RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CANXP27824 592 aaKnown RBP7.8□□□□□ -1.16
SEC22A-201ENST00000309934 LRPPRCP42704 1394 aaKnown RBP7.8□□□□□ -1.16
SEC22A-201ENST00000309934 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
SEC22A-201ENST00000309934 SYNMO15061 1565 aa7.8□□□□□ -1.16
SEC22A-201ENST00000309934 PLA2R1Q13018 1463 aa7.8□□□□□ -1.16
SEC22A-201ENST00000309934 CDK11BP21127 795 aaKnown RBP7.79□□□□□ -1.16
SEC22A-201ENST00000309934 RICTORQ6R327 1708 aa7.79□□□□□ -1.16
SEC22A-201ENST00000309934 ADGRF5Q8IZF2 1346 aa7.79□□□□□ -1.16
SEC22A-201ENST00000309934 CLTCL1P53675 1640 aa7.79□□□□□ -1.16
SEC22A-201ENST00000309934 PIK3R4Q99570 1358 aa7.78□□□□□ -1.16
SEC22A-201ENST00000309934 TRPM1Q7Z4N2 1603 aa7.78□□□□□ -1.16
SEC22A-201ENST00000309934 COG3Q96JB2 828 aa7.78□□□□□ -1.16
SEC22A-201ENST00000309934 MYH16Q9H6N6 1097 aa7.78□□□□□ -1.16
SEC22A-201ENST00000309934 PIK3C2GO75747 1445 aa7.78□□□□□ -1.16
SEC22A-201ENST00000309934 TBX22Q9Y458 520 aa7.77□□□□□ -1.16
SEC22A-201ENST00000309934 PPRC1Q5VV67 1664 aaKnown RBP7.77□□□□□ -1.17
SEC22A-201ENST00000309934 TSPOAP1O95153 1857 aa7.77□□□□□ -1.17
SEC22A-201ENST00000309934 ASXL1Q8IXJ9 1541 aa7.77□□□□□ -1.17
SEC22A-201ENST00000309934 UGGT1Q9NYU2 1555 aa7.77□□□□□ -1.17
SEC22A-201ENST00000309934 PRAM1Q96QH2 718 aa7.76□□□□□ -1.17
SEC22A-201ENST00000309934 KDM5AP29375 1690 aaKnown RBP7.76□□□□□ -1.17
SEC22A-201ENST00000309934 ANKRD36BQ8N2N9 1353 aa7.76□□□□□ -1.17
SEC22A-201ENST00000309934 ABCC11Q96J66 1382 aa7.76□□□□□ -1.17
SEC22A-201ENST00000309934 TMEM2Q9UHN6 1383 aa7.76□□□□□ -1.17
SEC22A-201ENST00000309934 MADDQ8WXG6 1647 aa7.76□□□□□ -1.17
SEC22A-201ENST00000309934 YTHDC2Q9H6S0 1430 aaKnown RBP7.76□□□□□ -1.17
SEC22A-201ENST00000309934 PLEKHG1Q9ULL1 1385 aa7.76□□□□□ -1.17
SEC22A-201ENST00000309934 NCLP19338 710 aaKnown RBP7.76□□□□□ -1.17
SEC22A-201ENST00000309934 ZBTB47Q9UFB7 747 aaPredicted RBP7.76□□□□□ -1.17
SEC22A-201ENST00000309934 MINK1Q8N4C8 1332 aaPredicted RBP7.76□□□□□ -1.17
SEC22A-201ENST00000309934 AAMPQ13685 434 aa7.76□□□□□ -1.17
SEC22A-201ENST00000309934 TPRNQ4KMQ1 711 aa7.76□□□□□ -1.17
SEC22A-201ENST00000309934 NGDNQ8NEJ9 315 aaKnown RBP7.76□□□□□ -1.17
SEC22A-201ENST00000309934 DMRT2Q9Y5R5 561 aa7.75□□□□□ -1.17
SEC22A-201ENST00000309934 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
SEC22A-201ENST00000309934 NRXN1Q9ULB1 1477 aa7.75□□□□□ -1.17
SEC22A-201ENST00000309934 SPATA31D1Q6ZQQ2 1576 aa7.75□□□□□ -1.17
SEC22A-201ENST00000309934 CCDC61Q9Y6R9 512 aa7.74□□□□□ -1.17
SEC22A-201ENST00000309934 FBXO31Q5XUX0 539 aaPredicted RBP7.74□□□□□ -1.17
SEC22A-201ENST00000309934 CDK19Q9BWU1 502 aa7.74□□□□□ -1.17
SEC22A-201ENST00000309934 FRMPD1Q5SYB0 1578 aa7.74□□□□□ -1.17
SEC22A-201ENST00000309934 PAXIP1Q6ZW49 1069 aaPredicted RBP7.74□□□□□ -1.17
SEC22A-201ENST00000309934 TESK2Q96S53 571 aa7.74□□□□□ -1.17
SEC22A-201ENST00000309934 ZMYND15Q9H091 742 aa7.74□□□□□ -1.17
SEC22A-201ENST00000309934 DLC1Q96QB1 1528 aa7.74□□□□□ -1.17
SEC22A-201ENST00000309934 TNNT2P45379 298 aaPredicted RBP7.73□□□□□ -1.17
SEC22A-201ENST00000309934 PSME1Q06323 249 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 TSHZ2Q9NRE2 1034 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 PARD3Q8TEW0 1356 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 GOLGA2Q08379 1002 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 SAFB2Q14151 953 aaKnown RBP eCLIP7.73□□□□□ -1.17
SEC22A-201ENST00000309934 TMEM132EQ6IEE7 984 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 E9PSI1 815 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 WASLO00401 505 aaPredicted RBP7.73□□□□□ -1.17
SEC22A-201ENST00000309934 NUTM2DQ5VT03 806 aaPredicted RBP7.73□□□□□ -1.17
SEC22A-201ENST00000309934 DHX37Q8IY37 1157 aaKnown RBP7.73□□□□□ -1.17
SEC22A-201ENST00000309934 TTC21AQ8NDW8 1320 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 A2ML1A8K2U0 1454 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 MROH1Q8NDA8 1641 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 PPP2R1AP30153 589 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 RUNDC1Q96C34 613 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 PPP4R2Q9NY27 417 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 MROH2AA6NES4 1674 aa7.73□□□□□ -1.17
SEC22A-201ENST00000309934 CT47B1P0C2W7 299 aaPredicted RBP7.72□□□□□ -1.17
SEC22A-201ENST00000309934 PREX1Q8TCU6 1659 aa7.72□□□□□ -1.17
SEC22A-201ENST00000309934 IFT172Q9UG01 1749 aa7.72□□□□□ -1.17
SEC22A-201ENST00000309934 FKBP8Q14318 412 aa7.72□□□□□ -1.17
SEC22A-201ENST00000309934 DISP3Q9P2K9 1392 aa7.72□□□□□ -1.17
SEC22A-201ENST00000309934 DIP2AQ14689 1571 aa7.72□□□□□ -1.17
SEC22A-201ENST00000309934 NSD3Q9BZ95 1437 aa7.72□□□□□ -1.17
SEC22A-201ENST00000309934 DIAPH1O60610 1272 aaKnown RBP7.72□□□□□ -1.17
SEC22A-201ENST00000309934 IPO8O15397 1037 aaKnown RBP7.71□□□□□ -1.17
SEC22A-201ENST00000309934 U2AF1L5P0DN76 240 aaPredicted RBP7.71□□□□□ -1.18
SEC22A-201ENST00000309934 U2AF1Q01081 240 aaKnown RBP eCLIP7.71□□□□□ -1.18
SEC22A-201ENST00000309934 U2SURPO15042 1029 aaKnown RBP7.71□□□□□ -1.18
SEC22A-201ENST00000309934 ATF3P18847 181 aa7.71□□□□□ -1.18
SEC22A-201ENST00000309934 PHF23Q9BUL5 403 aaPredicted RBP7.71□□□□□ -1.18
SEC22A-201ENST00000309934 TAOK2Q9UL54 1235 aa7.71□□□□□ -1.18
SEC22A-201ENST00000309934 CLTCQ00610 1675 aaKnown RBP7.7□□□□□ -1.18
SEC22A-201ENST00000309934 HSP90AA2PQ14568 343 aaPredicted RBP7.7□□□□□ -1.18
SEC22A-201ENST00000309934 PNISRQ8TF01 805 aaKnown RBP7.7□□□□□ -1.18
SEC22A-201ENST00000309934 RSPH6AQ9H0K4 717 aa7.7□□□□□ -1.18
SEC22A-201ENST00000309934 ATP7BP35670 1465 aa7.7□□□□□ -1.18
SEC22A-201ENST00000309934 NUDT16Q96DE0 195 aaKnown RBP7.7□□□□□ -1.18
SEC22A-201ENST00000309934 CABP2Q9NPB3 220 aa7.7□□□□□ -1.18
SEC22A-201ENST00000309934 POLR3AO14802 1390 aaPredicted RBP7.69□□□□□ -1.18
SEC22A-201ENST00000309934 RTF1Q92541 710 aaKnown RBP7.69□□□□□ -1.18
SEC22A-201ENST00000309934 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
SEC22A-201ENST00000309934 RBM10P98175 930 aaKnown RBP7.69□□□□□ -1.18
SEC22A-201ENST00000309934 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
SEC22A-201ENST00000309934 HDAC5Q9UQL6 1122 aa7.69□□□□□ -1.18
SEC22A-201ENST00000309934 NEXMIFQ5QGS0 1516 aa7.69□□□□□ -1.18
SEC22A-201ENST00000309934 KCNH5Q8NCM2 988 aa7.68□□□□□ -1.18
SEC22A-201ENST00000309934 ZNF428Q96B54 188 aa7.68□□□□□ -1.18
SEC22A-201ENST00000309934 AMPHP49418 695 aa7.68□□□□□ -1.18
SEC22A-201ENST00000309934 RCAN3Q9UKA8 241 aa7.68□□□□□ -1.18
SEC22A-201ENST00000309934 AMOTL2Q9Y2J4 779 aa7.68□□□□□ -1.18
SEC22A-201ENST00000309934 IQGAP1P46940 1657 aa7.68□□□□□ -1.18
SEC22A-201ENST00000309934 EDC4Q6P2E9 1401 aaKnown RBP7.68□□□□□ -1.18
SEC22A-201ENST00000309934 PIK3C2BO00750 1634 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 646.8 ms