03■■□□□ 1.6
CD55-201ENST00000314754 E9PSI1 815 aa25.02■■□□□ 1.6
CD55-201ENST00000314754 RUNDC1Q96C34 613 aa25.02■■□□□ 1.6
CD55-201ENST00000314754 DMRT2Q9Y5R5 561 aa25.02■■□□□ 1.6
CD55-201ENST00000314754 TMEM2Q9UHN6 1383 aa25.02■■□□□ 1.6
CD55-201ENST00000314754 KIF20BQ96Q89 1820 aa25.01■■□□□ 1.59
CD55-201ENST00000314754 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
CD55-201ENST00000314754 KNDC1Q76NI1 1749 aa25.01■■□□□ 1.59
CD55-201ENST00000314754 NKTRP30414 1462 aaKnown RBP25.01■■□□□ 1.59
CD55-201ENST00000314754 IQSEC2Q5JU85 1478 aa25.01■■□□□ 1.59
CD55-201ENST00000314754 FYB1O15117 783 aa25■■□□□ 1.59
CD55-201ENST00000314754 CABP1Q9NZU7 370 aa25■■□□□ 1.59
CD55-201ENST00000314754 TECPR2O15040 1411 aa24.99■■□□□ 1.59
CD55-201ENST00000314754 ATP7BP35670 1465 aa24.99■■□□□ 1.59
CD55-201ENST00000314754 FAM135BQ49AJ0 1406 aa24.98■■□□□ 1.59
CD55-201ENST00000314754 WWC1Q8IX03 1113 aa24.98■■□□□ 1.59
CD55-201ENST00000314754 SIRT1Q96EB6 747 aa24.97■■□□□ 1.59
CD55-201ENST00000314754 C20orf194Q5TEA3 1177 aa24.96■■□□□ 1.59
CD55-201ENST00000314754 CPS1P31327 1500 aa24.95■■□□□ 1.58
CD55-201ENST00000314754 CEBPAP49715 358 aaPredicted RBP24.95■■□□□ 1.58
CD55-201ENST00000314754 TCP11L2Q8N4U5 519 aa24.95■■□□□ 1.58
CD55-201ENST00000314754 TXNDC2Q86VQ3 553 aa24.94■■□□□ 1.58
CD55-201ENST00000314754 C3P01024 1663 aa24.94■■□□□ 1.58
CD55-201ENST00000314754 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.94■■□□□ 1.58
CD55-201ENST00000314754 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
CD55-201ENST00000314754 RRP7AQ9Y3A4 280 aaKnown RBP24.94■■□□□ 1.58
CD55-201ENST00000314754 WASLO00401 505 aaPredicted RBP24.93■■□□□ 1.58
CD55-201ENST00000314754 NCBP3Q53F19 620 aaKnown RBP24.93■■□□□ 1.58
CD55-201ENST00000314754 CRBNQ96SW2 442 aa24.93■■□□□ 1.58
CD55-201ENST00000314754 COL3A1P02461 1466 aaPredicted RBP24.93■■□□□ 1.58
CD55-201ENST00000314754 NEUROD2Q15784 382 aa24.92■■□□□ 1.58
CD55-201ENST00000314754 U2AF1L5P0DN76 240 aaPredicted RBP24.91■■□□□ 1.58
CD55-201ENST00000314754 U2AF1Q01081 240 aaKnown RBP eCLIP24.91■■□□□ 1.584e-9■■□□□ 13.6
CD55-201ENST00000314754 CCDC27Q2M243 656 aa24.91■■□□□ 1.58
CD55-201ENST00000314754 FER1L4A9Z1Z3 1794 aa24.9■■□□□ 1.58
CD55-201ENST00000314754 ADAMTS13Q76LX8 1427 aa24.9■■□□□ 1.58
CD55-201ENST00000314754 ADGRB2O60241 1585 aa24.89■■□□□ 1.58
CD55-201ENST00000314754 PLEKHG1Q9ULL1 1385 aa24.89■■□□□ 1.57
CD55-201ENST00000314754 CPSF1Q10570 1443 aaKnown RBP24.89■■□□□ 1.57
CD55-201ENST00000314754 WDR63Q8IWG1 891 aa24.88■■□□□ 1.57
CD55-201ENST00000314754 PPIP5K1Q6PFW1 1433 aa24.88■■□□□ 1.57
CD55-201ENST00000314754 LTKP29376 864 aa24.87■■□□□ 1.57
CD55-201ENST00000314754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.87■■□□□ 1.57
CD55-201ENST00000314754 FANCIQ9NVI1 1328 aa24.87■■□□□ 1.57
CD55-201ENST00000314754 PNPLA6Q8IY17 1366 aa24.87■■□□□ 1.57
CD55-201ENST00000314754 EDC4Q6P2E9 1401 aaKnown RBP24.86■■□□□ 1.57
CD55-201ENST00000314754 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
CD55-201ENST00000314754 NCKAP5LQ9HCH0 1330 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms