RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 QTRT2Q9H974 415 aaKnown RBP12.13□□□□□ -0.47
TPM3-203ENST00000312970 CCDC144AA2RUR9 1427 aa12.11□□□□□ -0.47
TPM3-203ENST00000312970 ROBO2Q9HCK4 1378 aa12.1□□□□□ -0.47
TPM3-203ENST00000312970 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
TPM3-203ENST00000312970 DDX17Q92841 729 aaKnown RBP12.1□□□□□ -0.47
TPM3-203ENST00000312970 RGS12O14924 1447 aa12.1□□□□□ -0.47
TPM3-203ENST00000312970 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
TPM3-203ENST00000312970 ADGRF5Q8IZF2 1346 aa12.1□□□□□ -0.47
TPM3-203ENST00000312970 LAMC1P11047 1609 aa12.09□□□□□ -0.47
TPM3-203ENST00000312970 C1orf167Q5SNV9 1468 aa12.08□□□□□ -0.47
TPM3-203ENST00000312970 PPLO60437 1756 aa12.08□□□□□ -0.48
TPM3-203ENST00000312970 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
TPM3-203ENST00000312970 ORAI2Q96SN7 254 aa12.08□□□□□ -0.48
TPM3-203ENST00000312970 PNPLA6Q8IY17 1366 aa12.07□□□□□ -0.48
TPM3-203ENST00000312970 ANKRD30BQ9BXX2 1392 aa12.07□□□□□ -0.48
TPM3-203ENST00000312970 PRAG1Q86YV5 1406 aa12.07□□□□□ -0.48
TPM3-203ENST00000312970 STK26Q9P289 416 aa12.07□□□□□ -0.48
TPM3-203ENST00000312970 SPATA31E1Q6ZUB1 1445 aa12.06□□□□□ -0.48
TPM3-203ENST00000312970 ESCO1Q5FWF5 840 aa12.05□□□□□ -0.48
TPM3-203ENST00000312970 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
TPM3-203ENST00000312970 WAPLQ7Z5K2 1190 aa12.05□□□□□ -0.48
TPM3-203ENST00000312970 SOS2Q07890 1332 aaPredicted RBP12.05□□□□□ -0.48
TPM3-203ENST00000312970 NGLY1Q96IV0 654 aa12.04□□□□□ -0.48
TPM3-203ENST00000312970 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
TPM3-203ENST00000312970 ABCC11Q96J66 1382 aa12.04□□□□□ -0.48
TPM3-203ENST00000312970 ADAMTS2O95450 1211 aa12.03□□□□□ -0.48
TPM3-203ENST00000312970 FKBP8Q14318 412 aa12.03□□□□□ -0.48
TPM3-203ENST00000312970 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
TPM3-203ENST00000312970 LRPPRCP42704 1394 aaKnown RBP12.03□□□□□ -0.48
TPM3-203ENST00000312970 COL22A1Q8NFW1 1626 aaPredicted RBP12.02□□□□□ -0.49
TPM3-203ENST00000312970 SIRT1Q96EB6 747 aa12.02□□□□□ -0.49
TPM3-203ENST00000312970 C14orf93Q9H972 538 aaKnown RBP12.02□□□□□ -0.49
TPM3-203ENST00000312970 MARF1Q9Y4F3 1742 aaKnown RBP12.01□□□□□ -0.49
TPM3-203ENST00000312970 FOXO3O43524 673 aa12.01□□□□□ -0.49
TPM3-203ENST00000312970 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
TPM3-203ENST00000312970 ATAD2Q6PL18 1390 aa12.01□□□□□ -0.49
TPM3-203ENST00000312970 TECPR2O15040 1411 aa12.01□□□□□ -0.49
TPM3-203ENST00000312970 CDC42BPGQ6DT37 1551 aa12.01□□□□□ -0.49
TPM3-203ENST00000312970 NUTM2FA1L443 756 aa12□□□□□ -0.49
TPM3-203ENST00000312970 PIK3C2GO75747 1445 aa12□□□□□ -0.49
TPM3-203ENST00000312970 IFT172Q9UG01 1749 aa12□□□□□ -0.49
TPM3-203ENST00000312970 CFAP70Q5T0N1 1121 aa11.99□□□□□ -0.49
TPM3-203ENST00000312970 USP21Q9UK80 565 aa11.99□□□□□ -0.49
TPM3-203ENST00000312970 DHX57Q6P158 1386 aaKnown RBP11.99□□□□□ -0.49
TPM3-203ENST00000312970 RAB3GAP2Q9H2M9 1393 aa11.99□□□□□ -0.49
TPM3-203ENST00000312970 YTHDC2Q9H6S0 1430 aaKnown RBP11.99□□□□□ -0.49
TPM3-203ENST00000312970 PLEKHH1Q9ULM0 1364 aa11.98□□□□□ -0.49
TPM3-203ENST00000312970 KNDC1Q76NI1 1749 aa11.97□□□□□ -0.49
TPM3-203ENST00000312970 HRCP23327 699 aa11.97□□□□□ -0.49
TPM3-203ENST00000312970 XPCQ01831 940 aaPredicted RBP11.97□□□□□ -0.49
TPM3-203ENST00000312970 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
TPM3-203ENST00000312970 TRPC5Q9UL62 973 aaPredicted RBP11.96□□□□□ -0.49
TPM3-203ENST00000312970 MYOM2P54296 1465 aa11.95□□□□□ -0.5
TPM3-203ENST00000312970 PXDNQ92626 1479 aa11.95□□□□□ -0.5
TPM3-203ENST00000312970 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
TPM3-203ENST00000312970 KRT28Q7Z3Y7 464 aa11.95□□□□□ -0.5
TPM3-203ENST00000312970 CCDC125Q86Z20 511 aa11.95□□□□□ -0.5
TPM3-203ENST00000312970 PRAM1Q96QH2 718 aa11.95□□□□□ -0.5
TPM3-203ENST00000312970 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
TPM3-203ENST00000312970 ATRNO75882 1429 aa11.94□□□□□ -0.5
TPM3-203ENST00000312970 FMN2Q9NZ56 1722 aa11.94□□□□□ -0.5
TPM3-203ENST00000312970 DCAF11Q8TEB1 546 aa11.94□□□□□ -0.5
TPM3-203ENST00000312970 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
TPM3-203ENST00000312970 POGKQ9P215 609 aa11.94□□□□□ -0.5
TPM3-203ENST00000312970 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.94□□□□□ -0.5
TPM3-203ENST00000312970 KIF1AQ12756 1690 aa11.94□□□□□ -0.5
TPM3-203ENST00000312970 PSME1Q06323 249 aa11.93□□□□□ -0.5
TPM3-203ENST00000312970 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
TPM3-203ENST00000312970 PHF8Q9UPP1 1060 aa11.93□□□□□ -0.5
TPM3-203ENST00000312970 SPATA31A3Q5VYP0 1347 aa11.92□□□□□ -0.5
TPM3-203ENST00000312970 RGPD8O14715 1765 aaPredicted RBP11.92□□□□□ -0.5
TPM3-203ENST00000312970 BCL9LQ86UU0 1499 aa11.91□□□□□ -0.5
TPM3-203ENST00000312970 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
TPM3-203ENST00000312970 DEFB132Q7Z7B7 95 aa11.9□□□□□ -0.5
TPM3-203ENST00000312970 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
TPM3-203ENST00000312970 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
TPM3-203ENST00000312970 DLC1Q96QB1 1528 aa11.88□□□□□ -0.51
TPM3-203ENST00000312970 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
TPM3-203ENST00000312970 PMFBP1Q8TBY8 1022 aa11.88□□□□□ -0.51
TPM3-203ENST00000312970 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
TPM3-203ENST00000312970 GLI3P10071 1580 aa11.88□□□□□ -0.51
TPM3-203ENST00000312970 ABCA3Q99758 1704 aa11.87□□□□□ -0.51
TPM3-203ENST00000312970 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
TPM3-203ENST00000312970 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
TPM3-203ENST00000312970 HIRIP3Q9BW71 556 aaPredicted RBP11.87□□□□□ -0.51
TPM3-203ENST00000312970 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
TPM3-203ENST00000312970 SLIT2O94813 1529 aa11.86□□□□□ -0.51
TPM3-203ENST00000312970 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
TPM3-203ENST00000312970 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
TPM3-203ENST00000312970 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
TPM3-203ENST00000312970 ADGRB1O14514 1584 aa11.86□□□□□ -0.51
TPM3-203ENST00000312970 PLCH1Q4KWH8 1693 aa11.86□□□□□ -0.51
TPM3-203ENST00000312970 NWD2Q9ULI1 1742 aa11.86□□□□□ -0.51
TPM3-203ENST00000312970 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
TPM3-203ENST00000312970 RALGAPBQ86X10 1494 aa11.85□□□□□ -0.51
TPM3-203ENST00000312970 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
TPM3-203ENST00000312970 BLMP54132 1417 aaPredicted RBP11.85□□□□□ -0.51
TPM3-203ENST00000312970 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
TPM3-203ENST00000312970 ARHGEF10O15013 1369 aa11.84□□□□□ -0.51
TPM3-203ENST00000312970 EIF3AQ14152 1382 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms