RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 QRICH2Q9H0J4 1663 aa27.05■■□□□ 1.92
RELA-201ENST00000308639 FAM161AQ3B820 660 aa27.05■■□□□ 1.92
RELA-201ENST00000308639 FRAT1Q92837 279 aaPredicted RBP27.05■■□□□ 1.92
RELA-201ENST00000308639 LMTK2Q8IWU2 1503 aa27.05■■□□□ 1.92
RELA-201ENST00000308639 TNNQ9UQP3 1299 aa27.04■■□□□ 1.92
RELA-201ENST00000308639 RAPGEF3O95398 923 aa27.03■■□□□ 1.92
RELA-201ENST00000308639 CANXP27824 592 aaKnown RBP27.03■■□□□ 1.92
RELA-201ENST00000308639 MTHFSP49914 203 aa27.03■■□□□ 1.92
RELA-201ENST00000308639 PPLO60437 1756 aa27.03■■□□□ 1.92
RELA-201ENST00000308639 ADGRB1O14514 1584 aa27.03■■□□□ 1.92
RELA-201ENST00000308639 NPM1P06748 294 aaKnown RBP eCLIP27.03■■□□□ 1.92
RELA-201ENST00000308639 TCP11L2Q8N4U5 519 aa27.03■■□□□ 1.92
RELA-201ENST00000308639 SHPRHQ149N8 1683 aa27.03■■□□□ 1.92
RELA-201ENST00000308639 BCL2L13Q9BXK5 485 aa27.03■■□□□ 1.92
RELA-201ENST00000308639 CD109Q6YHK3 1445 aa27.03■■□□□ 1.92
RELA-201ENST00000308639 POGZQ7Z3K3 1410 aa27.01■■□□□ 1.91
RELA-201ENST00000308639 SETBP1Q9Y6X0 1596 aa27■■□□□ 1.91
RELA-201ENST00000308639 ZC3H13Q5T200 1668 aaKnown RBP26.99■■□□□ 1.91
RELA-201ENST00000308639 DDRGK1Q96HY6 314 aa26.99■■□□□ 1.91
RELA-201ENST00000308639 CABP2Q9NPB3 220 aa26.99■■□□□ 1.91
RELA-201ENST00000308639 RUNDC1Q96C34 613 aa26.98■■□□□ 1.91
RELA-201ENST00000308639 STK26Q9P289 416 aa26.95■■□□□ 1.91
RELA-201ENST00000308639 SIGLEC1Q9BZZ2 1709 aa26.95■■□□□ 1.9
RELA-201ENST00000308639 ABCC3O15438 1527 aa26.94■■□□□ 1.9
RELA-201ENST00000308639 RLBP1P12271 317 aa26.93■■□□□ 1.9
RELA-201ENST00000308639 CLUAP1Q96AJ1 413 aa26.93■■□□□ 1.9
RELA-201ENST00000308639 CGNL1Q0VF96 1302 aa26.93■■□□□ 1.9
RELA-201ENST00000308639 RARSP54136 660 aaKnown RBP26.93■■□□□ 1.9
RELA-201ENST00000308639 HECW2Q9P2P5 1572 aa26.92■■□□□ 1.9
RELA-201ENST00000308639 PDE3AQ14432 1141 aa26.92■■□□□ 1.9
RELA-201ENST00000308639 MLH3Q9UHC1 1453 aa26.91■■□□□ 1.9
RELA-201ENST00000308639 PPM1GO15355 546 aaPredicted RBP26.91■■□□□ 1.9
RELA-201ENST00000308639 GLI2P10070 1586 aa26.91■■□□□ 1.9
RELA-201ENST00000308639 IQSEC2Q5JU85 1478 aa26.9■■□□□ 1.9
RELA-201ENST00000308639 TULP4Q9NRJ4 1543 aa26.9■■□□□ 1.9
RELA-201ENST00000308639 U2AF1L5P0DN76 240 aaPredicted RBP26.9■■□□□ 1.9
RELA-201ENST00000308639 U2AF1Q01081 240 aaKnown RBP eCLIP26.9■■□□□ 1.9
RELA-201ENST00000308639 NGEFQ8N5V2 710 aa26.9■■□□□ 1.9
RELA-201ENST00000308639 DAXXQ9UER7 740 aaPredicted RBP26.88■■□□□ 1.89
RELA-201ENST00000308639 EVC2Q86UK5 1308 aa26.88■■□□□ 1.89
RELA-201ENST00000308639 SEC24BO95487 1268 aa26.88■■□□□ 1.89
RELA-201ENST00000308639 IDI1Q13907 227 aa26.88■■□□□ 1.89
RELA-201ENST00000308639 PHF23Q9BUL5 403 aaPredicted RBP26.87■■□□□ 1.89
RELA-201ENST00000308639 RPGRIP1LQ68CZ1 1315 aa26.87■■□□□ 1.89
RELA-201ENST00000308639 PCDHB15Q9Y5E8 787 aa26.86■■□□□ 1.89
RELA-201ENST00000308639 CAMSAP1Q5T5Y3 1602 aa26.86■■□□□ 1.89
RELA-201ENST00000308639 CFAP53Q96M91 514 aa26.86■■□□□ 1.89
RELA-201ENST00000308639 GGNBP2Q9H3C7 697 aa26.85■■□□□ 1.89
RELA-201ENST00000308639 NFKBIBQ15653 356 aa26.85■■□□□ 1.89
RELA-201ENST00000308639 ARHGEF28Q8N1W1 1705 aaKnown RBP26.84■■□□□ 1.89
RELA-201ENST00000308639 VGFO15240 615 aaPredicted RBP26.84■■□□□ 1.89
RELA-201ENST00000308639 TSR2Q969E8 191 aaKnown RBP26.83■■□□□ 1.89
RELA-201ENST00000308639 NEXMIFQ5QGS0 1516 aa26.83■■□□□ 1.89
RELA-201ENST00000308639 SRPK2P78362 688 aaKnown RBP26.83■■□□□ 1.89
RELA-201ENST00000308639 USP35Q9P2H5 1018 aa26.83■■□□□ 1.89
RELA-201ENST00000308639 ANKRD36BQ8N2N9 1353 aa26.83■■□□□ 1.89
RELA-201ENST00000308639 U2SURPO15042 1029 aaKnown RBP26.81■■□□□ 1.88
RELA-201ENST00000308639 WDR63Q8IWG1 891 aa26.81■■□□□ 1.88
RELA-201ENST00000308639 USP19O94966 1318 aa26.81■■□□□ 1.88
RELA-201ENST00000308639 MINK1Q8N4C8 1332 aaPredicted RBP26.8■■□□□ 1.88
RELA-201ENST00000308639 A0A1W2PP64 1363 aa26.8■■□□□ 1.88
RELA-201ENST00000308639 CFAP74Q9C0B2 1584 aa26.78■■□□□ 1.88
RELA-201ENST00000308639 USP32Q8NFA0 1604 aa26.78■■□□□ 1.88
RELA-201ENST00000308639 NINLQ9Y2I6 1382 aa26.77■■□□□ 1.88
RELA-201ENST00000308639 PIK3C2BO00750 1634 aa26.76■■□□□ 1.87
RELA-201ENST00000308639 IL27Q8NEV9 243 aa26.76■■□□□ 1.87
RELA-201ENST00000308639 YEATS2Q9ULM3 1422 aa26.75■■□□□ 1.87
RELA-201ENST00000308639 MYO5BQ9ULV0 1848 aa26.75■■□□□ 1.87
RELA-201ENST00000308639 DIP2CQ9Y2E4 1556 aa26.74■■□□□ 1.87
RELA-201ENST00000308639 CCDC27Q2M243 656 aa26.73■■□□□ 1.87
RELA-201ENST00000308639 PRAM1Q96QH2 718 aa26.73■■□□□ 1.87
RELA-201ENST00000308639 FBXO31Q5XUX0 539 aaPredicted RBP26.73■■□□□ 1.87
RELA-201ENST00000308639 PDZRN3Q9UPQ7 1066 aa26.73■■□□□ 1.87
RELA-201ENST00000308639 FRAT2O75474 233 aaPredicted RBP26.72■■□□□ 1.87
RELA-201ENST00000308639 MYH16Q9H6N6 1097 aa26.72■■□□□ 1.87
RELA-201ENST00000308639 MAPK8IP3Q9UPT6 1336 aa26.71■■□□□ 1.87
RELA-201ENST00000308639 FBLN1P23142 703 aa26.71■■□□□ 1.87
RELA-201ENST00000308639 EXOSC9Q06265 439 aaKnown RBP26.71■■□□□ 1.87
RELA-201ENST00000308639 VIRMAQ69YN4 1812 aaKnown RBP26.7■■□□□ 1.86
RELA-201ENST00000308639 FYB1O15117 783 aa26.69■■□□□ 1.86
RELA-201ENST00000308639 PMFBP1Q8TBY8 1022 aa26.69■■□□□ 1.86
RELA-201ENST00000308639 PLEKHF1Q96S99 279 aa26.69■■□□□ 1.86
RELA-201ENST00000308639 ABCC11Q96J66 1382 aa26.69■■□□□ 1.86
RELA-201ENST00000308639 POGKQ9P215 609 aa26.68■■□□□ 1.86
RELA-201ENST00000308639 TRIM35Q9UPQ4 493 aa26.68■■□□□ 1.86
RELA-201ENST00000308639 NSD2O96028 1365 aa26.68■■□□□ 1.86
RELA-201ENST00000308639 TMPOP42166 694 aaKnown RBP26.68■■□□□ 1.86
RELA-201ENST00000308639 RTN4Q9NQC3 1192 aaKnown RBP26.67■■□□□ 1.86
RELA-201ENST00000308639 PUS7Q96PZ0 661 aaKnown RBP26.67■■□□□ 1.86
RELA-201ENST00000308639 SMC4Q9NTJ3 1288 aa26.66■■□□□ 1.86
RELA-201ENST00000308639 MVPQ14764 893 aaKnown RBP26.66■■□□□ 1.86
RELA-201ENST00000308639 FTSJ3Q8IY81 847 aaKnown RBP26.66■■□□□ 1.86
RELA-201ENST00000308639 ADGRB2O60241 1585 aa26.65■■□□□ 1.86
RELA-201ENST00000308639 ZKSCAN2Q63HK3 967 aa26.65■■□□□ 1.86
RELA-201ENST00000308639 PTPRMP28827 1452 aa26.64■■□□□ 1.86
RELA-201ENST00000308639 SSH1Q8WYL5 1049 aa26.64■■□□□ 1.86
RELA-201ENST00000308639 NEO1Q92859 1461 aa26.64■■□□□ 1.85
RELA-201ENST00000308639 GSE1Q14687 1217 aa26.63■■□□□ 1.85
RELA-201ENST00000308639 DZIP1LQ8IYY4 767 aaKnown RBP26.63■■□□□ 1.85
RELA-201ENST00000308639 SLC52A1Q9NWF4 448 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms