RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 EIF4G2P78344 907 aaKnown RBP eCLIP17.3■□□□□ 0.36
VANGL1-201ENST00000310260 USP47Q96K76 1375 aa17.29■□□□□ 0.36
VANGL1-201ENST00000310260 HSPA5P11021 654 aaKnown RBP17.29■□□□□ 0.36
VANGL1-201ENST00000310260 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
VANGL1-201ENST00000310260 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
VANGL1-201ENST00000310260 CENPJQ9HC77 1338 aaPredicted RBP17.27■□□□□ 0.36
VANGL1-201ENST00000310260 ANP32CO43423 234 aa17.27■□□□□ 0.36
VANGL1-201ENST00000310260 NUTM2FA1L443 756 aa17.27■□□□□ 0.35
VANGL1-201ENST00000310260 TMEM94Q12767 1356 aa17.26■□□□□ 0.35
VANGL1-201ENST00000310260 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
VANGL1-201ENST00000310260 EIF3AQ14152 1382 aaKnown RBP17.25■□□□□ 0.35
VANGL1-201ENST00000310260 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
VANGL1-201ENST00000310260 POLR3GLQ9BT43 218 aa17.24■□□□□ 0.35
VANGL1-201ENST00000310260 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
VANGL1-201ENST00000310260 SIRT1Q96EB6 747 aa17.22■□□□□ 0.35
VANGL1-201ENST00000310260 TECPR2O15040 1411 aa17.21■□□□□ 0.35
VANGL1-201ENST00000310260 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
VANGL1-201ENST00000310260 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
VANGL1-201ENST00000310260 PTCH1Q13635 1447 aa17.2■□□□□ 0.34
VANGL1-201ENST00000310260 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
VANGL1-201ENST00000310260 ATF3P18847 181 aa17.19■□□□□ 0.34
VANGL1-201ENST00000310260 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
VANGL1-201ENST00000310260 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
VANGL1-201ENST00000310260 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
VANGL1-201ENST00000310260 NWD1Q149M9 1564 aa17.19■□□□□ 0.34
VANGL1-201ENST00000310260 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
VANGL1-201ENST00000310260 TESK2Q96S53 571 aa17.18■□□□□ 0.34
VANGL1-201ENST00000310260 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
VANGL1-201ENST00000310260 CPS1P31327 1500 aa17.17■□□□□ 0.34
VANGL1-201ENST00000310260 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
VANGL1-201ENST00000310260 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
VANGL1-201ENST00000310260 DLC1Q96QB1 1528 aa17.17■□□□□ 0.34
VANGL1-201ENST00000310260 LTBP4Q8N2S1 1624 aa17.17■□□□□ 0.34
VANGL1-201ENST00000310260 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
VANGL1-201ENST00000310260 MSH6P52701 1360 aa17.17■□□□□ 0.34
VANGL1-201ENST00000310260 WASLO00401 505 aaPredicted RBP17.16■□□□□ 0.34
VANGL1-201ENST00000310260 TMF1P82094 1093 aa17.15■□□□□ 0.34
VANGL1-201ENST00000310260 EVC2Q86UK5 1308 aa17.15■□□□□ 0.34
VANGL1-201ENST00000310260 KNDC1Q76NI1 1749 aa17.14■□□□□ 0.33
VANGL1-201ENST00000310260 C11orf95C9JLR9 678 aaPredicted RBP17.14■□□□□ 0.33
VANGL1-201ENST00000310260 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.14■□□□□ 0.33
VANGL1-201ENST00000310260 ERICH6BQ5W0A0 696 aa17.13■□□□□ 0.33
VANGL1-201ENST00000310260 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
VANGL1-201ENST00000310260 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
VANGL1-201ENST00000310260 QRICH2Q9H0J4 1663 aa17.12■□□□□ 0.33
VANGL1-201ENST00000310260 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
VANGL1-201ENST00000310260 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
VANGL1-201ENST00000310260 DISP3Q9P2K9 1392 aa17.12■□□□□ 0.33
VANGL1-201ENST00000310260 HNRNPUQ00839 825 aaKnown RBP eCLIP17.12■□□□□ 0.33
VANGL1-201ENST00000310260 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
VANGL1-201ENST00000310260 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
VANGL1-201ENST00000310260 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
VANGL1-201ENST00000310260 SLAIN2Q9P270 581 aa17.1■□□□□ 0.33
VANGL1-201ENST00000310260 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
VANGL1-201ENST00000310260 PMFBP1Q8TBY8 1022 aa17.09■□□□□ 0.33
VANGL1-201ENST00000310260 ORAI2Q96SN7 254 aa17.09■□□□□ 0.33
VANGL1-201ENST00000310260 NALCNQ8IZF0 1738 aa17.09■□□□□ 0.33
VANGL1-201ENST00000310260 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
VANGL1-201ENST00000310260 XIRP1Q702N8 1843 aaKnown RBP17.08■□□□□ 0.32
VANGL1-201ENST00000310260 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
VANGL1-201ENST00000310260 TOM1O60784 492 aa17.07■□□□□ 0.32
VANGL1-201ENST00000310260 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
VANGL1-201ENST00000310260 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
VANGL1-201ENST00000310260 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
VANGL1-201ENST00000310260 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
VANGL1-201ENST00000310260 SLC12A5Q9H2X9 1139 aa17.05■□□□□ 0.32
VANGL1-201ENST00000310260 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
VANGL1-201ENST00000310260 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
VANGL1-201ENST00000310260 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
VANGL1-201ENST00000310260 KIF7Q2M1P5 1343 aa17.05■□□□□ 0.32
VANGL1-201ENST00000310260 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
VANGL1-201ENST00000310260 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
VANGL1-201ENST00000310260 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
VANGL1-201ENST00000310260 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
VANGL1-201ENST00000310260 FOXO3O43524 673 aa17.03■□□□□ 0.32
VANGL1-201ENST00000310260 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.32
VANGL1-201ENST00000310260 MST1RQ04912 1400 aa17.01■□□□□ 0.31
VANGL1-201ENST00000310260 C1orf167Q5SNV9 1468 aa17.01■□□□□ 0.31
VANGL1-201ENST00000310260 DCCP43146 1447 aa17■□□□□ 0.31
VANGL1-201ENST00000310260 BRINP3Q76B58 766 aa17■□□□□ 0.31
VANGL1-201ENST00000310260 CDC42BPGQ6DT37 1551 aa17■□□□□ 0.31
VANGL1-201ENST00000310260 PAK3O75914 559 aaPredicted RBP17■□□□□ 0.31
VANGL1-201ENST00000310260 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
VANGL1-201ENST00000310260 PPIP5K1Q6PFW1 1433 aa16.99■□□□□ 0.31
VANGL1-201ENST00000310260 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
VANGL1-201ENST00000310260 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
VANGL1-201ENST00000310260 NBR1Q14596 966 aa16.99■□□□□ 0.31
VANGL1-201ENST00000310260 ANO8Q9HCE9 1232 aaPredicted RBP16.99■□□□□ 0.31
VANGL1-201ENST00000310260 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
VANGL1-201ENST00000310260 PSME1Q06323 249 aa16.99■□□□□ 0.31
VANGL1-201ENST00000310260 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
VANGL1-201ENST00000310260 ACEP12821 1306 aa16.98■□□□□ 0.31
VANGL1-201ENST00000310260 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
VANGL1-201ENST00000310260 RGPD8O14715 1765 aaPredicted RBP16.97■□□□□ 0.31
VANGL1-201ENST00000310260 ATP7BP35670 1465 aa16.97■□□□□ 0.31
VANGL1-201ENST00000310260 FMN2Q9NZ56 1722 aa16.97■□□□□ 0.31
VANGL1-201ENST00000310260 LMOD2Q6P5Q4 547 aa16.96■□□□□ 0.31
VANGL1-201ENST00000310260 PANK3Q9H999 370 aa16.96■□□□□ 0.31
VANGL1-201ENST00000310260 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
VANGL1-201ENST00000310260 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms