RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 USP32Q8NFA0 1604 aa21.96■■□□□ 1.11
TVP23B-201ENST00000307767 CABP2Q9NPB3 220 aa21.95■■□□□ 1.11
TVP23B-201ENST00000307767 RBM19Q9Y4C8 960 aaKnown RBP21.95■■□□□ 1.1
TVP23B-201ENST00000307767 POLR3AO14802 1390 aaPredicted RBP21.95■■□□□ 1.1
TVP23B-201ENST00000307767 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
TVP23B-201ENST00000307767 ANKRD36BQ8N2N9 1353 aa21.94■■□□□ 1.1
TVP23B-201ENST00000307767 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
TVP23B-201ENST00000307767 DUSP27Q5VZP5 1158 aa21.91■■□□□ 1.1
TVP23B-201ENST00000307767 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
TVP23B-201ENST00000307767 MORC1Q86VD1 984 aa21.89■■□□□ 1.1
TVP23B-201ENST00000307767 RIMS2Q9UQ26 1411 aa21.89■■□□□ 1.1
TVP23B-201ENST00000307767 ZMYM3Q14202 1370 aa21.89■■□□□ 1.09
TVP23B-201ENST00000307767 TRMT2AQ8IZ69 625 aaKnown RBP21.87■■□□□ 1.09
TVP23B-201ENST00000307767 STAG3Q9UJ98 1225 aa21.87■■□□□ 1.09
TVP23B-201ENST00000307767 SETD1AO15047 1707 aaKnown RBP21.87■■□□□ 1.09
TVP23B-201ENST00000307767 CD163L1Q9NR16 1453 aa21.87■■□□□ 1.09
TVP23B-201ENST00000307767 CGNL1Q0VF96 1302 aa21.87■■□□□ 1.09
TVP23B-201ENST00000307767 SHPRHQ149N8 1683 aa21.87■■□□□ 1.09
TVP23B-201ENST00000307767 APAF1O14727 1248 aa21.87■■□□□ 1.09
TVP23B-201ENST00000307767 MINK1Q8N4C8 1332 aaPredicted RBP21.87■■□□□ 1.09
TVP23B-201ENST00000307767 EXOC6Q8TAG9 804 aa21.86■■□□□ 1.09
TVP23B-201ENST00000307767 A0A1W2PP64 1363 aa21.86■■□□□ 1.09
TVP23B-201ENST00000307767 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
TVP23B-201ENST00000307767 TNNT2P45379 298 aaPredicted RBP21.84■■□□□ 1.09
TVP23B-201ENST00000307767 SLFN5Q08AF3 891 aa21.84■■□□□ 1.09
TVP23B-201ENST00000307767 NINLQ9Y2I6 1382 aa21.84■■□□□ 1.09
TVP23B-201ENST00000307767 NRXN3Q9Y4C0 1643 aa21.83■■□□□ 1.09
TVP23B-201ENST00000307767 ABCC11Q96J66 1382 aa21.83■■□□□ 1.09
TVP23B-201ENST00000307767 GOLGA2Q08379 1002 aa21.83■■□□□ 1.09
TVP23B-201ENST00000307767 NSD2O96028 1365 aa21.83■■□□□ 1.08
TVP23B-201ENST00000307767 CCDC136Q96JN2 1154 aa21.83■■□□□ 1.08
TVP23B-201ENST00000307767 DLC1Q96QB1 1528 aa21.82■■□□□ 1.08
TVP23B-201ENST00000307767 PLIN1O60240 522 aa21.82■■□□□ 1.08
TVP23B-201ENST00000307767 SRPK2P78362 688 aaKnown RBP21.82■■□□□ 1.08
TVP23B-201ENST00000307767 POGKQ9P215 609 aa21.82■■□□□ 1.08
TVP23B-201ENST00000307767 DMRT2Q9Y5R5 561 aa21.82■■□□□ 1.08
TVP23B-201ENST00000307767 MTHFSP49914 203 aa21.81■■□□□ 1.08
TVP23B-201ENST00000307767 ATAD2Q6PL18 1390 aa21.81■■□□□ 1.08
TVP23B-201ENST00000307767 NLRP1Q9C000 1473 aa21.81■■□□□ 1.08
TVP23B-201ENST00000307767 CDK19Q9BWU1 502 aa21.79■■□□□ 1.08
TVP23B-201ENST00000307767 WAPLQ7Z5K2 1190 aa21.79■■□□□ 1.08
TVP23B-201ENST00000307767 METP08581 1390 aa21.78■■□□□ 1.08
TVP23B-201ENST00000307767 FYB1O15117 783 aa21.76■■□□□ 1.07
TVP23B-201ENST00000307767 IQSEC2Q5JU85 1478 aa21.76■■□□□ 1.07
TVP23B-201ENST00000307767 TNRQ92752 1358 aa21.75■■□□□ 1.07
TVP23B-201ENST00000307767 C20orf194Q5TEA3 1177 aa21.75■■□□□ 1.07
TVP23B-201ENST00000307767 NGEFQ8N5V2 710 aa21.75■■□□□ 1.07
TVP23B-201ENST00000307767 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
TVP23B-201ENST00000307767 MED14O60244 1454 aa21.73■■□□□ 1.07
TVP23B-201ENST00000307767 GGNBP2Q9H3C7 697 aa21.73■■□□□ 1.07
TVP23B-201ENST00000307767 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
TVP23B-201ENST00000307767 WWC1Q8IX03 1113 aa21.73■■□□□ 1.07
TVP23B-201ENST00000307767 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.73■■□□□ 1.07
TVP23B-201ENST00000307767 CRBNQ96SW2 442 aa21.72■■□□□ 1.07
TVP23B-201ENST00000307767 ESF1Q9H501 851 aaKnown RBP21.72■■□□□ 1.07
TVP23B-201ENST00000307767 TERF2IPQ9NYB0 399 aa21.72■■□□□ 1.07
TVP23B-201ENST00000307767 RUNDC1Q96C34 613 aa21.71■■□□□ 1.07
TVP23B-201ENST00000307767 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
TVP23B-201ENST00000307767 TMEM2Q9UHN6 1383 aa21.7■■□□□ 1.06
TVP23B-201ENST00000307767 E9PSI1 815 aa21.7■■□□□ 1.06
TVP23B-201ENST00000307767 NKTRP30414 1462 aaKnown RBP21.69■■□□□ 1.06
TVP23B-201ENST00000307767 TECPR2O15040 1411 aa21.69■■□□□ 1.06
TVP23B-201ENST00000307767 TCP11L2Q8N4U5 519 aa21.68■■□□□ 1.06
TVP23B-201ENST00000307767 UBR1Q8IWV7 1749 aa21.68■■□□□ 1.06
TVP23B-201ENST00000307767 CFAP53Q96M91 514 aa21.67■■□□□ 1.06
TVP23B-201ENST00000307767 RRP7AQ9Y3A4 280 aaKnown RBP21.67■■□□□ 1.06
TVP23B-201ENST00000307767 ANKRD26Q9UPS8 1709 aa21.66■■□□□ 1.06
TVP23B-201ENST00000307767 TXNDC2Q86VQ3 553 aa21.66■■□□□ 1.06
TVP23B-201ENST00000307767 SIRT1Q96EB6 747 aa21.66■■□□□ 1.06
TVP23B-201ENST00000307767 ADAMTS13Q76LX8 1427 aa21.66■■□□□ 1.06
TVP23B-201ENST00000307767 HDGFL2Q7Z4V5 671 aaPredicted RBP21.65■■□□□ 1.06
TVP23B-201ENST00000307767 FAM135BQ49AJ0 1406 aa21.64■■□□□ 1.06
TVP23B-201ENST00000307767 ATP7BP35670 1465 aa21.64■■□□□ 1.06
TVP23B-201ENST00000307767 WASLO00401 505 aaPredicted RBP21.64■■□□□ 1.05
TVP23B-201ENST00000307767 CEBPAP49715 358 aaPredicted RBP21.64■■□□□ 1.05
TVP23B-201ENST00000307767 FANCIQ9NVI1 1328 aa21.63■■□□□ 1.05
TVP23B-201ENST00000307767 PNPLA6Q8IY17 1366 aa21.63■■□□□ 1.05
TVP23B-201ENST00000307767 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
TVP23B-201ENST00000307767 LTKP29376 864 aa21.63■■□□□ 1.05
TVP23B-201ENST00000307767 KNDC1Q76NI1 1749 aa21.63■■□□□ 1.05
TVP23B-201ENST00000307767 ADGRB2O60241 1585 aa21.62■■□□□ 1.05
TVP23B-201ENST00000307767 CCDC27Q2M243 656 aa21.62■■□□□ 1.05
TVP23B-201ENST00000307767 NCBP3Q53F19 620 aaKnown RBP21.62■■□□□ 1.05
TVP23B-201ENST00000307767 CPS1P31327 1500 aa21.62■■□□□ 1.05
TVP23B-201ENST00000307767 BCAR3O75815 825 aa21.62■■□□□ 1.05
TVP23B-201ENST00000307767 PLEKHF1Q96S99 279 aa21.62■■□□□ 1.05
TVP23B-201ENST00000307767 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
TVP23B-201ENST00000307767 MSH5O43196 834 aa21.61■■□□□ 1.05
TVP23B-201ENST00000307767 NEUROD2Q15784 382 aa21.61■■□□□ 1.05
TVP23B-201ENST00000307767 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
TVP23B-201ENST00000307767 HDGFP51858 240 aaKnown RBP21.6■■□□□ 1.05
TVP23B-201ENST00000307767 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
TVP23B-201ENST00000307767 ROBO2Q9HCK4 1378 aa21.59■■□□□ 1.05
TVP23B-201ENST00000307767 NCKAP5LQ9HCH0 1330 aa21.59■■□□□ 1.05
TVP23B-201ENST00000307767 WDR63Q8IWG1 891 aa21.59■■□□□ 1.05
TVP23B-201ENST00000307767 KIF20BQ96Q89 1820 aa21.58■■□□□ 1.04
TVP23B-201ENST00000307767 FBLN1P23142 703 aa21.57■■□□□ 1.04
TVP23B-201ENST00000307767 PLEKHG1Q9ULL1 1385 aa21.57■■□□□ 1.04
TVP23B-201ENST00000307767 PPIP5K1Q6PFW1 1433 aa21.57■■□□□ 1.04
TVP23B-201ENST00000307767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.57■■□□□ 1.043e-6■■■■□ 22.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms