RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 TULP4Q9NRJ4 1543 aa15.16■□□□□ 0.02
SCG2-201ENST00000305409 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
SCG2-201ENST00000305409 NPC1L1Q9UHC9 1359 aa15.14■□□□□ 0.01
SCG2-201ENST00000305409 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
SCG2-201ENST00000305409 BLMP54132 1417 aaPredicted RBP15.14■□□□□ 0.01
SCG2-201ENST00000305409 PLEKHH1Q9ULM0 1364 aa15.14■□□□□ 0.01
SCG2-201ENST00000305409 TXNDC2Q86VQ3 553 aa15.13■□□□□ 0.01
SCG2-201ENST00000305409 CDK19Q9BWU1 502 aa15.13■□□□□ 0.01
SCG2-201ENST00000305409 ARHGEF28Q8N1W1 1705 aaKnown RBP15.13■□□□□ 0.01
SCG2-201ENST00000305409 APAF1O14727 1248 aa15.13■□□□□ 0.01
SCG2-201ENST00000305409 ALKQ9UM73 1620 aa15.12■□□□□ 0.01
SCG2-201ENST00000305409 GGNBP2Q9H3C7 697 aa15.12■□□□□ 0.01
SCG2-201ENST00000305409 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
SCG2-201ENST00000305409 PTPRMP28827 1452 aa15.12■□□□□ 0.01
SCG2-201ENST00000305409 SPATA31D1Q6ZQQ2 1576 aa15.12■□□□□ 0.01
SCG2-201ENST00000305409 CGNL1Q0VF96 1302 aa15.11■□□□□ 0.01
SCG2-201ENST00000305409 MTHFSP49914 203 aa15.11■□□□□ 0.01
SCG2-201ENST00000305409 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
SCG2-201ENST00000305409 PLIN1O60240 522 aa15.11■□□□□ 0.01
SCG2-201ENST00000305409 TNRQ92752 1358 aa15.11■□□□□ 0.01
SCG2-201ENST00000305409 A0A1W2PP64 1363 aa15.1■□□□□ 0.01
SCG2-201ENST00000305409 METP08581 1390 aa15.1■□□□□ 0.01
SCG2-201ENST00000305409 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
SCG2-201ENST00000305409 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
SCG2-201ENST00000305409 NCKAP5LQ9HCH0 1330 aa15.08■□□□□ 0.01
SCG2-201ENST00000305409 ANKRD36BQ8N2N9 1353 aa15.08■□□□□ 0.01
SCG2-201ENST00000305409 PDE3BQ13370 1112 aa15.08■□□□□ 0
SCG2-201ENST00000305409 FBLN1P23142 703 aa15.08■□□□□ 0
SCG2-201ENST00000305409 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
SCG2-201ENST00000305409 RRP1P56182 461 aaKnown RBP15.07■□□□□ 0
SCG2-201ENST00000305409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.07■□□□□ 0
SCG2-201ENST00000305409 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
SCG2-201ENST00000305409 LTKP29376 864 aa15.07■□□□□ 0
SCG2-201ENST00000305409 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
SCG2-201ENST00000305409 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
SCG2-201ENST00000305409 SLC26A8Q96RN1 970 aa15.06■□□□□ 0
SCG2-201ENST00000305409 NUTM2FA1L443 756 aa15.05■□□□□ 0
SCG2-201ENST00000305409 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.05■□□□□ 0
SCG2-201ENST00000305409 EXOC6Q8TAG9 804 aa15.05■□□□□ 0
SCG2-201ENST00000305409 PUS7Q96PZ0 661 aaKnown RBP15.05■□□□□ -0
SCG2-201ENST00000305409 FYB1O15117 783 aa15.04■□□□□ -0
SCG2-201ENST00000305409 TERF2IPQ9NYB0 399 aa15.04■□□□□ -0
SCG2-201ENST00000305409 GOLGA2Q08379 1002 aa15.03■□□□□ -0
SCG2-201ENST00000305409 DUSP27Q5VZP5 1158 aa15.03■□□□□ -0
SCG2-201ENST00000305409 CCDC136Q96JN2 1154 aa15.03■□□□□ -0
SCG2-201ENST00000305409 ATAD2Q6PL18 1390 aa15.03■□□□□ -0
SCG2-201ENST00000305409 INSRP06213 1382 aa15.02■□□□□ -0
SCG2-201ENST00000305409 TMEM2Q9UHN6 1383 aa15.02■□□□□ -0
SCG2-201ENST00000305409 POLR3AO14802 1390 aaPredicted RBP15.02□□□□□ -0.01
SCG2-201ENST00000305409 ZNF521Q96K83 1311 aa15.02□□□□□ -0.01
SCG2-201ENST00000305409 HDGFL2Q7Z4V5 671 aaPredicted RBP15.02□□□□□ -0.01
SCG2-201ENST00000305409 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
SCG2-201ENST00000305409 U2AF1L5P0DN76 240 aaPredicted RBP15.01□□□□□ -0.01
SCG2-201ENST00000305409 HDGFP51858 240 aaKnown RBP15.01□□□□□ -0.01
SCG2-201ENST00000305409 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCG2-201ENST00000305409 ABCC11Q96J66 1382 aa15□□□□□ -0.01
SCG2-201ENST00000305409 CD163L1Q9NR16 1453 aa15□□□□□ -0.01
SCG2-201ENST00000305409 WASLO00401 505 aaPredicted RBP15□□□□□ -0.01
SCG2-201ENST00000305409 U2SURPO15042 1029 aaKnown RBP15□□□□□ -0.01
SCG2-201ENST00000305409 C20orf194Q5TEA3 1177 aa15□□□□□ -0.01
SCG2-201ENST00000305409 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
SCG2-201ENST00000305409 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
SCG2-201ENST00000305409 SLFN5Q08AF3 891 aa14.99□□□□□ -0.01
SCG2-201ENST00000305409 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
SCG2-201ENST00000305409 NRXN3Q9Y4C0 1643 aa14.98□□□□□ -0.01
SCG2-201ENST00000305409 RBM19Q9Y4C8 960 aaKnown RBP14.98□□□□□ -0.01
SCG2-201ENST00000305409 NUDT16Q96DE0 195 aaKnown RBP14.97□□□□□ -0.01
SCG2-201ENST00000305409 ROBO2Q9HCK4 1378 aa14.97□□□□□ -0.01
SCG2-201ENST00000305409 WWC1Q8IX03 1113 aa14.96□□□□□ -0.01
SCG2-201ENST00000305409 NME9Q86XW9 330 aa14.96□□□□□ -0.01
SCG2-201ENST00000305409 CRBNQ96SW2 442 aa14.96□□□□□ -0.01
SCG2-201ENST00000305409 RUNDC1Q96C34 613 aa14.95□□□□□ -0.02
SCG2-201ENST00000305409 NINLQ9Y2I6 1382 aa14.95□□□□□ -0.02
SCG2-201ENST00000305409 EID1Q9Y6B2 187 aa14.95□□□□□ -0.02
SCG2-201ENST00000305409 SETD1AO15047 1707 aaKnown RBP14.94□□□□□ -0.02
SCG2-201ENST00000305409 NSD2O96028 1365 aa14.94□□□□□ -0.02
SCG2-201ENST00000305409 ADAMTS13Q76LX8 1427 aa14.94□□□□□ -0.02
SCG2-201ENST00000305409 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
SCG2-201ENST00000305409 PPIP5K1Q6PFW1 1433 aa14.93□□□□□ -0.02
SCG2-201ENST00000305409 BCAR3O75815 825 aa14.93□□□□□ -0.02
SCG2-201ENST00000305409 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
SCG2-201ENST00000305409 AMOTL2Q9Y2J4 779 aa14.92□□□□□ -0.02
SCG2-201ENST00000305409 CCDC61Q9Y6R9 512 aa14.92□□□□□ -0.02
SCG2-201ENST00000305409 NLRP1Q9C000 1473 aa14.92□□□□□ -0.02
SCG2-201ENST00000305409 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
SCG2-201ENST00000305409 TRMT2AQ8IZ69 625 aaKnown RBP14.91□□□□□ -0.02
SCG2-201ENST00000305409 SHPRHQ149N8 1683 aa14.91□□□□□ -0.02
SCG2-201ENST00000305409 E9PSI1 815 aa14.91□□□□□ -0.02
SCG2-201ENST00000305409 EMILIN1Q9Y6C2 1016 aa14.91□□□□□ -0.02
SCG2-201ENST00000305409 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
SCG2-201ENST00000305409 SKAP1Q86WV1 359 aa14.9□□□□□ -0.02
SCG2-201ENST00000305409 PTPRUQ92729 1446 aa14.9□□□□□ -0.02
SCG2-201ENST00000305409 RBM33Q96EV2 1170 aaKnown RBP14.9□□□□□ -0.02
SCG2-201ENST00000305409 POLKQ9UBT6 870 aa14.9□□□□□ -0.02
SCG2-201ENST00000305409 PLEKHG1Q9ULL1 1385 aa14.89□□□□□ -0.03
SCG2-201ENST00000305409 RRS1Q15050 365 aaKnown RBP14.89□□□□□ -0.03
SCG2-201ENST00000305409 SOX12O15370 315 aa14.89□□□□□ -0.03
SCG2-201ENST00000305409 THEMISQ8N1K5 641 aaPredicted RBP14.89□□□□□ -0.03
SCG2-201ENST00000305409 DIAPH1O60610 1272 aaKnown RBP14.88□□□□□ -0.03
SCG2-201ENST00000305409 PMFBP1Q8TBY8 1022 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms