RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GOLGA6L19H0YKK7 550 aa10.75□□□□□ -0.69
COL6A5-202ENST00000312481 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
COL6A5-202ENST00000312481 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.75□□□□□ -0.69
COL6A5-202ENST00000312481 CCDC173Q0VFZ6 552 aa10.74□□□□□ -0.69
COL6A5-202ENST00000312481 PLXNC1O60486 1568 aa10.74□□□□□ -0.69
COL6A5-202ENST00000312481 ERC2O15083 957 aa10.74□□□□□ -0.69
COL6A5-202ENST00000312481 ERBINQ96RT1 1412 aa10.74□□□□□ -0.69
COL6A5-202ENST00000312481 CDR1P51861 262 aa10.73□□□□□ -0.69
COL6A5-202ENST00000312481 CLUAP1Q96AJ1 413 aa10.73□□□□□ -0.69
COL6A5-202ENST00000312481 PIP4K2AP48426 406 aaPredicted RBP10.73□□□□□ -0.69
COL6A5-202ENST00000312481 PUS7Q96PZ0 661 aaKnown RBP10.73□□□□□ -0.69
COL6A5-202ENST00000312481 EID1Q9Y6B2 187 aa10.73□□□□□ -0.69
COL6A5-202ENST00000312481 TUBB4BP68371 445 aa10.73□□□□□ -0.69
COL6A5-202ENST00000312481 TSPYL1Q9H0U9 437 aa10.73□□□□□ -0.69
COL6A5-202ENST00000312481 DZIP1LQ8IYY4 767 aaKnown RBP10.73□□□□□ -0.69
COL6A5-202ENST00000312481 ST20-MTHFSA0A0A6YYL1 179 aa10.72□□□□□ -0.69
COL6A5-202ENST00000312481 ANKRD1Q15327 319 aa10.72□□□□□ -0.69
COL6A5-202ENST00000312481 ARHGEF5Q12774 1597 aa10.72□□□□□ -0.69
COL6A5-202ENST00000312481 PSMA5P28066 241 aa10.72□□□□□ -0.69
COL6A5-202ENST00000312481 ERCC4Q92889 916 aaPredicted RBP10.72□□□□□ -0.69
COL6A5-202ENST00000312481 KCNH8Q96L42 1107 aa10.71□□□□□ -0.69
COL6A5-202ENST00000312481 IPO7O95373 1038 aaKnown RBP10.71□□□□□ -0.7
COL6A5-202ENST00000312481 SLC52A1Q9NWF4 448 aa10.71□□□□□ -0.7
COL6A5-202ENST00000312481 ADAMTS12P58397 1594 aa10.7□□□□□ -0.7
COL6A5-202ENST00000312481 TUBB4AP04350 444 aa10.7□□□□□ -0.7
COL6A5-202ENST00000312481 SLKQ9H2G2 1235 aaPredicted RBP10.7□□□□□ -0.7
COL6A5-202ENST00000312481 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
COL6A5-202ENST00000312481 ASXL1Q8IXJ9 1541 aa10.7□□□□□ -0.7
COL6A5-202ENST00000312481 DHX16O60231 1041 aaKnown RBP10.69□□□□□ -0.7
COL6A5-202ENST00000312481 DDX58O95786 925 aaKnown RBP10.69□□□□□ -0.7
COL6A5-202ENST00000312481 NOL10Q9BSC4 688 aaKnown RBP10.69□□□□□ -0.7
COL6A5-202ENST00000312481 SENP3Q9H4L4 574 aaPredicted RBP10.69□□□□□ -0.7
COL6A5-202ENST00000312481 MYO6Q9UM54 1294 aa10.69□□□□□ -0.7
COL6A5-202ENST00000312481 NPC1L1Q9UHC9 1359 aa10.69□□□□□ -0.7
COL6A5-202ENST00000312481 PPP6R1Q9UPN7 881 aa10.69□□□□□ -0.7
COL6A5-202ENST00000312481 KIAA0556O60303 1618 aa10.69□□□□□ -0.7
COL6A5-202ENST00000312481 HIRIP3Q9BW71 556 aaPredicted RBP10.69□□□□□ -0.7
COL6A5-202ENST00000312481 DDX49Q9Y6V7 483 aaKnown RBP10.69□□□□□ -0.7
COL6A5-202ENST00000312481 VIRMAQ69YN4 1812 aaKnown RBP10.68□□□□□ -0.7
COL6A5-202ENST00000312481 TNNT3P45378 269 aaPredicted RBP10.68□□□□□ -0.7
COL6A5-202ENST00000312481 CDC45O75419 566 aa10.68□□□□□ -0.7
COL6A5-202ENST00000312481 NEXNQ0ZGT2 675 aa10.68□□□□□ -0.7
COL6A5-202ENST00000312481 WDR62O43379 1518 aa10.68□□□□□ -0.7
COL6A5-202ENST00000312481 SOS1Q07889 1333 aaPredicted RBP10.67□□□□□ -0.7
COL6A5-202ENST00000312481 PANK3Q9H999 370 aa10.67□□□□□ -0.7
COL6A5-202ENST00000312481 NAP1L2Q9ULW6 460 aaPredicted RBP10.67□□□□□ -0.7
COL6A5-202ENST00000312481 AEBP1Q8IUX7 1158 aa10.67□□□□□ -0.7
COL6A5-202ENST00000312481 GNAI3P08754 354 aa10.67□□□□□ -0.7
COL6A5-202ENST00000312481 HS1BP3Q53T59 392 aa10.67□□□□□ -0.7
COL6A5-202ENST00000312481 CCDC47Q96A33 483 aaKnown RBP10.67□□□□□ -0.7
COL6A5-202ENST00000312481 IL16Q14005 1332 aa10.67□□□□□ -0.7
COL6A5-202ENST00000312481 KDM5DQ9BY66 1539 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 COG3Q96JB2 828 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 GRIN2AQ12879 1464 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 SCAF11Q99590 1463 aaKnown RBP10.66□□□□□ -0.7
COL6A5-202ENST00000312481 MAST1Q9Y2H9 1570 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 JMYQ8N9B5 988 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 ADGRL2O95490 1459 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 LAMC1P11047 1609 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 CROCC2H7BZ55 1655 aa10.66□□□□□ -0.7
COL6A5-202ENST00000312481 BACH2Q9BYV9 841 aa10.65□□□□□ -0.7
COL6A5-202ENST00000312481 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
COL6A5-202ENST00000312481 NASPP49321 788 aaPredicted RBP10.65□□□□□ -0.7
COL6A5-202ENST00000312481 CAGE1Q8TC20 777 aa10.65□□□□□ -0.7
COL6A5-202ENST00000312481 BECN2A8MW95 431 aa10.65□□□□□ -0.7
COL6A5-202ENST00000312481 ALDH1L2Q3SY69 923 aa10.65□□□□□ -0.71
COL6A5-202ENST00000312481 IQCEQ6IPM2 695 aa10.65□□□□□ -0.71
COL6A5-202ENST00000312481 LUC7LQ9NQ29 371 aaKnown RBP10.64□□□□□ -0.71
COL6A5-202ENST00000312481 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
COL6A5-202ENST00000312481 PNISRQ8TF01 805 aaKnown RBP10.64□□□□□ -0.71
COL6A5-202ENST00000312481 NEMFO60524 1076 aa10.64□□□□□ -0.71
COL6A5-202ENST00000312481 RAD54L2Q9Y4B4 1467 aa10.64□□□□□ -0.71
COL6A5-202ENST00000312481 RDXP35241 583 aaKnown RBP10.64□□□□□ -0.71
COL6A5-202ENST00000312481 MCM3P25205 808 aa10.63□□□□□ -0.71
COL6A5-202ENST00000312481 CCT4P50991 539 aaKnown RBP10.63□□□□□ -0.71
COL6A5-202ENST00000312481 C14orf37Q86TY3 774 aa10.63□□□□□ -0.71
COL6A5-202ENST00000312481 DIAPH1O60610 1272 aaKnown RBP10.63□□□□□ -0.71
COL6A5-202ENST00000312481 WDR7Q9Y4E6 1490 aa10.63□□□□□ -0.71
COL6A5-202ENST00000312481 CDC42BPAQ5VT25 1732 aa10.63□□□□□ -0.71
COL6A5-202ENST00000312481 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
COL6A5-202ENST00000312481 FAM107BQ9H098 131 aa10.63□□□□□ -0.71
COL6A5-202ENST00000312481 USP8P40818 1118 aa10.62□□□□□ -0.71
COL6A5-202ENST00000312481 KIAA1210Q9ULL0 1709 aa10.62□□□□□ -0.71
COL6A5-202ENST00000312481 WDR33Q9C0J8 1336 aaKnown RBP10.62□□□□□ -0.71
COL6A5-202ENST00000312481 H3BQV1 296 aa10.62□□□□□ -0.71
COL6A5-202ENST00000312481 DCTN1Q14203 1278 aa10.62□□□□□ -0.71
COL6A5-202ENST00000312481 IFFO2Q5TF58 517 aa10.62□□□□□ -0.71
COL6A5-202ENST00000312481 AK7Q96M32 723 aa10.62□□□□□ -0.71
COL6A5-202ENST00000312481 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
COL6A5-202ENST00000312481 SYNMO15061 1565 aa10.61□□□□□ -0.71
COL6A5-202ENST00000312481 KIF3BO15066 747 aa10.61□□□□□ -0.71
COL6A5-202ENST00000312481 HSP90B2PQ58FF3 399 aa10.61□□□□□ -0.71
COL6A5-202ENST00000312481 PIK3C2GO75747 1445 aa10.61□□□□□ -0.71
COL6A5-202ENST00000312481 KRT32Q14532 448 aa10.61□□□□□ -0.71
COL6A5-202ENST00000312481 XBP1P17861 261 aa10.61□□□□□ -0.71
COL6A5-202ENST00000312481 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
COL6A5-202ENST00000312481 LRPPRCP42704 1394 aaKnown RBP10.61□□□□□ -0.71
COL6A5-202ENST00000312481 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
COL6A5-202ENST00000312481 RTEL1-TNFRSF6BF6WH68 1400 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms