RNA–Protein interactions for RNA: ENST00000305921.7

PPM1D-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1D, Length 4,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-201ENST00000305921 RAPGEF3O95398 923 aa20.18■□□□□ 0.82
PPM1D-201ENST00000305921 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
PPM1D-201ENST00000305921 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
PPM1D-201ENST00000305921 INTS3Q68E01 1043 aaKnown RBP20.18■□□□□ 0.82
PPM1D-201ENST00000305921 IQGAP2Q13576 1575 aa20.17■□□□□ 0.82
PPM1D-201ENST00000305921 GPRASP1Q5JY77 1395 aa20.17■□□□□ 0.82
PPM1D-201ENST00000305921 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
PPM1D-201ENST00000305921 CPLX2Q6PUV4 134 aaKnown RBP20.17■□□□□ 0.82
PPM1D-201ENST00000305921 ABTB2Q8N961 1025 aa20.17■□□□□ 0.82
PPM1D-201ENST00000305921 ERBINQ96RT1 1412 aa20.16■□□□□ 0.82
PPM1D-201ENST00000305921 SYTL4Q96C24 671 aaPredicted RBP20.15■□□□□ 0.82
PPM1D-201ENST00000305921 EXOSC9Q06265 439 aaKnown RBP20.15■□□□□ 0.82
PPM1D-201ENST00000305921 CHMP5Q9NZZ3 219 aa20.15■□□□□ 0.82
PPM1D-201ENST00000305921 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
PPM1D-201ENST00000305921 THEMISQ8N1K5 641 aaPredicted RBP20.15■□□□□ 0.82
PPM1D-201ENST00000305921 ZNF692Q9BU19 519 aaPredicted RBP20.15■□□□□ 0.82
PPM1D-201ENST00000305921 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
PPM1D-201ENST00000305921 CABP1Q9NZU7 370 aa20.15■□□□□ 0.82
PPM1D-201ENST00000305921 PDE3AQ14432 1141 aa20.14■□□□□ 0.82
PPM1D-201ENST00000305921 RNF20Q5VTR2 975 aa20.14■□□□□ 0.82
PPM1D-201ENST00000305921 UBTFL1P0CB47 393 aaPredicted RBP20.14■□□□□ 0.81
PPM1D-201ENST00000305921 ERC2O15083 957 aa20.13■□□□□ 0.81
PPM1D-201ENST00000305921 GSE1Q14687 1217 aa20.13■□□□□ 0.81
PPM1D-201ENST00000305921 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
PPM1D-201ENST00000305921 C22orf23Q9BZE7 217 aa20.13■□□□□ 0.81
PPM1D-201ENST00000305921 FOXD4L6Q3SYB3 417 aaPredicted RBP20.13■□□□□ 0.81
PPM1D-201ENST00000305921 FOXD4L3Q6VB84 417 aaPredicted RBP20.13■□□□□ 0.81
PPM1D-201ENST00000305921 SYNE3Q6ZMZ3 975 aa20.12■□□□□ 0.81
PPM1D-201ENST00000305921 MAGI1Q96QZ7 1491 aaPredicted RBP20.12■□□□□ 0.81
PPM1D-201ENST00000305921 GNAI3P08754 354 aa20.12■□□□□ 0.81
PPM1D-201ENST00000305921 CCDC141Q6ZP82 1450 aa20.12■□□□□ 0.81
PPM1D-201ENST00000305921 AKAP17AQ02040 695 aaKnown RBP20.11■□□□□ 0.81
PPM1D-201ENST00000305921 PCF11O94913 1555 aaKnown RBP20.11■□□□□ 0.81
PPM1D-201ENST00000305921 WDR97A6NE52 1622 aa20.11■□□□□ 0.81
PPM1D-201ENST00000305921 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
PPM1D-201ENST00000305921 TWISTNBQ3B726 338 aaPredicted RBP20.11■□□□□ 0.81
PPM1D-201ENST00000305921 ESCO1Q5FWF5 840 aa20.1■□□□□ 0.81
PPM1D-201ENST00000305921 ARHGEF11O15085 1522 aa20.1■□□□□ 0.81
PPM1D-201ENST00000305921 AIMP1Q12904 312 aaKnown RBP20.1■□□□□ 0.81
PPM1D-201ENST00000305921 MAP3K1Q13233 1512 aa20.09■□□□□ 0.81
PPM1D-201ENST00000305921 CDC45O75419 566 aa20.09■□□□□ 0.81
PPM1D-201ENST00000305921 ATAD2Q6PL18 1390 aa20.09■□□□□ 0.81
PPM1D-201ENST00000305921 CUL7Q14999 1698 aa20.08■□□□□ 0.81
PPM1D-201ENST00000305921 PLEKHO1Q53GL0 409 aaPredicted RBP20.08■□□□□ 0.8
PPM1D-201ENST00000305921 MCTP1Q6DN14 999 aa20.08■□□□□ 0.8
PPM1D-201ENST00000305921 PROSER2Q86WR7 435 aaPredicted RBP20.08■□□□□ 0.8
PPM1D-201ENST00000305921 APPP05067 770 aa20.07■□□□□ 0.8
PPM1D-201ENST00000305921 WDR63Q8IWG1 891 aa20.07■□□□□ 0.8
PPM1D-201ENST00000305921 SULT6B1Q6IMI4 303 aa20.07■□□□□ 0.8
PPM1D-201ENST00000305921 PLB1Q6P1J6 1458 aa20.07■□□□□ 0.8
PPM1D-201ENST00000305921 CPLX1O14810 134 aa20.07■□□□□ 0.8
PPM1D-201ENST00000305921 CT47B1P0C2W7 299 aaPredicted RBP20.07■□□□□ 0.8
PPM1D-201ENST00000305921 TRDNQ13061 729 aa20.07■□□□□ 0.8
PPM1D-201ENST00000305921 TSR2Q969E8 191 aaKnown RBP20.07■□□□□ 0.8
PPM1D-201ENST00000305921 RTEL1-TNFRSF6BF6WH68 1400 aa20.07■□□□□ 0.8
PPM1D-201ENST00000305921 MARCH6O60337 910 aa20.06■□□□□ 0.8
PPM1D-201ENST00000305921 NUCB2P80303 420 aa20.06■□□□□ 0.8
PPM1D-201ENST00000305921 ABCC5O15440 1437 aa20.05■□□□□ 0.8
PPM1D-201ENST00000305921 CCDC184Q52MB2 194 aa20.05■□□□□ 0.8
PPM1D-201ENST00000305921 CLASRPQ8N2M8 674 aaKnown RBP20.05■□□□□ 0.8
PPM1D-201ENST00000305921 BECN2A8MW95 431 aa20.04■□□□□ 0.8
PPM1D-201ENST00000305921 BCAR3O75815 825 aa20.04■□□□□ 0.8
PPM1D-201ENST00000305921 CAMSAP2Q08AD1 1489 aa20.04■□□□□ 0.8
PPM1D-201ENST00000305921 GOLGA6L19H0YKK7 550 aa20.04■□□□□ 0.8
PPM1D-201ENST00000305921 NOL10Q9BSC4 688 aaKnown RBP20.04■□□□□ 0.8
PPM1D-201ENST00000305921 VPS37DQ86XT2 251 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 CREBRFQ8IUR6 639 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 SURF6O75683 361 aaKnown RBP20.03■□□□□ 0.8
PPM1D-201ENST00000305921 TRIM29Q14134 588 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 AMOTL1Q8IY63 956 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 SLC26A8Q96RN1 970 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 AKNAQ7Z591 1439 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 PDZRN3Q9UPQ7 1066 aa20.03■□□□□ 0.8
PPM1D-201ENST00000305921 NEUROD6Q96NK8 337 aa20.02■□□□□ 0.8
PPM1D-201ENST00000305921 SMC3Q9UQE7 1217 aa20.02■□□□□ 0.8
PPM1D-201ENST00000305921 GCC1Q96CN9 775 aa20.01■□□□□ 0.79
PPM1D-201ENST00000305921 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
PPM1D-201ENST00000305921 MSH5O43196 834 aa20.01■□□□□ 0.79
PPM1D-201ENST00000305921 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
PPM1D-201ENST00000305921 NINLQ9Y2I6 1382 aa20■□□□□ 0.79
PPM1D-201ENST00000305921 PTPN23Q9H3S7 1636 aa20■□□□□ 0.79
PPM1D-201ENST00000305921 VPS37CA5D8V6 355 aaPredicted RBP20■□□□□ 0.79
PPM1D-201ENST00000305921 HDGFL1Q5TGJ6 251 aa20■□□□□ 0.79
PPM1D-201ENST00000305921 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
PPM1D-201ENST00000305921 SLC4A2P04920 1241 aa19.99■□□□□ 0.79
PPM1D-201ENST00000305921 CCDC61Q9Y6R9 512 aa19.99■□□□□ 0.79
PPM1D-201ENST00000305921 ATF7IPQ6VMQ6 1270 aa19.99■□□□□ 0.79
PPM1D-201ENST00000305921 NCOA1Q15788 1441 aa19.98■□□□□ 0.79
PPM1D-201ENST00000305921 GNAI2P04899 355 aa19.98■□□□□ 0.79
PPM1D-201ENST00000305921 CNTROBQ8N137 903 aa19.98■□□□□ 0.79
PPM1D-201ENST00000305921 FCHSD2O94868 740 aa19.98■□□□□ 0.79
PPM1D-201ENST00000305921 VPS53Q5VIR6 699 aa19.97■□□□□ 0.79
PPM1D-201ENST00000305921 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
PPM1D-201ENST00000305921 TATP17735 454 aaPredicted RBP19.97■□□□□ 0.79
PPM1D-201ENST00000305921 TPD52L1Q16890 204 aaPredicted RBP19.97■□□□□ 0.79
PPM1D-201ENST00000305921 CD109Q6YHK3 1445 aa19.97■□□□□ 0.79
PPM1D-201ENST00000305921 BICD2Q8TD16 824 aa19.96■□□□□ 0.79
PPM1D-201ENST00000305921 NSD3Q9BZ95 1437 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms