RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TBC1D32Q96NH3 1257 aa22.94■■□□□ 1.26
SPSB4-201ENST00000310546 CCDC146Q8IYE0 955 aa22.92■■□□□ 1.26
SPSB4-201ENST00000310546 SPINK5Q9NQ38 1064 aaPredicted RBP22.92■■□□□ 1.26
SPSB4-201ENST00000310546 PLEKHG5O94827 1062 aa22.92■■□□□ 1.26
SPSB4-201ENST00000310546 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
SPSB4-201ENST00000310546 CANXP27824 592 aaKnown RBP22.92■■□□□ 1.26
SPSB4-201ENST00000310546 COG6Q9Y2V7 657 aa22.92■■□□□ 1.26
SPSB4-201ENST00000310546 ZNF521Q96K83 1311 aa22.91■■□□□ 1.26
SPSB4-201ENST00000310546 KANK1Q14678 1352 aa22.91■■□□□ 1.26
SPSB4-201ENST00000310546 PDCL3Q9H2J4 239 aa22.9■■□□□ 1.26
SPSB4-201ENST00000310546 TET3O43151 1660 aa22.9■■□□□ 1.26
SPSB4-201ENST00000310546 SPHKAPQ2M3C7 1700 aa22.9■■□□□ 1.26
SPSB4-201ENST00000310546 MROH1Q8NDA8 1641 aa22.9■■□□□ 1.26
SPSB4-201ENST00000310546 CLUAP1Q96AJ1 413 aa22.9■■□□□ 1.26
SPSB4-201ENST00000310546 EIF2AK4Q9P2K8 1649 aaKnown RBP22.89■■□□□ 1.26
SPSB4-201ENST00000310546 PANK1Q8TE04 598 aa22.89■■□□□ 1.26
SPSB4-201ENST00000310546 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.25
SPSB4-201ENST00000310546 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.25
SPSB4-201ENST00000310546 DISP3Q9P2K9 1392 aa22.89■■□□□ 1.25
SPSB4-201ENST00000310546 TRPM2O94759 1503 aa22.88■■□□□ 1.25
SPSB4-201ENST00000310546 PRDM15P57071 1507 aaPredicted RBP22.88■■□□□ 1.25
SPSB4-201ENST00000310546 CHMP5Q9NZZ3 219 aa22.88■■□□□ 1.25
SPSB4-201ENST00000310546 TPM2P07951 284 aa22.87■■□□□ 1.25
SPSB4-201ENST00000310546 YEATS2Q9ULM3 1422 aa22.87■■□□□ 1.25
SPSB4-201ENST00000310546 MLH3Q9UHC1 1453 aa22.87■■□□□ 1.25
SPSB4-201ENST00000310546 VIRMAQ69YN4 1812 aaKnown RBP22.86■■□□□ 1.25
SPSB4-201ENST00000310546 CGNL1Q0VF96 1302 aa22.86■■□□□ 1.25
SPSB4-201ENST00000310546 PTPRTO14522 1441 aa22.86■■□□□ 1.25
SPSB4-201ENST00000310546 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
SPSB4-201ENST00000310546 PPP2R1AP30153 589 aa22.85■■□□□ 1.25
SPSB4-201ENST00000310546 KIAA1211Q6ZU35 1233 aa22.85■■□□□ 1.25
SPSB4-201ENST00000310546 UGGT1Q9NYU2 1555 aa22.85■■□□□ 1.25
SPSB4-201ENST00000310546 APAF1O14727 1248 aa22.84■■□□□ 1.25
SPSB4-201ENST00000310546 CEP152O94986 1710 aa22.84■■□□□ 1.25
SPSB4-201ENST00000310546 ABCA6Q8N139 1617 aa22.83■■□□□ 1.25
SPSB4-201ENST00000310546 TESK2Q96S53 571 aa22.82■■□□□ 1.24
SPSB4-201ENST00000310546 KNSTRNQ9Y448 316 aa22.81■■□□□ 1.24
SPSB4-201ENST00000310546 NKTRP30414 1462 aaKnown RBP22.81■■□□□ 1.24
SPSB4-201ENST00000310546 GPRASP1Q5JY77 1395 aa22.81■■□□□ 1.24
SPSB4-201ENST00000310546 RBM10P98175 930 aaKnown RBP22.8■■□□□ 1.24
SPSB4-201ENST00000310546 DDX11L8A8MPP1 907 aa22.8■■□□□ 1.24
SPSB4-201ENST00000310546 TMF1P82094 1093 aa22.8■■□□□ 1.24
SPSB4-201ENST00000310546 FBXO31Q5XUX0 539 aaPredicted RBP22.8■■□□□ 1.24
SPSB4-201ENST00000310546 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
SPSB4-201ENST00000310546 PDE3AQ14432 1141 aa22.79■■□□□ 1.24
SPSB4-201ENST00000310546 CFAP70Q5T0N1 1121 aa22.79■■□□□ 1.24
SPSB4-201ENST00000310546 GAS2L3Q86XJ1 694 aa22.79■■□□□ 1.24
SPSB4-201ENST00000310546 DIP2CQ9Y2E4 1556 aa22.79■■□□□ 1.24
SPSB4-201ENST00000310546 MFAP1P55081 439 aaKnown RBP22.78■■□□□ 1.24
SPSB4-201ENST00000310546 PDZRN3Q9UPQ7 1066 aa22.78■■□□□ 1.24
SPSB4-201ENST00000310546 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
SPSB4-201ENST00000310546 EFCAB6Q5THR3 1501 aa22.77■■□□□ 1.24
SPSB4-201ENST00000310546 ADGRF5Q8IZF2 1346 aa22.77■■□□□ 1.24
SPSB4-201ENST00000310546 C22orf23Q9BZE7 217 aa22.77■■□□□ 1.24
SPSB4-201ENST00000310546 E9PSI1 815 aa22.76■■□□□ 1.23
SPSB4-201ENST00000310546 CENPJQ9HC77 1338 aaPredicted RBP22.76■■□□□ 1.23
SPSB4-201ENST00000310546 ISY1Q9ULR0 285 aaKnown RBP22.75■■□□□ 1.23
SPSB4-201ENST00000310546 MADDQ8WXG6 1647 aa22.75■■□□□ 1.23
SPSB4-201ENST00000310546 RNF17Q9BXT8 1623 aaKnown RBP22.75■■□□□ 1.23
SPSB4-201ENST00000310546 PCDHB15Q9Y5E8 787 aa22.75■■□□□ 1.23
SPSB4-201ENST00000310546 LAMC1P11047 1609 aa22.75■■□□□ 1.23
SPSB4-201ENST00000310546 CALD1Q05682 793 aaKnown RBP22.74■■□□□ 1.23
SPSB4-201ENST00000310546 PMFBP1Q8TBY8 1022 aa22.74■■□□□ 1.23
SPSB4-201ENST00000310546 TMEM132EQ6IEE7 984 aa22.74■■□□□ 1.23
SPSB4-201ENST00000310546 A0A0U1RQG5 324 aaPredicted RBP22.72■■□□□ 1.23
SPSB4-201ENST00000310546 HSCBQ8IWL3 235 aa22.72■■□□□ 1.23
SPSB4-201ENST00000310546 FAM13BQ9NYF5 915 aa22.72■■□□□ 1.23
SPSB4-201ENST00000310546 ARHGEF40Q8TER5 1519 aa22.72■■□□□ 1.23
SPSB4-201ENST00000310546 PRDM4Q9UKN5 801 aa22.71■■□□□ 1.23
SPSB4-201ENST00000310546 ARID3AQ99856 593 aa22.7■■□□□ 1.22
SPSB4-201ENST00000310546 LMTK2Q8IWU2 1503 aa22.7■■□□□ 1.22
SPSB4-201ENST00000310546 SIGLEC1Q9BZZ2 1709 aa22.69■■□□□ 1.22
SPSB4-201ENST00000310546 SAFB2Q14151 953 aaKnown RBP eCLIP22.69■■□□□ 1.22
SPSB4-201ENST00000310546 KIF1BO60333 1816 aa22.68■■□□□ 1.22
SPSB4-201ENST00000310546 TNNQ9UQP3 1299 aa22.68■■□□□ 1.22
SPSB4-201ENST00000310546 IDI1Q13907 227 aa22.68■■□□□ 1.22
SPSB4-201ENST00000310546 NPATQ14207 1427 aa22.68■■□□□ 1.22
SPSB4-201ENST00000310546 TNPO1Q92973 898 aaKnown RBP22.68■■□□□ 1.22
SPSB4-201ENST00000310546 BCL2L13Q9BXK5 485 aa22.68■■□□□ 1.22
SPSB4-201ENST00000310546 MSNP26038 577 aaKnown RBP22.67■■□□□ 1.22
SPSB4-201ENST00000310546 AMER1Q5JTC6 1135 aaPredicted RBP22.67■■□□□ 1.22
SPSB4-201ENST00000310546 ZSCAN30Q86W11 494 aa22.66■■□□□ 1.22
SPSB4-201ENST00000310546 ZNF692Q9BU19 519 aaPredicted RBP22.66■■□□□ 1.22
SPSB4-201ENST00000310546 RLBP1P12271 317 aa22.66■■□□□ 1.22
SPSB4-201ENST00000310546 RIPK4P57078 832 aa22.66■■□□□ 1.22
SPSB4-201ENST00000310546 MROH2AA6NES4 1674 aa22.65■■□□□ 1.22
SPSB4-201ENST00000310546 NEUROD2Q15784 382 aa22.65■■□□□ 1.22
SPSB4-201ENST00000310546 TRAK1Q9UPV9 953 aa22.65■■□□□ 1.22
SPSB4-201ENST00000310546 ANP32BQ92688 251 aaKnown RBP22.64■■□□□ 1.22
SPSB4-201ENST00000310546 OFD1O75665 1012 aa22.64■■□□□ 1.21
SPSB4-201ENST00000310546 NASPP49321 788 aaPredicted RBP22.64■■□□□ 1.21
SPSB4-201ENST00000310546 RWDD1Q9H446 243 aaPredicted RBP22.64■■□□□ 1.21
SPSB4-201ENST00000310546 STAC3Q96MF2 364 aa22.64■■□□□ 1.21
SPSB4-201ENST00000310546 REREQ9P2R6 1566 aa22.63■■□□□ 1.21
SPSB4-201ENST00000310546 CCDC173Q0VFZ6 552 aa22.63■■□□□ 1.21
SPSB4-201ENST00000310546 GBP4Q96PP9 640 aa22.63■■□□□ 1.21
SPSB4-201ENST00000310546 R3HCC1Q9Y3T6 440 aaKnown RBP22.63■■□□□ 1.21
SPSB4-201ENST00000310546 ABCC3O15438 1527 aa22.62■■□□□ 1.21
SPSB4-201ENST00000310546 IQGAP1P46940 1657 aa22.62■■□□□ 1.21
SPSB4-201ENST00000310546 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms