RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
CCDC13-201ENST00000310232 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
CCDC13-201ENST00000310232 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
CCDC13-201ENST00000310232 U2AF1L5P0DN76 240 aaPredicted RBP17.12■□□□□ 0.33
CCDC13-201ENST00000310232 U2AF1Q01081 240 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC13-201ENST00000310232 ABCA6Q8N139 1617 aa17.12■□□□□ 0.33
CCDC13-201ENST00000310232 SCAPERQ9BY12 1400 aa17.12■□□□□ 0.33
CCDC13-201ENST00000310232 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
CCDC13-201ENST00000310232 MCM4P33991 863 aa17.11■□□□□ 0.33
CCDC13-201ENST00000310232 FTSJ3Q8IY81 847 aaKnown RBP17.11■□□□□ 0.33
CCDC13-201ENST00000310232 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
CCDC13-201ENST00000310232 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
CCDC13-201ENST00000310232 UBE2Q2Q8WVN8 375 aa17.1■□□□□ 0.33
CCDC13-201ENST00000310232 PLCH2O75038 1416 aa17.09■□□□□ 0.33
CCDC13-201ENST00000310232 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
CCDC13-201ENST00000310232 ITPRIPQ8IWB1 547 aa17.09■□□□□ 0.33
CCDC13-201ENST00000310232 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-201ENST00000310232 GOLGA6L3A6NEY3 463 aa17.08■□□□□ 0.33
CCDC13-201ENST00000310232 EXOSC9Q06265 439 aaKnown RBP17.08■□□□□ 0.33
CCDC13-201ENST00000310232 RSPH6AQ9H0K4 717 aa17.08■□□□□ 0.33
CCDC13-201ENST00000310232 CHD1O14646 1710 aa17.08■□□□□ 0.32
CCDC13-201ENST00000310232 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
CCDC13-201ENST00000310232 SMC4Q9NTJ3 1288 aa17.07■□□□□ 0.32
CCDC13-201ENST00000310232 ABCC1P33527 1531 aa17.07■□□□□ 0.32
CCDC13-201ENST00000310232 PTPRTO14522 1441 aa17.07■□□□□ 0.32
CCDC13-201ENST00000310232 TRIM27P14373 513 aa17.07■□□□□ 0.32
CCDC13-201ENST00000310232 TRAK2O60296 914 aa17.06■□□□□ 0.32
CCDC13-201ENST00000310232 DZIP1LQ8IYY4 767 aaKnown RBP17.06■□□□□ 0.32
CCDC13-201ENST00000310232 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
CCDC13-201ENST00000310232 RTEL1-TNFRSF6BF6WH68 1400 aa17.06■□□□□ 0.32
CCDC13-201ENST00000310232 NOS1P29475 1434 aa17.06■□□□□ 0.32
CCDC13-201ENST00000310232 SSH1Q8WYL5 1049 aa17.05■□□□□ 0.32
CCDC13-201ENST00000310232 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
CCDC13-201ENST00000310232 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
CCDC13-201ENST00000310232 MROH2AA6NES4 1674 aa17.04■□□□□ 0.32
CCDC13-201ENST00000310232 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
CCDC13-201ENST00000310232 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-201ENST00000310232 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
CCDC13-201ENST00000310232 MAP3K4Q9Y6R4 1608 aa17.04■□□□□ 0.32
CCDC13-201ENST00000310232 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
CCDC13-201ENST00000310232 ZFYVE16Q7Z3T8 1539 aa17.03■□□□□ 0.32
CCDC13-201ENST00000310232 FBLN1P23142 703 aa17.03■□□□□ 0.32
CCDC13-201ENST00000310232 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
CCDC13-201ENST00000310232 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
CCDC13-201ENST00000310232 FSD2A1L4K1 749 aa17.02■□□□□ 0.32
CCDC13-201ENST00000310232 TMEM57Q8N5G2 664 aa17.02■□□□□ 0.32
CCDC13-201ENST00000310232 GGNBP2Q9H3C7 697 aa17.02■□□□□ 0.32
CCDC13-201ENST00000310232 WDR63Q8IWG1 891 aa17.02■□□□□ 0.31
CCDC13-201ENST00000310232 C1orf115Q9H7X2 142 aa17.02■□□□□ 0.31
CCDC13-201ENST00000310232 CD2BP2O95400 341 aaKnown RBP17.01■□□□□ 0.31
CCDC13-201ENST00000310232 ERBB4Q15303 1308 aa17.01■□□□□ 0.31
CCDC13-201ENST00000310232 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
CCDC13-201ENST00000310232 AK9Q5TCS8 1911 aa17■□□□□ 0.31
CCDC13-201ENST00000310232 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
CCDC13-201ENST00000310232 CHMP5Q9NZZ3 219 aa17■□□□□ 0.31
CCDC13-201ENST00000310232 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
CCDC13-201ENST00000310232 KANK1Q14678 1352 aa16.99■□□□□ 0.31
CCDC13-201ENST00000310232 TET3O43151 1660 aa16.99■□□□□ 0.31
CCDC13-201ENST00000310232 GAS2L3Q86XJ1 694 aa16.99■□□□□ 0.31
CCDC13-201ENST00000310232 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
CCDC13-201ENST00000310232 ZNF518AQ6AHZ1 1483 aa16.99■□□□□ 0.31
CCDC13-201ENST00000310232 STK26Q9P289 416 aa16.98■□□□□ 0.31
CCDC13-201ENST00000310232 GGT6Q6P531 493 aa16.97■□□□□ 0.31
CCDC13-201ENST00000310232 HSCBQ8IWL3 235 aa16.97■□□□□ 0.31
CCDC13-201ENST00000310232 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
CCDC13-201ENST00000310232 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
CCDC13-201ENST00000310232 KIF1BO60333 1816 aa16.97■□□□□ 0.31
CCDC13-201ENST00000310232 CD109Q6YHK3 1445 aa16.97■□□□□ 0.31
CCDC13-201ENST00000310232 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
CCDC13-201ENST00000310232 PNNQ9H307 717 aaKnown RBP16.97■□□□□ 0.31
CCDC13-201ENST00000310232 SHROOM2Q13796 1616 aa16.96■□□□□ 0.31
CCDC13-201ENST00000310232 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.3
CCDC13-201ENST00000310232 SLC24A1O60721 1099 aa16.96■□□□□ 0.3
CCDC13-201ENST00000310232 TNPO1Q92973 898 aaKnown RBP16.96■□□□□ 0.3
CCDC13-201ENST00000310232 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
CCDC13-201ENST00000310232 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
CCDC13-201ENST00000310232 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
CCDC13-201ENST00000310232 GRPEL1Q9HAV7 217 aa16.95■□□□□ 0.3
CCDC13-201ENST00000310232 QRICH2Q9H0J4 1663 aa16.95■□□□□ 0.3
CCDC13-201ENST00000310232 KIAA1210Q9ULL0 1709 aa16.95■□□□□ 0.3
CCDC13-201ENST00000310232 DEPDC5O75140 1603 aa16.94■□□□□ 0.3
CCDC13-201ENST00000310232 ATP7AQ04656 1500 aa16.94■□□□□ 0.3
CCDC13-201ENST00000310232 RIPK4P57078 832 aa16.93■□□□□ 0.3
CCDC13-201ENST00000310232 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
CCDC13-201ENST00000310232 MROH1Q8NDA8 1641 aa16.92■□□□□ 0.3
CCDC13-201ENST00000310232 CCDC27Q2M243 656 aa16.92■□□□□ 0.3
CCDC13-201ENST00000310232 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
CCDC13-201ENST00000310232 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
CCDC13-201ENST00000310232 ZBTB40Q9NUA8 1239 aa16.91■□□□□ 0.3
CCDC13-201ENST00000310232 MYOM2P54296 1465 aa16.91■□□□□ 0.3
CCDC13-201ENST00000310232 SMC5Q8IY18 1101 aa16.91■□□□□ 0.3
CCDC13-201ENST00000310232 DDX19BQ9UMR2 479 aa16.91■□□□□ 0.3
CCDC13-201ENST00000310232 PPRC1Q5VV67 1664 aaKnown RBP16.91■□□□□ 0.3
CCDC13-201ENST00000310232 IFT172Q9UG01 1749 aa16.91■□□□□ 0.3
CCDC13-201ENST00000310232 HDAC1Q13547 482 aaPredicted RBP16.9■□□□□ 0.3
CCDC13-201ENST00000310232 ANKRD45Q5TZF3 282 aa16.9■□□□□ 0.3
CCDC13-201ENST00000310232 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
CCDC13-201ENST00000310232 FANCAO15360 1455 aa16.9■□□□□ 0.3
CCDC13-201ENST00000310232 CLCN1P35523 988 aa16.9■□□□□ 0.3
CCDC13-201ENST00000310232 KIF2CQ99661 725 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms