RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RNF214Q8ND24 703 aa16.62■□□□□ 0.25
SEC23A-201ENST00000307712 NUCB2P80303 420 aa16.61■□□□□ 0.25
SEC23A-201ENST00000307712 CTTNBP2Q8WZ74 1663 aa16.61■□□□□ 0.25
SEC23A-201ENST00000307712 RRP9O43818 475 aaKnown RBP16.6■□□□□ 0.25
SEC23A-201ENST00000307712 HAP1P54257 671 aaPredicted RBP16.6■□□□□ 0.25
SEC23A-201ENST00000307712 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
SEC23A-201ENST00000307712 ISY1Q9ULR0 285 aaKnown RBP16.6■□□□□ 0.25
SEC23A-201ENST00000307712 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
SEC23A-201ENST00000307712 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
SEC23A-201ENST00000307712 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
SEC23A-201ENST00000307712 TMEM57Q8N5G2 664 aa16.6■□□□□ 0.25
SEC23A-201ENST00000307712 HMOX1P09601 288 aa16.6■□□□□ 0.25
SEC23A-201ENST00000307712 CDC45O75419 566 aa16.59■□□□□ 0.25
SEC23A-201ENST00000307712 KCNJ4P48050 445 aa16.59■□□□□ 0.25
SEC23A-201ENST00000307712 TPM2P07951 284 aa16.59■□□□□ 0.25
SEC23A-201ENST00000307712 RLBP1P12271 317 aa16.59■□□□□ 0.25
SEC23A-201ENST00000307712 CCDC173Q0VFZ6 552 aa16.58■□□□□ 0.25
SEC23A-201ENST00000307712 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.25
SEC23A-201ENST00000307712 SSH1Q8WYL5 1049 aa16.58■□□□□ 0.25
SEC23A-201ENST00000307712 K7ELQ4 463 aaPredicted RBP16.58■□□□□ 0.24
SEC23A-201ENST00000307712 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.24
SEC23A-201ENST00000307712 TNPO1Q92973 898 aaKnown RBP16.58■□□□□ 0.24
SEC23A-201ENST00000307712 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.24
SEC23A-201ENST00000307712 HMMRO75330 724 aa16.58■□□□□ 0.24
SEC23A-201ENST00000307712 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.24
SEC23A-201ENST00000307712 NUP153P49790 1475 aaKnown RBP16.58■□□□□ 0.24
SEC23A-201ENST00000307712 DRC7Q8IY82 874 aa16.57■□□□□ 0.24
SEC23A-201ENST00000307712 DMRT2Q9Y5R5 561 aa16.57■□□□□ 0.24
SEC23A-201ENST00000307712 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
SEC23A-201ENST00000307712 CIZ1Q9ULV3 898 aaPredicted RBP16.56■□□□□ 0.24
SEC23A-201ENST00000307712 UHRF1BP1Q6BDS2 1440 aa16.56■□□□□ 0.24
SEC23A-201ENST00000307712 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
SEC23A-201ENST00000307712 CLCN1P35523 988 aa16.56■□□□□ 0.24
SEC23A-201ENST00000307712 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
SEC23A-201ENST00000307712 REC8O95072 547 aa16.55■□□□□ 0.24
SEC23A-201ENST00000307712 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
SEC23A-201ENST00000307712 CCDC141Q6ZP82 1450 aa16.55■□□□□ 0.24
SEC23A-201ENST00000307712 API5Q9BZZ5 524 aaKnown RBP16.55■□□□□ 0.24
SEC23A-201ENST00000307712 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
SEC23A-201ENST00000307712 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
SEC23A-201ENST00000307712 TRIM27P14373 513 aa16.54■□□□□ 0.24
SEC23A-201ENST00000307712 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
SEC23A-201ENST00000307712 KDM5BQ9UGL1 1544 aa16.54■□□□□ 0.24
SEC23A-201ENST00000307712 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
SEC23A-201ENST00000307712 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
SEC23A-201ENST00000307712 MPNDQ8N594 471 aa16.53■□□□□ 0.24
SEC23A-201ENST00000307712 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
SEC23A-201ENST00000307712 LMOD3Q0VAK6 560 aa16.53■□□□□ 0.24
SEC23A-201ENST00000307712 SSFA2P28290 1259 aa16.53■□□□□ 0.24
SEC23A-201ENST00000307712 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
SEC23A-201ENST00000307712 TMPOP42166 694 aaKnown RBP16.52■□□□□ 0.24
SEC23A-201ENST00000307712 PHF14O94880 888 aa16.51■□□□□ 0.23
SEC23A-201ENST00000307712 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
SEC23A-201ENST00000307712 ZSCAN30Q86W11 494 aa16.51■□□□□ 0.23
SEC23A-201ENST00000307712 GCC1Q96CN9 775 aa16.51■□□□□ 0.23
SEC23A-201ENST00000307712 RABEP1Q15276 862 aa16.51■□□□□ 0.23
SEC23A-201ENST00000307712 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
SEC23A-201ENST00000307712 GCC2Q8IWJ2 1684 aa16.5■□□□□ 0.23
SEC23A-201ENST00000307712 GNAI1P63096 354 aa16.5■□□□□ 0.23
SEC23A-201ENST00000307712 ANO2Q9NQ90 1003 aa16.5■□□□□ 0.23
SEC23A-201ENST00000307712 ZMYND15Q9H091 742 aa16.5■□□□□ 0.23
SEC23A-201ENST00000307712 WDR62O43379 1518 aa16.5■□□□□ 0.23
SEC23A-201ENST00000307712 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
SEC23A-201ENST00000307712 DNMT1P26358 1616 aaKnown RBP16.49■□□□□ 0.23
SEC23A-201ENST00000307712 STK31Q9BXU1 1019 aa16.49■□□□□ 0.23
SEC23A-201ENST00000307712 ADGRF5Q8IZF2 1346 aa16.49■□□□□ 0.23
SEC23A-201ENST00000307712 ARHGEF12Q9NZN5 1544 aa16.49■□□□□ 0.23
SEC23A-201ENST00000307712 NEK4P51957 841 aa16.48■□□□□ 0.23
SEC23A-201ENST00000307712 ZMYM4Q5VZL5 1548 aa16.48■□□□□ 0.23
SEC23A-201ENST00000307712 ZRSR1Q15695 479 aaKnown RBP16.48■□□□□ 0.23
SEC23A-201ENST00000307712 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
SEC23A-201ENST00000307712 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
SEC23A-201ENST00000307712 KIF14Q15058 1648 aa16.47■□□□□ 0.23
SEC23A-201ENST00000307712 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
SEC23A-201ENST00000307712 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
SEC23A-201ENST00000307712 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
SEC23A-201ENST00000307712 FGD1P98174 961 aa16.47■□□□□ 0.23
SEC23A-201ENST00000307712 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
SEC23A-201ENST00000307712 SAMD9Q5K651 1589 aa16.46■□□□□ 0.23
SEC23A-201ENST00000307712 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
SEC23A-201ENST00000307712 SCAF11Q99590 1463 aaKnown RBP16.46■□□□□ 0.23
SEC23A-201ENST00000307712 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.23
SEC23A-201ENST00000307712 NUTM2FA1L443 756 aa16.46■□□□□ 0.22
SEC23A-201ENST00000307712 MLECQ14165 292 aa16.46■□□□□ 0.22
SEC23A-201ENST00000307712 TWISTNBQ3B726 338 aaPredicted RBP16.46■□□□□ 0.22
SEC23A-201ENST00000307712 CCDC39Q9UFE4 941 aa16.45■□□□□ 0.22
SEC23A-201ENST00000307712 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
SEC23A-201ENST00000307712 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
SEC23A-201ENST00000307712 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
SEC23A-201ENST00000307712 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
SEC23A-201ENST00000307712 MAP7D2Q96T17 732 aa16.44■□□□□ 0.22
SEC23A-201ENST00000307712 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
SEC23A-201ENST00000307712 CHMP3Q9Y3E7 222 aa16.44■□□□□ 0.22
SEC23A-201ENST00000307712 UQCRHLA0A096LP55 91 aa16.44■□□□□ 0.22
SEC23A-201ENST00000307712 UQCRHP07919 91 aa16.44■□□□□ 0.22
SEC23A-201ENST00000307712 XPCQ01831 940 aaPredicted RBP16.44■□□□□ 0.22
SEC23A-201ENST00000307712 TBC1D9Q6ZT07 1266 aa16.43■□□□□ 0.22
SEC23A-201ENST00000307712 FAM135AQ9P2D6 1515 aa16.43■□□□□ 0.22
SEC23A-201ENST00000307712 NECTIN2Q92692 538 aa16.42■□□□□ 0.22
SEC23A-201ENST00000307712 KDM5CP41229 1560 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms