RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 ST20-MTHFSA0A0A6YYL1 179 aa11.12□□□□□ -0.63
C2CD3-201ENST00000313663 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
C2CD3-201ENST00000313663 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
C2CD3-201ENST00000313663 SMC4Q9NTJ3 1288 aa11.11□□□□□ -0.63
C2CD3-201ENST00000313663 MARCH6O60337 910 aa11.11□□□□□ -0.63
C2CD3-201ENST00000313663 EIF2AK4Q9P2K8 1649 aaKnown RBP11.11□□□□□ -0.63
C2CD3-201ENST00000313663 CEP89Q96ST8 783 aa11.11□□□□□ -0.63
C2CD3-201ENST00000313663 NOC3LQ8WTT2 800 aaKnown RBP11.11□□□□□ -0.63
C2CD3-201ENST00000313663 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
C2CD3-201ENST00000313663 SYAP1Q96A49 352 aaPredicted RBP11.11□□□□□ -0.63
C2CD3-201ENST00000313663 PTPRTO14522 1441 aa11.11□□□□□ -0.63
C2CD3-201ENST00000313663 PRDM15P57071 1507 aaPredicted RBP11.1□□□□□ -0.63
C2CD3-201ENST00000313663 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
C2CD3-201ENST00000313663 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
C2CD3-201ENST00000313663 DEPDC5O75140 1603 aa11.1□□□□□ -0.63
C2CD3-201ENST00000313663 HECW2Q9P2P5 1572 aa11.1□□□□□ -0.63
C2CD3-201ENST00000313663 TPM4P67936 248 aa11.1□□□□□ -0.63
C2CD3-201ENST00000313663 RCAN3Q9UKA8 241 aa11.09□□□□□ -0.63
C2CD3-201ENST00000313663 TRPM2O94759 1503 aa11.09□□□□□ -0.63
C2CD3-201ENST00000313663 TET3O43151 1660 aa11.09□□□□□ -0.63
C2CD3-201ENST00000313663 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
C2CD3-201ENST00000313663 PTMSP20962 102 aa11.09□□□□□ -0.63
C2CD3-201ENST00000313663 VWDEQ8N2E2 1590 aa11.09□□□□□ -0.63
C2CD3-201ENST00000313663 MSH5O43196 834 aa11.08□□□□□ -0.64
C2CD3-201ENST00000313663 GLI2P10070 1586 aa11.08□□□□□ -0.64
C2CD3-201ENST00000313663 E9PCH4 1651 aa11.08□□□□□ -0.64
C2CD3-201ENST00000313663 HSP90B1P14625 803 aaKnown RBP11.07□□□□□ -0.64
C2CD3-201ENST00000313663 TEFQ10587 303 aa11.07□□□□□ -0.64
C2CD3-201ENST00000313663 PMFBP1Q8TBY8 1022 aa11.07□□□□□ -0.64
C2CD3-201ENST00000313663 GPRASP1Q5JY77 1395 aa11.07□□□□□ -0.64
C2CD3-201ENST00000313663 EVA1CP58658 441 aa11.07□□□□□ -0.64
C2CD3-201ENST00000313663 VPS53Q5VIR6 699 aa11.07□□□□□ -0.64
C2CD3-201ENST00000313663 NLRP13Q86W25 1043 aa11.06□□□□□ -0.64
C2CD3-201ENST00000313663 CLUAP1Q96AJ1 413 aa11.06□□□□□ -0.64
C2CD3-201ENST00000313663 CHMP4CQ96CF2 233 aa11.06□□□□□ -0.64
C2CD3-201ENST00000313663 PRKRIP1Q9H875 184 aaPredicted RBP11.06□□□□□ -0.64
C2CD3-201ENST00000313663 MROH1Q8NDA8 1641 aa11.05□□□□□ -0.64
C2CD3-201ENST00000313663 EFCAB6Q5THR3 1501 aa11.05□□□□□ -0.64
C2CD3-201ENST00000313663 SF3A1Q15459 793 aaKnown RBP11.05□□□□□ -0.64
C2CD3-201ENST00000313663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.05□□□□□ -0.64
C2CD3-201ENST00000313663 LMTK2Q8IWU2 1503 aa11.05□□□□□ -0.64
C2CD3-201ENST00000313663 TCERG1O14776 1098 aaKnown RBP11.05□□□□□ -0.64
C2CD3-201ENST00000313663 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
C2CD3-201ENST00000313663 TRAK1Q9UPV9 953 aa11.05□□□□□ -0.64
C2CD3-201ENST00000313663 MAP3K4Q9Y6R4 1608 aa11.04□□□□□ -0.64
C2CD3-201ENST00000313663 CSPP1Q1MSJ5 1256 aa11.04□□□□□ -0.64
C2CD3-201ENST00000313663 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
C2CD3-201ENST00000313663 C1orf141Q5JVX7 400 aa11.04□□□□□ -0.64
C2CD3-201ENST00000313663 NUTM2DQ5VT03 806 aaPredicted RBP11.04□□□□□ -0.64
C2CD3-201ENST00000313663 FRMPD1Q5SYB0 1578 aa11.04□□□□□ -0.64
C2CD3-201ENST00000313663 NEXNQ0ZGT2 675 aa11.04□□□□□ -0.64
C2CD3-201ENST00000313663 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
C2CD3-201ENST00000313663 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
C2CD3-201ENST00000313663 AEBP2Q6ZN18 517 aaPredicted RBP11.03□□□□□ -0.64
C2CD3-201ENST00000313663 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
C2CD3-201ENST00000313663 DIP2BQ9P265 1576 aa11.03□□□□□ -0.64
C2CD3-201ENST00000313663 ABCA6Q8N139 1617 aa11.03□□□□□ -0.64
C2CD3-201ENST00000313663 NPATQ14207 1427 aa11.03□□□□□ -0.64
C2CD3-201ENST00000313663 SPHKAPQ2M3C7 1700 aa11.03□□□□□ -0.64
C2CD3-201ENST00000313663 RNF17Q9BXT8 1623 aaKnown RBP11.03□□□□□ -0.64
C2CD3-201ENST00000313663 KIF16BQ96L93 1317 aa11.03□□□□□ -0.64
C2CD3-201ENST00000313663 TPM3P06753 285 aa11.02□□□□□ -0.64
C2CD3-201ENST00000313663 AKAP17AQ02040 695 aaKnown RBP11.02□□□□□ -0.64
C2CD3-201ENST00000313663 PDE4CQ08493 712 aa11.02□□□□□ -0.64
C2CD3-201ENST00000313663 TTC5Q8N0Z6 440 aa11.02□□□□□ -0.65
C2CD3-201ENST00000313663 CENPJQ9HC77 1338 aaPredicted RBP11.02□□□□□ -0.65
C2CD3-201ENST00000313663 NOL10Q9BSC4 688 aaKnown RBP11.02□□□□□ -0.65
C2CD3-201ENST00000313663 CLTCL1P53675 1640 aa11.02□□□□□ -0.65
C2CD3-201ENST00000313663 A0A0U1RQG5 324 aaPredicted RBP11.02□□□□□ -0.65
C2CD3-201ENST00000313663 COG3Q96JB2 828 aa11.02□□□□□ -0.65
C2CD3-201ENST00000313663 DIP2CQ9Y2E4 1556 aa11.02□□□□□ -0.65
C2CD3-201ENST00000313663 PDE3BQ13370 1112 aa11.01□□□□□ -0.65
C2CD3-201ENST00000313663 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
C2CD3-201ENST00000313663 CREBRFQ8IUR6 639 aa11.01□□□□□ -0.65
C2CD3-201ENST00000313663 MFAP1P55081 439 aaKnown RBP11.01□□□□□ -0.65
C2CD3-201ENST00000313663 AMOTL1Q8IY63 956 aa11□□□□□ -0.65
C2CD3-201ENST00000313663 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
C2CD3-201ENST00000313663 ST18O60284 1047 aa11□□□□□ -0.65
C2CD3-201ENST00000313663 UGGT1Q9NYU2 1555 aa11□□□□□ -0.65
C2CD3-201ENST00000313663 PPRC1Q5VV67 1664 aaKnown RBP11□□□□□ -0.65
C2CD3-201ENST00000313663 ABCC3O15438 1527 aa11□□□□□ -0.65
C2CD3-201ENST00000313663 SYNE3Q6ZMZ3 975 aa11□□□□□ -0.65
C2CD3-201ENST00000313663 BCORL1Q5H9F3 1711 aa10.99□□□□□ -0.65
C2CD3-201ENST00000313663 TRIM34Q9BYJ4 488 aa10.99□□□□□ -0.65
C2CD3-201ENST00000313663 TCEAL9Q9UHQ7 104 aa10.99□□□□□ -0.65
C2CD3-201ENST00000313663 ELL2O00472 640 aaPredicted RBP10.99□□□□□ -0.65
C2CD3-201ENST00000313663 TESK2Q96S53 571 aa10.99□□□□□ -0.65
C2CD3-201ENST00000313663 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
C2CD3-201ENST00000313663 RICTORQ6R327 1708 aa10.98□□□□□ -0.65
C2CD3-201ENST00000313663 CFAP70Q5T0N1 1121 aa10.98□□□□□ -0.65
C2CD3-201ENST00000313663 USP35Q9P2H5 1018 aa10.98□□□□□ -0.65
C2CD3-201ENST00000313663 GZF1Q9H116 711 aaPredicted RBP10.98□□□□□ -0.65
C2CD3-201ENST00000313663 ADGRF5Q8IZF2 1346 aa10.97□□□□□ -0.65
C2CD3-201ENST00000313663 NEURL4Q96JN8 1562 aa10.97□□□□□ -0.65
C2CD3-201ENST00000313663 CEP152O94986 1710 aa10.97□□□□□ -0.65
C2CD3-201ENST00000313663 POLR1AO95602 1720 aaPredicted RBP10.97□□□□□ -0.65
C2CD3-201ENST00000313663 PES1O00541 588 aaKnown RBP10.97□□□□□ -0.65
C2CD3-201ENST00000313663 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
C2CD3-201ENST00000313663 NOL8Q76FK4 1167 aaKnown RBP10.97□□□□□ -0.65
C2CD3-201ENST00000313663 SYTL4Q96C24 671 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms