RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 ZMYM3Q14202 1370 aa26.76■■□□□ 1.87
SSH3-202ENST00000308298 SAFB2Q14151 953 aaKnown RBP eCLIP26.76■■□□□ 1.87
SSH3-202ENST00000308298 NINLQ9Y2I6 1382 aa26.75■■□□□ 1.87
SSH3-202ENST00000308298 CDCA7LQ96GN5 454 aa26.74■■□□□ 1.87
SSH3-202ENST00000308298 CABP2Q9NPB3 220 aa26.74■■□□□ 1.87
SSH3-202ENST00000308298 CGNL1Q0VF96 1302 aa26.73■■□□□ 1.87
SSH3-202ENST00000308298 POLR3AO14802 1390 aaPredicted RBP26.73■■□□□ 1.87
SSH3-202ENST00000308298 MORC1Q86VD1 984 aa26.73■■□□□ 1.87
SSH3-202ENST00000308298 PRAM1Q96QH2 718 aa26.73■■□□□ 1.87
SSH3-202ENST00000308298 RCAN3Q9UKA8 241 aa26.73■■□□□ 1.87
SSH3-202ENST00000308298 DLC1Q96QB1 1528 aa26.72■■□□□ 1.87
SSH3-202ENST00000308298 POGKQ9P215 609 aa26.71■■□□□ 1.87
SSH3-202ENST00000308298 NSD2O96028 1365 aa26.7■■□□□ 1.86
SSH3-202ENST00000308298 ATAD2Q6PL18 1390 aa26.69■■□□□ 1.86
SSH3-202ENST00000308298 PLEKHH1Q9ULM0 1364 aa26.69■■□□□ 1.86
SSH3-202ENST00000308298 NRXN3Q9Y4C0 1643 aa26.69■■□□□ 1.86
SSH3-202ENST00000308298 B4GALNT3Q6L9W6 998 aa26.69■■□□□ 1.86
SSH3-202ENST00000308298 SHPRHQ149N8 1683 aa26.69■■□□□ 1.86
SSH3-202ENST00000308298 RRP1P56182 461 aaKnown RBP26.68■■□□□ 1.86
SSH3-202ENST00000308298 SRPK2P78362 688 aaKnown RBP26.68■■□□□ 1.86
SSH3-202ENST00000308298 MINK1Q8N4C8 1332 aaPredicted RBP26.68■■□□□ 1.86
SSH3-202ENST00000308298 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.66■■□□□ 1.86
SSH3-202ENST00000308298 TNRQ92752 1358 aa26.66■■□□□ 1.86
SSH3-202ENST00000308298 ZNF521Q96K83 1311 aa26.65■■□□□ 1.86
SSH3-202ENST00000308298 A0A1W2PP64 1363 aa26.65■■□□□ 1.86
SSH3-202ENST00000308298 UBR1Q8IWV7 1749 aa26.63■■□□□ 1.85
SSH3-202ENST00000308298 ABCC11Q96J66 1382 aa26.62■■□□□ 1.85
SSH3-202ENST00000308298 CCDC146Q8IYE0 955 aa26.62■■□□□ 1.85
SSH3-202ENST00000308298 ANKRD26Q9UPS8 1709 aa26.62■■□□□ 1.85
SSH3-202ENST00000308298 MYT1Q01538 1121 aa26.61■■□□□ 1.85
SSH3-202ENST00000308298 TNNT2P45379 298 aaPredicted RBP26.61■■□□□ 1.85
SSH3-202ENST00000308298 CD163L1Q9NR16 1453 aa26.59■■□□□ 1.85
SSH3-202ENST00000308298 KNDC1Q76NI1 1749 aa26.59■■□□□ 1.85
SSH3-202ENST00000308298 GOLGA2Q08379 1002 aa26.58■■□□□ 1.85
SSH3-202ENST00000308298 TERF2IPQ9NYB0 399 aa26.58■■□□□ 1.85
SSH3-202ENST00000308298 CDK19Q9BWU1 502 aa26.58■■□□□ 1.85
SSH3-202ENST00000308298 APAF1O14727 1248 aa26.57■■□□□ 1.84
SSH3-202ENST00000308298 HDGFP51858 240 aaKnown RBP26.57■■□□□ 1.84
SSH3-202ENST00000308298 NGEFQ8N5V2 710 aa26.57■■□□□ 1.84
SSH3-202ENST00000308298 DUSP27Q5VZP5 1158 aa26.55■■□□□ 1.84
SSH3-202ENST00000308298 CCDC136Q96JN2 1154 aa26.55■■□□□ 1.84
SSH3-202ENST00000308298 MTHFSP49914 203 aa26.55■■□□□ 1.84
SSH3-202ENST00000308298 CFAP53Q96M91 514 aa26.54■■□□□ 1.84
SSH3-202ENST00000308298 MED14O60244 1454 aa26.54■■□□□ 1.84
SSH3-202ENST00000308298 KIF20BQ96Q89 1820 aa26.54■■□□□ 1.84
SSH3-202ENST00000308298 TRHP20396 242 aaPredicted RBP26.53■■□□□ 1.84
SSH3-202ENST00000308298 METP08581 1390 aa26.53■■□□□ 1.84
SSH3-202ENST00000308298 TMEM2Q9UHN6 1383 aa26.53■■□□□ 1.84
SSH3-202ENST00000308298 WAPLQ7Z5K2 1190 aa26.53■■□□□ 1.84
SSH3-202ENST00000308298 SLFN5Q08AF3 891 aa26.51■■□□□ 1.83
SSH3-202ENST00000308298 HDGFL2Q7Z4V5 671 aaPredicted RBP26.51■■□□□ 1.83
SSH3-202ENST00000308298 NLRP1Q9C000 1473 aa26.51■■□□□ 1.83
SSH3-202ENST00000308298 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
SSH3-202ENST00000308298 TECPR2O15040 1411 aa26.49■■□□□ 1.83
SSH3-202ENST00000308298 CPS1P31327 1500 aa26.49■■□□□ 1.83
SSH3-202ENST00000308298 C3P01024 1663 aa26.49■■□□□ 1.83
SSH3-202ENST00000308298 ATP7BP35670 1465 aa26.49■■□□□ 1.83
SSH3-202ENST00000308298 RBM19Q9Y4C8 960 aaKnown RBP26.49■■□□□ 1.83
SSH3-202ENST00000308298 TRMT2AQ8IZ69 625 aaKnown RBP26.48■■□□□ 1.83
SSH3-202ENST00000308298 FAM135BQ49AJ0 1406 aa26.48■■□□□ 1.83
SSH3-202ENST00000308298 EXOC6Q8TAG9 804 aa26.48■■□□□ 1.83
SSH3-202ENST00000308298 IQSEC2Q5JU85 1478 aa26.47■■□□□ 1.83
SSH3-202ENST00000308298 FER1L4A9Z1Z3 1794 aa26.47■■□□□ 1.83
SSH3-202ENST00000308298 CABP1Q9NZU7 370 aa26.47■■□□□ 1.83
SSH3-202ENST00000308298 GGNBP2Q9H3C7 697 aa26.46■■□□□ 1.83
SSH3-202ENST00000308298 FYB1O15117 783 aa26.46■■□□□ 1.83
SSH3-202ENST00000308298 RUNDC1Q96C34 613 aa26.46■■□□□ 1.83
SSH3-202ENST00000308298 SIRT1Q96EB6 747 aa26.45■■□□□ 1.82
SSH3-202ENST00000308298 NKTRP30414 1462 aaKnown RBP26.43■■□□□ 1.82
SSH3-202ENST00000308298 E9PSI1 815 aa26.43■■□□□ 1.82
SSH3-202ENST00000308298 PLIN1O60240 522 aa26.42■■□□□ 1.82
SSH3-202ENST00000308298 WASLO00401 505 aaPredicted RBP26.41■■□□□ 1.82
SSH3-202ENST00000308298 TXNDC2Q86VQ3 553 aa26.41■■□□□ 1.82
SSH3-202ENST00000308298 ADAMTS13Q76LX8 1427 aa26.41■■□□□ 1.82
SSH3-202ENST00000308298 SPINK5Q9NQ38 1064 aaPredicted RBP26.41■■□□□ 1.82
SSH3-202ENST00000308298 COL3A1P02461 1466 aaPredicted RBP26.4■■□□□ 1.82
SSH3-202ENST00000308298 PLEKHG1Q9ULL1 1385 aa26.4■■□□□ 1.82
SSH3-202ENST00000308298 CEBPAP49715 358 aaPredicted RBP26.39■■□□□ 1.81
SSH3-202ENST00000308298 WWC1Q8IX03 1113 aa26.39■■□□□ 1.81
SSH3-202ENST00000308298 TCP11L2Q8N4U5 519 aa26.38■■□□□ 1.81
SSH3-202ENST00000308298 ADGRB2O60241 1585 aa26.37■■□□□ 1.81
SSH3-202ENST00000308298 PPIP5K1Q6PFW1 1433 aa26.37■■□□□ 1.81
SSH3-202ENST00000308298 DMRT2Q9Y5R5 561 aa26.36■■□□□ 1.81
SSH3-202ENST00000308298 CPSF1Q10570 1443 aaKnown RBP26.36■■□□□ 1.81
SSH3-202ENST00000308298 SLIT1O75093 1534 aa26.35■■□□□ 1.81
SSH3-202ENST00000308298 CDC42BPGQ6DT37 1551 aa26.35■■□□□ 1.81
SSH3-202ENST00000308298 U2AF1L5P0DN76 240 aaPredicted RBP26.35■■□□□ 1.81
SSH3-202ENST00000308298 U2AF1Q01081 240 aaKnown RBP eCLIP26.35■■□□□ 1.81
SSH3-202ENST00000308298 MON2Q7Z3U7 1717 aa26.35■■□□□ 1.81
SSH3-202ENST00000308298 LTKP29376 864 aa26.34■■□□□ 1.81
SSH3-202ENST00000308298 PHF23Q9BUL5 403 aaPredicted RBP26.34■■□□□ 1.81
SSH3-202ENST00000308298 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.34■■□□□ 1.81
SSH3-202ENST00000308298 CRBNQ96SW2 442 aa26.34■■□□□ 1.81
SSH3-202ENST00000308298 EDC4Q6P2E9 1401 aaKnown RBP26.34■■□□□ 1.81
SSH3-202ENST00000308298 ITSN1Q15811 1721 aa26.34■■□□□ 1.81
SSH3-202ENST00000308298 AKAP12Q02952 1782 aa26.33■■□□□ 1.81
SSH3-202ENST00000308298 NCBP3Q53F19 620 aaKnown RBP26.33■■□□□ 1.81
SSH3-202ENST00000308298 ARHGAP23Q9P227 1491 aa26.33■■□□□ 1.81
SSH3-202ENST00000308298 ROBO2Q9HCK4 1378 aa26.32■■□□□ 1.8
SSH3-202ENST00000308298 CCDC27Q2M243 656 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms