RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
ZNF541-202ENST00000314121 FAM184AQ8NB25 1140 aa16.95■□□□□ 0.3
ZNF541-202ENST00000314121 ABCC5O15440 1437 aa16.95■□□□□ 0.3
ZNF541-202ENST00000314121 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
ZNF541-202ENST00000314121 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
ZNF541-202ENST00000314121 NPHP1O15259 732 aa16.94■□□□□ 0.3
ZNF541-202ENST00000314121 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
ZNF541-202ENST00000314121 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
ZNF541-202ENST00000314121 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
ZNF541-202ENST00000314121 BECN2A8MW95 431 aa16.93■□□□□ 0.3
ZNF541-202ENST00000314121 MAPKBP1O60336 1514 aa16.93■□□□□ 0.3
ZNF541-202ENST00000314121 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
ZNF541-202ENST00000314121 RABEP1Q15276 862 aa16.93■□□□□ 0.3
ZNF541-202ENST00000314121 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
ZNF541-202ENST00000314121 C9orf78Q9NZ63 289 aaPredicted RBP16.93■□□□□ 0.3
ZNF541-202ENST00000314121 FAM13BQ9NYF5 915 aa16.92■□□□□ 0.3
ZNF541-202ENST00000314121 TSPYL4Q9UJ04 414 aa16.92■□□□□ 0.3
ZNF541-202ENST00000314121 NOB1Q9ULX3 412 aaKnown RBP16.92■□□□□ 0.3
ZNF541-202ENST00000314121 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
ZNF541-202ENST00000314121 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
ZNF541-202ENST00000314121 EIF2S2P20042 333 aaKnown RBP16.91■□□□□ 0.3
ZNF541-202ENST00000314121 SMC3Q9UQE7 1217 aa16.91■□□□□ 0.3
ZNF541-202ENST00000314121 HSP90AB4PQ58FF6 505 aa16.91■□□□□ 0.3
ZNF541-202ENST00000314121 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
ZNF541-202ENST00000314121 C20orf194Q5TEA3 1177 aa16.91■□□□□ 0.3
ZNF541-202ENST00000314121 MCM4P33991 863 aa16.9■□□□□ 0.3
ZNF541-202ENST00000314121 MBD3O95983 291 aa16.9■□□□□ 0.3
ZNF541-202ENST00000314121 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
ZNF541-202ENST00000314121 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
ZNF541-202ENST00000314121 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
ZNF541-202ENST00000314121 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
ZNF541-202ENST00000314121 TWISTNBQ3B726 338 aaPredicted RBP16.9■□□□□ 0.3
ZNF541-202ENST00000314121 NEXNQ0ZGT2 675 aa16.89■□□□□ 0.29
ZNF541-202ENST00000314121 RNF20Q5VTR2 975 aa16.89■□□□□ 0.29
ZNF541-202ENST00000314121 MCM2P49736 904 aa16.89■□□□□ 0.29
ZNF541-202ENST00000314121 C1orf141Q5JVX7 400 aa16.89■□□□□ 0.29
ZNF541-202ENST00000314121 CAVIN1Q6NZI2 390 aaKnown RBP16.88■□□□□ 0.29
ZNF541-202ENST00000314121 PKNOX2Q96KN3 472 aa16.88■□□□□ 0.29
ZNF541-202ENST00000314121 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
ZNF541-202ENST00000314121 VPS37CA5D8V6 355 aaPredicted RBP16.87■□□□□ 0.29
ZNF541-202ENST00000314121 GNAI3P08754 354 aa16.87■□□□□ 0.29
ZNF541-202ENST00000314121 NEK4P51957 841 aa16.87■□□□□ 0.29
ZNF541-202ENST00000314121 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
ZNF541-202ENST00000314121 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
ZNF541-202ENST00000314121 ERC2O15083 957 aa16.86■□□□□ 0.29
ZNF541-202ENST00000314121 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
ZNF541-202ENST00000314121 SKAP1Q86WV1 359 aa16.85■□□□□ 0.29
ZNF541-202ENST00000314121 C1orf115Q9H7X2 142 aa16.85■□□□□ 0.29
ZNF541-202ENST00000314121 CHD1LQ86WJ1 897 aa16.85■□□□□ 0.29
ZNF541-202ENST00000314121 CCDC39Q9UFE4 941 aa16.85■□□□□ 0.29
ZNF541-202ENST00000314121 K7ELQ4 463 aaPredicted RBP16.85■□□□□ 0.29
ZNF541-202ENST00000314121 CCDC173Q0VFZ6 552 aa16.85■□□□□ 0.29
ZNF541-202ENST00000314121 RNF214Q8ND24 703 aa16.85■□□□□ 0.29
ZNF541-202ENST00000314121 BICD2Q8TD16 824 aa16.85■□□□□ 0.29
ZNF541-202ENST00000314121 CUL7Q14999 1698 aa16.85■□□□□ 0.29
ZNF541-202ENST00000314121 IQGAP2Q13576 1575 aa16.84■□□□□ 0.29
ZNF541-202ENST00000314121 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
ZNF541-202ENST00000314121 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
ZNF541-202ENST00000314121 GRPEL1Q9HAV7 217 aa16.84■□□□□ 0.29
ZNF541-202ENST00000314121 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
ZNF541-202ENST00000314121 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
ZNF541-202ENST00000314121 DDX58O95786 925 aaKnown RBP16.84■□□□□ 0.29
ZNF541-202ENST00000314121 G3BP1Q13283 466 aaKnown RBP eCLIP16.84■□□□□ 0.29
ZNF541-202ENST00000314121 TULP1O00294 542 aaPredicted RBP16.84■□□□□ 0.29
ZNF541-202ENST00000314121 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
ZNF541-202ENST00000314121 PRPF40AO75400 957 aaKnown RBP16.84■□□□□ 0.29
ZNF541-202ENST00000314121 R3HCC1Q9Y3T6 440 aaKnown RBP16.84■□□□□ 0.29
ZNF541-202ENST00000314121 LRRFIP1Q32MZ4 808 aaKnown RBP16.83■□□□□ 0.29
ZNF541-202ENST00000314121 PRAM1Q96QH2 718 aa16.83■□□□□ 0.29
ZNF541-202ENST00000314121 MAP7D2Q96T17 732 aa16.83■□□□□ 0.29
ZNF541-202ENST00000314121 RARSP54136 660 aaKnown RBP16.83■□□□□ 0.28
ZNF541-202ENST00000314121 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.83■□□□□ 0.28
ZNF541-202ENST00000314121 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
ZNF541-202ENST00000314121 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
ZNF541-202ENST00000314121 NKTRP30414 1462 aaKnown RBP16.82■□□□□ 0.28
ZNF541-202ENST00000314121 TPM2P07951 284 aa16.82■□□□□ 0.28
ZNF541-202ENST00000314121 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
ZNF541-202ENST00000314121 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
ZNF541-202ENST00000314121 MTERF4Q7Z6M4 381 aaKnown RBP16.81■□□□□ 0.28
ZNF541-202ENST00000314121 PTPRKQ15262 1439 aa16.81■□□□□ 0.28
ZNF541-202ENST00000314121 TOMM22Q9NS69 142 aa16.81■□□□□ 0.28
ZNF541-202ENST00000314121 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
ZNF541-202ENST00000314121 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
ZNF541-202ENST00000314121 SASS6Q6UVJ0 657 aa16.8■□□□□ 0.28
ZNF541-202ENST00000314121 CCDC9Q9Y3X0 531 aaKnown RBP16.8■□□□□ 0.28
ZNF541-202ENST00000314121 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 ESPNB1AK53 854 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 SURF6O75683 361 aaKnown RBP16.79■□□□□ 0.28
ZNF541-202ENST00000314121 FCHSD2O94868 740 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 CCDC30Q5VVM6 783 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 CLASRPQ8N2M8 674 aaKnown RBP16.79■□□□□ 0.28
ZNF541-202ENST00000314121 ZNF592Q92610 1267 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 SLC52A1Q9NWF4 448 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 CABP1Q9NZU7 370 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
ZNF541-202ENST00000314121 MAGI1Q96QZ7 1491 aaPredicted RBP16.78■□□□□ 0.28
ZNF541-202ENST00000314121 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
ZNF541-202ENST00000314121 GNAI2P04899 355 aa16.78■□□□□ 0.28
ZNF541-202ENST00000314121 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms