RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
ERCC4-201ENST00000311895 ZNF644Q9H582 1327 aaPredicted RBP10.3□□□□□ -0.76
ERCC4-201ENST00000311895 PRPF40AO75400 957 aaKnown RBP10.3□□□□□ -0.76
ERCC4-201ENST00000311895 SKIDA1Q1XH10 827 aa10.3□□□□□ -0.76
ERCC4-201ENST00000311895 WASHC4Q2M389 1173 aa10.3□□□□□ -0.76
ERCC4-201ENST00000311895 LRRFIP1Q32MZ4 808 aaKnown RBP10.3□□□□□ -0.76
ERCC4-201ENST00000311895 CHMP4CQ96CF2 233 aa10.3□□□□□ -0.76
ERCC4-201ENST00000311895 TRIM34Q9BYJ4 488 aa10.3□□□□□ -0.76
ERCC4-201ENST00000311895 NOL10Q9BSC4 688 aaKnown RBP10.3□□□□□ -0.76
ERCC4-201ENST00000311895 HOOK1Q9UJC3 728 aaKnown RBP10.3□□□□□ -0.76
ERCC4-201ENST00000311895 PDS5BQ9NTI5 1447 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 MRE11P49959 708 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 CEBPZQ03701 1054 aaKnown RBP10.29□□□□□ -0.76
ERCC4-201ENST00000311895 SPC24Q8NBT2 197 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 ERICH2A1L162 156 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 CDC45O75419 566 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 AMOTL1Q8IY63 956 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 UACAQ9BZF9 1416 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 WASHC2AQ641Q2 1341 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 TMEM132EQ6IEE7 984 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 FMNL2Q96PY5 1086 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 PSME1Q06323 249 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 RIC3Q7Z5B4 369 aa10.29□□□□□ -0.76
ERCC4-201ENST00000311895 DDX58O95786 925 aaKnown RBP10.28□□□□□ -0.76
ERCC4-201ENST00000311895 CCDC47Q96A33 483 aaKnown RBP10.28□□□□□ -0.76
ERCC4-201ENST00000311895 RUFY1Q96T51 708 aa10.28□□□□□ -0.76
ERCC4-201ENST00000311895 CCDC39Q9UFE4 941 aa10.28□□□□□ -0.76
ERCC4-201ENST00000311895 ROCK1Q13464 1354 aa10.28□□□□□ -0.76
ERCC4-201ENST00000311895 SDF4Q9BRK5 362 aa10.28□□□□□ -0.76
ERCC4-201ENST00000311895 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
ERCC4-201ENST00000311895 ATP2B1P20020 1258 aa10.28□□□□□ -0.76
ERCC4-201ENST00000311895 TRIM5Q9C035 493 aa10.28□□□□□ -0.76
ERCC4-201ENST00000311895 GNAI1P63096 354 aa10.27□□□□□ -0.76
ERCC4-201ENST00000311895 ERC2O15083 957 aa10.27□□□□□ -0.77
ERCC4-201ENST00000311895 NEK4P51957 841 aa10.27□□□□□ -0.77
ERCC4-201ENST00000311895 CNTLNQ9NXG0 1405 aa10.27□□□□□ -0.77
ERCC4-201ENST00000311895 AKNAQ7Z591 1439 aa10.27□□□□□ -0.77
ERCC4-201ENST00000311895 BCAR3O75815 825 aa10.27□□□□□ -0.77
ERCC4-201ENST00000311895 UBTFL1P0CB47 393 aaPredicted RBP10.27□□□□□ -0.77
ERCC4-201ENST00000311895 MTHFSP49914 203 aa10.27□□□□□ -0.77
ERCC4-201ENST00000311895 RALYLQ86SE5 291 aaKnown RBP10.27□□□□□ -0.77
ERCC4-201ENST00000311895 SMC2O95347 1197 aa10.26□□□□□ -0.77
ERCC4-201ENST00000311895 STK11IPQ8N1F8 1099 aa10.26□□□□□ -0.77
ERCC4-201ENST00000311895 CTDP1Q9Y5B0 961 aaPredicted RBP10.26□□□□□ -0.77
ERCC4-201ENST00000311895 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
ERCC4-201ENST00000311895 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
ERCC4-201ENST00000311895 MAP4K4O95819 1239 aaPredicted RBP10.26□□□□□ -0.77
ERCC4-201ENST00000311895 ARGLU1Q9NWB6 273 aaPredicted RBP10.26□□□□□ -0.77
ERCC4-201ENST00000311895 FIBPO43427 364 aa10.26□□□□□ -0.77
ERCC4-201ENST00000311895 OLFM4Q6UX06 510 aa10.26□□□□□ -0.77
ERCC4-201ENST00000311895 DNAJC2Q99543 621 aaKnown RBP10.26□□□□□ -0.77
ERCC4-201ENST00000311895 BRPF1P55201 1214 aaPredicted RBP10.25□□□□□ -0.77
ERCC4-201ENST00000311895 FSD1Q9BTV5 496 aa10.25□□□□□ -0.77
ERCC4-201ENST00000311895 FAM177BA6PVY3 158 aa10.25□□□□□ -0.77
ERCC4-201ENST00000311895 CAGE1Q8TC20 777 aa10.25□□□□□ -0.77
ERCC4-201ENST00000311895 TSR2Q969E8 191 aaKnown RBP10.25□□□□□ -0.77
ERCC4-201ENST00000311895 AK7Q96M32 723 aa10.25□□□□□ -0.77
ERCC4-201ENST00000311895 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.25□□□□□ -0.77
ERCC4-201ENST00000311895 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
ERCC4-201ENST00000311895 TCP11L2Q8N4U5 519 aa10.25□□□□□ -0.77
ERCC4-201ENST00000311895 TSPY26PQ9H489 355 aa10.25□□□□□ -0.77
ERCC4-201ENST00000311895 SURF6O75683 361 aaKnown RBP10.25□□□□□ -0.77
ERCC4-201ENST00000311895 NOB1Q9ULX3 412 aaKnown RBP10.25□□□□□ -0.77
ERCC4-201ENST00000311895 EXOSC9Q06265 439 aaKnown RBP10.24□□□□□ -0.77
ERCC4-201ENST00000311895 CNTROBQ8N137 903 aa10.24□□□□□ -0.77
ERCC4-201ENST00000311895 STK3Q13188 491 aa10.24□□□□□ -0.77
ERCC4-201ENST00000311895 HSP90B2PQ58FF3 399 aa10.24□□□□□ -0.77
ERCC4-201ENST00000311895 NAT10Q9H0A0 1025 aaKnown RBP10.24□□□□□ -0.77
ERCC4-201ENST00000311895 CT47A1Q5JQC4 288 aaPredicted RBP10.23□□□□□ -0.77
ERCC4-201ENST00000311895 CCDC43Q96MW1 224 aaKnown RBP10.23□□□□□ -0.77
ERCC4-201ENST00000311895 EPS15P42566 896 aa10.22□□□□□ -0.77
ERCC4-201ENST00000311895 HSP90AB4PQ58FF6 505 aa10.22□□□□□ -0.77
ERCC4-201ENST00000311895 ZFYVE27Q5T4F4 411 aa10.22□□□□□ -0.77
ERCC4-201ENST00000311895 KIF21BO75037 1637 aa10.22□□□□□ -0.77
ERCC4-201ENST00000311895 NINLQ9Y2I6 1382 aa10.22□□□□□ -0.77
ERCC4-201ENST00000311895 RRP12Q5JTH9 1297 aaKnown RBP10.22□□□□□ -0.77
ERCC4-201ENST00000311895 PRDM2Q13029 1718 aa10.22□□□□□ -0.77
ERCC4-201ENST00000311895 PSMA5P28066 241 aa10.22□□□□□ -0.77
ERCC4-201ENST00000311895 PPP2R1AP30153 589 aa10.22□□□□□ -0.77
ERCC4-201ENST00000311895 DHX37Q8IY37 1157 aaKnown RBP10.21□□□□□ -0.77
ERCC4-201ENST00000311895 OFD1O75665 1012 aa10.21□□□□□ -0.78
ERCC4-201ENST00000311895 KINO60870 393 aaKnown RBP10.21□□□□□ -0.78
ERCC4-201ENST00000311895 PRKAR2BP31323 418 aa10.21□□□□□ -0.78
ERCC4-201ENST00000311895 FAM177A1Q8N128 213 aaPredicted RBP10.21□□□□□ -0.78
ERCC4-201ENST00000311895 NLRP2Q9NX02 1062 aa10.21□□□□□ -0.78
ERCC4-201ENST00000311895 HSP90AB2PQ58FF8 381 aa10.2□□□□□ -0.78
ERCC4-201ENST00000311895 CLASRPQ8N2M8 674 aaKnown RBP10.2□□□□□ -0.78
ERCC4-201ENST00000311895 RAPGEF4Q8WZA2 1011 aa10.2□□□□□ -0.78
ERCC4-201ENST00000311895 ACBD3Q9H3P7 528 aa10.2□□□□□ -0.78
ERCC4-201ENST00000311895 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
ERCC4-201ENST00000311895 ODF2Q5BJF6 829 aa10.2□□□□□ -0.78
ERCC4-201ENST00000311895 MAP7D2Q96T17 732 aa10.2□□□□□ -0.78
ERCC4-201ENST00000311895 BRD4O60885 1362 aaPredicted RBP10.2□□□□□ -0.78
ERCC4-201ENST00000311895 H0YHG0 523 aa10.2□□□□□ -0.78
ERCC4-201ENST00000311895 CCDC184Q52MB2 194 aa10.2□□□□□ -0.78
ERCC4-201ENST00000311895 SIL1Q9H173 461 aa10.2□□□□□ -0.78
ERCC4-201ENST00000311895 RBM33Q96EV2 1170 aaKnown RBP10.19□□□□□ -0.78
ERCC4-201ENST00000311895 CCDC173Q0VFZ6 552 aa10.19□□□□□ -0.78
ERCC4-201ENST00000311895 PTPRGP23470 1445 aa10.19□□□□□ -0.78
ERCC4-201ENST00000311895 TWISTNBQ3B726 338 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms