RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
MUC4-201ENST00000308466 TTC37Q6PGP7 1564 aa13.56□□□□□ -0.24
MUC4-201ENST00000308466 HDGFP51858 240 aaKnown RBP13.56□□□□□ -0.24
MUC4-201ENST00000308466 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
MUC4-201ENST00000308466 EXOSC9Q06265 439 aaKnown RBP13.55□□□□□ -0.24
MUC4-201ENST00000308466 DZIP1LQ8IYY4 767 aaKnown RBP13.55□□□□□ -0.24
MUC4-201ENST00000308466 ARID3AQ99856 593 aa13.55□□□□□ -0.24
MUC4-201ENST00000308466 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
MUC4-201ENST00000308466 APBB1O00213 710 aa13.55□□□□□ -0.24
MUC4-201ENST00000308466 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
MUC4-201ENST00000308466 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
MUC4-201ENST00000308466 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
MUC4-201ENST00000308466 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
MUC4-201ENST00000308466 WAPLQ7Z5K2 1190 aa13.52□□□□□ -0.25
MUC4-201ENST00000308466 ADCY10Q96PN6 1610 aa13.51□□□□□ -0.25
MUC4-201ENST00000308466 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
MUC4-201ENST00000308466 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
MUC4-201ENST00000308466 FBLN1P23142 703 aa13.51□□□□□ -0.25
MUC4-201ENST00000308466 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
MUC4-201ENST00000308466 CFAP65Q6ZU64 1925 aaKnown RBP13.51□□□□□ -0.25
MUC4-201ENST00000308466 ASXL1Q8IXJ9 1541 aa13.51□□□□□ -0.25
MUC4-201ENST00000308466 COG3Q96JB2 828 aa13.5□□□□□ -0.25
MUC4-201ENST00000308466 PRKAR2BP31323 418 aa13.5□□□□□ -0.25
MUC4-201ENST00000308466 GSE1Q14687 1217 aa13.5□□□□□ -0.25
MUC4-201ENST00000308466 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
MUC4-201ENST00000308466 MAGI2Q86UL8 1455 aa13.49□□□□□ -0.25
MUC4-201ENST00000308466 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
MUC4-201ENST00000308466 WDR63Q8IWG1 891 aa13.49□□□□□ -0.25
MUC4-201ENST00000308466 PREX2Q70Z35 1606 aa13.49□□□□□ -0.25
MUC4-201ENST00000308466 PDZRN3Q9UPQ7 1066 aa13.49□□□□□ -0.25
MUC4-201ENST00000308466 KDM5DQ9BY66 1539 aa13.49□□□□□ -0.25
MUC4-201ENST00000308466 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
MUC4-201ENST00000308466 IGHDP01880 384 aa13.48□□□□□ -0.25
MUC4-201ENST00000308466 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
MUC4-201ENST00000308466 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
MUC4-201ENST00000308466 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
MUC4-201ENST00000308466 DDX19BQ9UMR2 479 aa13.47□□□□□ -0.25
MUC4-201ENST00000308466 ATP10AO60312 1499 aa13.47□□□□□ -0.25
MUC4-201ENST00000308466 TMPOP42166 694 aaKnown RBP13.47□□□□□ -0.25
MUC4-201ENST00000308466 CHMP4BQ9H444 224 aaKnown RBP13.47□□□□□ -0.25
MUC4-201ENST00000308466 MYO5CQ9NQX4 1742 aa13.47□□□□□ -0.25
MUC4-201ENST00000308466 ANKRD45Q5TZF3 282 aa13.47□□□□□ -0.25
MUC4-201ENST00000308466 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
MUC4-201ENST00000308466 NFKBIBQ15653 356 aa13.46□□□□□ -0.25
MUC4-201ENST00000308466 LNPKQ9C0E8 428 aa13.46□□□□□ -0.25
MUC4-201ENST00000308466 THUMPD2Q9BTF0 503 aaKnown RBP13.46□□□□□ -0.25
MUC4-201ENST00000308466 PDE4CQ08493 712 aa13.46□□□□□ -0.26
MUC4-201ENST00000308466 NGDNQ8NEJ9 315 aaKnown RBP13.46□□□□□ -0.26
MUC4-201ENST00000308466 NOB1Q9ULX3 412 aaKnown RBP13.46□□□□□ -0.26
MUC4-201ENST00000308466 RTF1Q92541 710 aaKnown RBP13.45□□□□□ -0.26
MUC4-201ENST00000308466 USP35Q9P2H5 1018 aa13.45□□□□□ -0.26
MUC4-201ENST00000308466 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
MUC4-201ENST00000308466 HSCBQ8IWL3 235 aa13.45□□□□□ -0.26
MUC4-201ENST00000308466 CDC42BPBQ9Y5S2 1711 aa13.45□□□□□ -0.26
MUC4-201ENST00000308466 ATP7AQ04656 1500 aa13.45□□□□□ -0.26
MUC4-201ENST00000308466 CROCC2H7BZ55 1655 aa13.45□□□□□ -0.26
MUC4-201ENST00000308466 GZF1Q9H116 711 aaPredicted RBP13.45□□□□□ -0.26
MUC4-201ENST00000308466 ZNF518AQ6AHZ1 1483 aa13.44□□□□□ -0.26
MUC4-201ENST00000308466 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
MUC4-201ENST00000308466 UGGT1Q9NYU2 1555 aa13.44□□□□□ -0.26
MUC4-201ENST00000308466 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
MUC4-201ENST00000308466 SLC4A10Q6U841 1118 aa13.44□□□□□ -0.26
MUC4-201ENST00000308466 PIK3C2GO75747 1445 aa13.43□□□□□ -0.26
MUC4-201ENST00000308466 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
MUC4-201ENST00000308466 SSH1Q8WYL5 1049 aa13.43□□□□□ -0.26
MUC4-201ENST00000308466 MVPQ14764 893 aaKnown RBP13.42□□□□□ -0.26
MUC4-201ENST00000308466 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
MUC4-201ENST00000308466 CLASP1Q7Z460 1538 aa13.42□□□□□ -0.26
MUC4-201ENST00000308466 FYB1O15117 783 aa13.42□□□□□ -0.26
MUC4-201ENST00000308466 C1orf115Q9H7X2 142 aa13.42□□□□□ -0.26
MUC4-201ENST00000308466 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
MUC4-201ENST00000308466 AMPHP49418 695 aa13.41□□□□□ -0.26
MUC4-201ENST00000308466 ATF7IPQ6VMQ6 1270 aa13.41□□□□□ -0.26
MUC4-201ENST00000308466 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
MUC4-201ENST00000308466 LMOD3Q0VAK6 560 aa13.41□□□□□ -0.26
MUC4-201ENST00000308466 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
MUC4-201ENST00000308466 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
MUC4-201ENST00000308466 ABCC1P33527 1531 aa13.4□□□□□ -0.26
MUC4-201ENST00000308466 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
MUC4-201ENST00000308466 RLBP1P12271 317 aa13.4□□□□□ -0.26
MUC4-201ENST00000308466 PCDHB15Q9Y5E8 787 aa13.4□□□□□ -0.26
MUC4-201ENST00000308466 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
MUC4-201ENST00000308466 GNAI1P63096 354 aa13.39□□□□□ -0.27
MUC4-201ENST00000308466 SLC26A8Q96RN1 970 aa13.39□□□□□ -0.27
MUC4-201ENST00000308466 POLR3AO14802 1390 aaPredicted RBP13.39□□□□□ -0.27
MUC4-201ENST00000308466 NME9Q86XW9 330 aa13.39□□□□□ -0.27
MUC4-201ENST00000308466 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
MUC4-201ENST00000308466 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
MUC4-201ENST00000308466 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
MUC4-201ENST00000308466 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
MUC4-201ENST00000308466 PRDM15P57071 1507 aaPredicted RBP13.38□□□□□ -0.27
MUC4-201ENST00000308466 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
MUC4-201ENST00000308466 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
MUC4-201ENST00000308466 NUTM2GQ5VZR2 741 aa13.38□□□□□ -0.27
MUC4-201ENST00000308466 ZMYM4Q5VZL5 1548 aa13.38□□□□□ -0.27
MUC4-201ENST00000308466 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
MUC4-201ENST00000308466 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
MUC4-201ENST00000308466 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
MUC4-201ENST00000308466 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
MUC4-201ENST00000308466 FCHSD2O94868 740 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms