RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 CENPJQ9HC77 1338 aaPredicted RBP9.58□□□□□ -0.88
RGPD3-201ENST00000304514 KDM2BQ8NHM5 1336 aa9.58□□□□□ -0.88
RGPD3-201ENST00000304514 MON2Q7Z3U7 1717 aa9.58□□□□□ -0.88
RGPD3-201ENST00000304514 NLRP1Q9C000 1473 aa9.58□□□□□ -0.88
RGPD3-201ENST00000304514 MED14O60244 1454 aa9.57□□□□□ -0.88
RGPD3-201ENST00000304514 SLFN5Q08AF3 891 aa9.57□□□□□ -0.88
RGPD3-201ENST00000304514 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
RGPD3-201ENST00000304514 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
RGPD3-201ENST00000304514 NPM1P06748 294 aaKnown RBP eCLIP9.56□□□□□ -0.88
RGPD3-201ENST00000304514 PUS7Q96PZ0 661 aaKnown RBP9.56□□□□□ -0.88
RGPD3-201ENST00000304514 MYT1LQ9UL68 1186 aa9.56□□□□□ -0.88
RGPD3-201ENST00000304514 ANKRD36BQ8N2N9 1353 aa9.55□□□□□ -0.88
RGPD3-201ENST00000304514 WDR43Q15061 677 aaKnown RBP eCLIP9.55□□□□□ -0.88
RGPD3-201ENST00000304514 CRBNQ96SW2 442 aa9.55□□□□□ -0.88
RGPD3-201ENST00000304514 NRKQ7Z2Y5 1582 aa9.55□□□□□ -0.88
RGPD3-201ENST00000304514 NSD2O96028 1365 aa9.55□□□□□ -0.88
RGPD3-201ENST00000304514 PLIN1O60240 522 aa9.55□□□□□ -0.88
RGPD3-201ENST00000304514 RAPGEF3O95398 923 aa9.55□□□□□ -0.88
RGPD3-201ENST00000304514 C20orf194Q5TEA3 1177 aa9.55□□□□□ -0.88
RGPD3-201ENST00000304514 UBR1Q8IWV7 1749 aa9.55□□□□□ -0.88
RGPD3-201ENST00000304514 ITSN1Q15811 1721 aa9.54□□□□□ -0.88
RGPD3-201ENST00000304514 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
RGPD3-201ENST00000304514 NINLQ9Y2I6 1382 aa9.54□□□□□ -0.88
RGPD3-201ENST00000304514 C3P01024 1663 aa9.53□□□□□ -0.88
RGPD3-201ENST00000304514 GGT6Q6P531 493 aa9.53□□□□□ -0.88
RGPD3-201ENST00000304514 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
RGPD3-201ENST00000304514 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
RGPD3-201ENST00000304514 ABCC11Q96J66 1382 aa9.52□□□□□ -0.89
RGPD3-201ENST00000304514 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.89
RGPD3-201ENST00000304514 RIMS1Q86UR5 1692 aaKnown RBP9.52□□□□□ -0.89
RGPD3-201ENST00000304514 YTHDC2Q9H6S0 1430 aaKnown RBP9.52□□□□□ -0.89
RGPD3-201ENST00000304514 CPS1P31327 1500 aa9.52□□□□□ -0.89
RGPD3-201ENST00000304514 A2ML1A8K2U0 1454 aa9.52□□□□□ -0.89
RGPD3-201ENST00000304514 TRAK1Q9UPV9 953 aa9.52□□□□□ -0.89
RGPD3-201ENST00000304514 TCERG1O14776 1098 aaKnown RBP9.51□□□□□ -0.89
RGPD3-201ENST00000304514 TMEM132EQ6IEE7 984 aa9.51□□□□□ -0.89
RGPD3-201ENST00000304514 PHF23Q9BUL5 403 aaPredicted RBP9.51□□□□□ -0.89
RGPD3-201ENST00000304514 A0A1W2PP64 1363 aa9.51□□□□□ -0.89
RGPD3-201ENST00000304514 MS4A1P11836 297 aa9.51□□□□□ -0.89
RGPD3-201ENST00000304514 NALCNQ8IZF0 1738 aa9.51□□□□□ -0.89
RGPD3-201ENST00000304514 MAP2P11137 1827 aaKnown RBP9.5□□□□□ -0.89
RGPD3-201ENST00000304514 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
RGPD3-201ENST00000304514 SLC12A5Q9H2X9 1139 aa9.49□□□□□ -0.89
RGPD3-201ENST00000304514 DLG5Q8TDM6 1919 aa9.49□□□□□ -0.89
RGPD3-201ENST00000304514 E9PSI1 815 aa9.49□□□□□ -0.89
RGPD3-201ENST00000304514 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
RGPD3-201ENST00000304514 NOP58Q9Y2X3 529 aaKnown RBP9.49□□□□□ -0.89
RGPD3-201ENST00000304514 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
RGPD3-201ENST00000304514 IDI1Q13907 227 aa9.48□□□□□ -0.89
RGPD3-201ENST00000304514 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
RGPD3-201ENST00000304514 IPO9Q96P70 1041 aaKnown RBP9.48□□□□□ -0.89
RGPD3-201ENST00000304514 APAF1O14727 1248 aa9.48□□□□□ -0.89
RGPD3-201ENST00000304514 BACH2Q9BYV9 841 aa9.48□□□□□ -0.89
RGPD3-201ENST00000304514 ATP7BP35670 1465 aa9.48□□□□□ -0.89
RGPD3-201ENST00000304514 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
RGPD3-201ENST00000304514 WWC1Q8IX03 1113 aa9.48□□□□□ -0.89
RGPD3-201ENST00000304514 SLC52A1Q9NWF4 448 aa9.48□□□□□ -0.89
RGPD3-201ENST00000304514 CGNL1Q0VF96 1302 aa9.48□□□□□ -0.89
RGPD3-201ENST00000304514 FMN2Q9NZ56 1722 aa9.47□□□□□ -0.89
RGPD3-201ENST00000304514 PAK3O75914 559 aaPredicted RBP9.47□□□□□ -0.89
RGPD3-201ENST00000304514 LRRC7Q96NW7 1537 aa9.47□□□□□ -0.89
RGPD3-201ENST00000304514 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
RGPD3-201ENST00000304514 PDE4AP27815 886 aa9.47□□□□□ -0.89
RGPD3-201ENST00000304514 CCDC27Q2M243 656 aa9.46□□□□□ -0.89
RGPD3-201ENST00000304514 RGPD1P0DJD0 1748 aa9.46□□□□□ -0.89
RGPD3-201ENST00000304514 MORC1Q86VD1 984 aa9.46□□□□□ -0.9
RGPD3-201ENST00000304514 CENPQQ7L2Z9 268 aaPredicted RBP9.46□□□□□ -0.9
RGPD3-201ENST00000304514 RUNDC1Q96C34 613 aa9.45□□□□□ -0.9
RGPD3-201ENST00000304514 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.45□□□□□ -0.9
RGPD3-201ENST00000304514 SKAP1Q86WV1 359 aa9.45□□□□□ -0.9
RGPD3-201ENST00000304514 PLEKHF1Q96S99 279 aa9.45□□□□□ -0.9
RGPD3-201ENST00000304514 PNPLA6Q8IY17 1366 aa9.45□□□□□ -0.9
RGPD3-201ENST00000304514 BCAR3O75815 825 aa9.45□□□□□ -0.9
RGPD3-201ENST00000304514 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
RGPD3-201ENST00000304514 MARF1Q9Y4F3 1742 aaKnown RBP9.45□□□□□ -0.9
RGPD3-201ENST00000304514 ATAD2Q6PL18 1390 aa9.44□□□□□ -0.9
RGPD3-201ENST00000304514 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
RGPD3-201ENST00000304514 RIMS2Q9UQ26 1411 aa9.44□□□□□ -0.9
RGPD3-201ENST00000304514 USP54Q70EL1 1684 aa9.44□□□□□ -0.9
RGPD3-201ENST00000304514 PEAK1Q9H792 1746 aa9.43□□□□□ -0.9
RGPD3-201ENST00000304514 WDR63Q8IWG1 891 aa9.43□□□□□ -0.9
RGPD3-201ENST00000304514 ANP32AP39687 249 aaKnown RBP9.42□□□□□ -0.9
RGPD3-201ENST00000304514 FBXO31Q5XUX0 539 aaPredicted RBP9.42□□□□□ -0.9
RGPD3-201ENST00000304514 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
RGPD3-201ENST00000304514 C8orf34Q49A92 452 aa9.42□□□□□ -0.9
RGPD3-201ENST00000304514 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.42□□□□□ -0.9
RGPD3-201ENST00000304514 TECPR2O15040 1411 aa9.42□□□□□ -0.9
RGPD3-201ENST00000304514 MTHFSP49914 203 aa9.42□□□□□ -0.9
RGPD3-201ENST00000304514 FAM135BQ49AJ0 1406 aa9.41□□□□□ -0.9
RGPD3-201ENST00000304514 PDE3AQ14432 1141 aa9.4□□□□□ -0.9
RGPD3-201ENST00000304514 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
RGPD3-201ENST00000304514 TCP11L2Q8N4U5 519 aa9.4□□□□□ -0.9
RGPD3-201ENST00000304514 PRAM1Q96QH2 718 aa9.4□□□□□ -0.9
RGPD3-201ENST00000304514 IGHDP01880 384 aa9.39□□□□□ -0.91
RGPD3-201ENST00000304514 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
RGPD3-201ENST00000304514 FER1L4A9Z1Z3 1794 aa9.39□□□□□ -0.91
RGPD3-201ENST00000304514 CDK12Q9NYV4 1490 aaPredicted RBP9.39□□□□□ -0.91
RGPD3-201ENST00000304514 TNNT2P45379 298 aaPredicted RBP9.39□□□□□ -0.91
RGPD3-201ENST00000304514 ZMYM3Q14202 1370 aa9.39□□□□□ -0.91
RGPD3-201ENST00000304514 FYB1O15117 783 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms