RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 RRP7AQ9Y3A4 280 aaKnown RBP24.5■■□□□ 1.51
RNF139-201ENST00000303545 ERICH6Q7L0X2 663 aa24.49■■□□□ 1.51
RNF139-201ENST00000303545 ARHGEF28Q8N1W1 1705 aaKnown RBP24.49■■□□□ 1.51
RNF139-201ENST00000303545 SLC52A1Q9NWF4 448 aa24.49■■□□□ 1.51
RNF139-201ENST00000303545 MINK1Q8N4C8 1332 aaPredicted RBP24.49■■□□□ 1.51
RNF139-201ENST00000303545 TULP4Q9NRJ4 1543 aa24.48■■□□□ 1.51
RNF139-201ENST00000303545 ARHGAP31Q2M1Z3 1444 aa24.48■■□□□ 1.51
RNF139-201ENST00000303545 SRPK2P78362 688 aaKnown RBP24.48■■□□□ 1.51
RNF139-201ENST00000303545 STAG3Q9UJ98 1225 aa24.48■■□□□ 1.51
RNF139-201ENST00000303545 RIMBP3CA6NJZ7 1639 aa24.48■■□□□ 1.51
RNF139-201ENST00000303545 RIMBP3BA6NNM3 1639 aa24.48■■□□□ 1.51
RNF139-201ENST00000303545 RIMBP3Q9UFD9 1639 aa24.48■■□□□ 1.51
RNF139-201ENST00000303545 MTHFSP49914 203 aa24.47■■□□□ 1.51
RNF139-201ENST00000303545 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
RNF139-201ENST00000303545 CGNL1Q0VF96 1302 aa24.45■■□□□ 1.5
RNF139-201ENST00000303545 BCAR3O75815 825 aa24.44■■□□□ 1.5
RNF139-201ENST00000303545 PRAM1Q96QH2 718 aa24.44■■□□□ 1.5
RNF139-201ENST00000303545 POLR3AO14802 1390 aaPredicted RBP24.43■■□□□ 1.5
RNF139-201ENST00000303545 POGKQ9P215 609 aa24.42■■□□□ 1.5
RNF139-201ENST00000303545 TMEM131LA2VDJ0 1609 aa24.41■■□□□ 1.5
RNF139-201ENST00000303545 TRMT2AQ8IZ69 625 aaKnown RBP24.4■■□□□ 1.5
RNF139-201ENST00000303545 DIP2BQ9P265 1576 aa24.4■■□□□ 1.5
RNF139-201ENST00000303545 NPM2Q86SE8 214 aaKnown RBP24.4■■□□□ 1.5
RNF139-201ENST00000303545 GGNBP2Q9H3C7 697 aa24.39■■□□□ 1.5
RNF139-201ENST00000303545 WWC1Q8IX03 1113 aa24.39■■□□□ 1.49
RNF139-201ENST00000303545 SHPRHQ149N8 1683 aa24.38■■□□□ 1.49
RNF139-201ENST00000303545 ANKRD36BQ8N2N9 1353 aa24.38■■□□□ 1.49
RNF139-201ENST00000303545 E9PSI1 815 aa24.37■■□□□ 1.49
RNF139-201ENST00000303545 TCP11L2Q8N4U5 519 aa24.37■■□□□ 1.49
RNF139-201ENST00000303545 A0A1W2PP64 1363 aa24.36■■□□□ 1.49
RNF139-201ENST00000303545 NKTRP30414 1462 aaKnown RBP24.36■■□□□ 1.49
RNF139-201ENST00000303545 PAK3O75914 559 aaPredicted RBP24.35■■□□□ 1.49
RNF139-201ENST00000303545 TCERG1O14776 1098 aaKnown RBP24.34■■□□□ 1.49
RNF139-201ENST00000303545 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.34■■□□□ 1.49
RNF139-201ENST00000303545 RUNDC1Q96C34 613 aa24.34■■□□□ 1.49
RNF139-201ENST00000303545 YTHDC2Q9H6S0 1430 aaKnown RBP24.34■■□□□ 1.49
RNF139-201ENST00000303545 U2AF1L5P0DN76 240 aaPredicted RBP24.33■■□□□ 1.49
RNF139-201ENST00000303545 U2AF1Q01081 240 aaKnown RBP eCLIP24.33■■□□□ 1.49
RNF139-201ENST00000303545 CFAP53Q96M91 514 aa24.33■■□□□ 1.49
RNF139-201ENST00000303545 ZFYVE9O95405 1425 aa24.33■■□□□ 1.49
RNF139-201ENST00000303545 PTPRMP28827 1452 aa24.33■■□□□ 1.48
RNF139-201ENST00000303545 PDE4AP27815 886 aa24.32■■□□□ 1.48
RNF139-201ENST00000303545 CLTCQ00610 1675 aaKnown RBP24.32■■□□□ 1.48
RNF139-201ENST00000303545 ANP32AP39687 249 aaKnown RBP24.32■■□□□ 1.48
RNF139-201ENST00000303545 WAPLQ7Z5K2 1190 aa24.32■■□□□ 1.48
RNF139-201ENST00000303545 CDK19Q9BWU1 502 aa24.3■■□□□ 1.48
RNF139-201ENST00000303545 U2SURPO15042 1029 aaKnown RBP24.29■■□□□ 1.48
RNF139-201ENST00000303545 NOP58Q9Y2X3 529 aaKnown RBP24.29■■□□□ 1.48
RNF139-201ENST00000303545 USP32Q8NFA0 1604 aa24.28■■□□□ 1.48
RNF139-201ENST00000303545 ALKQ9UM73 1620 aa24.28■■□□□ 1.48
RNF139-201ENST00000303545 PUS7Q96PZ0 661 aaKnown RBP24.28■■□□□ 1.48
RNF139-201ENST00000303545 CABP1Q9NZU7 370 aa24.28■■□□□ 1.48
RNF139-201ENST00000303545 FRAT1Q92837 279 aaPredicted RBP24.27■■□□□ 1.48
RNF139-201ENST00000303545 CANXP27824 592 aaKnown RBP24.27■■□□□ 1.48
RNF139-201ENST00000303545 FBLN1P23142 703 aa24.26■■□□□ 1.47
RNF139-201ENST00000303545 BCL2L13Q9BXK5 485 aa24.26■■□□□ 1.47
RNF139-201ENST00000303545 KDM2BQ8NHM5 1336 aa24.26■■□□□ 1.47
RNF139-201ENST00000303545 FYB1O15117 783 aa24.26■■□□□ 1.47
RNF139-201ENST00000303545 PANK1Q8TE04 598 aa24.25■■□□□ 1.47
RNF139-201ENST00000303545 BACH2Q9BYV9 841 aa24.25■■□□□ 1.47
RNF139-201ENST00000303545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.24■■□□□ 1.47
RNF139-201ENST00000303545 IPO9Q96P70 1041 aaKnown RBP24.24■■□□□ 1.47
RNF139-201ENST00000303545 TERF2IPQ9NYB0 399 aa24.24■■□□□ 1.47
RNF139-201ENST00000303545 ABCC11Q96J66 1382 aa24.24■■□□□ 1.47
RNF139-201ENST00000303545 IQSEC2Q5JU85 1478 aa24.22■■□□□ 1.47
RNF139-201ENST00000303545 COG6Q9Y2V7 657 aa24.22■■□□□ 1.47
RNF139-201ENST00000303545 CD163L1Q9NR16 1453 aa24.21■■□□□ 1.47
RNF139-201ENST00000303545 NSD2O96028 1365 aa24.21■■□□□ 1.47
RNF139-201ENST00000303545 TNNQ9UQP3 1299 aa24.21■■□□□ 1.47
RNF139-201ENST00000303545 A2ML1A8K2U0 1454 aa24.21■■□□□ 1.47
RNF139-201ENST00000303545 ATAD2Q6PL18 1390 aa24.21■■□□□ 1.47
RNF139-201ENST00000303545 NGEFQ8N5V2 710 aa24.21■■□□□ 1.47
RNF139-201ENST00000303545 RIMS2Q9UQ26 1411 aa24.21■■□□□ 1.47
RNF139-201ENST00000303545 CENPQQ7L2Z9 268 aaPredicted RBP24.2■■□□□ 1.47
RNF139-201ENST00000303545 PPM1GO15355 546 aaPredicted RBP24.2■■□□□ 1.46
RNF139-201ENST00000303545 RGS3P49796 1198 aa24.2■■□□□ 1.46
RNF139-201ENST00000303545 MS4A1P11836 297 aa24.19■■□□□ 1.46
RNF139-201ENST00000303545 HDGFL2Q7Z4V5 671 aaPredicted RBP24.19■■□□□ 1.46
RNF139-201ENST00000303545 ESF1Q9H501 851 aaKnown RBP24.19■■□□□ 1.46
RNF139-201ENST00000303545 NBR1Q14596 966 aa24.17■■□□□ 1.46
RNF139-201ENST00000303545 ZBTB47Q9UFB7 747 aaPredicted RBP24.17■■□□□ 1.46
RNF139-201ENST00000303545 TSR2Q969E8 191 aaKnown RBP24.16■■□□□ 1.46
RNF139-201ENST00000303545 RARSP54136 660 aaKnown RBP24.16■■□□□ 1.46
RNF139-201ENST00000303545 TXNDC2Q86VQ3 553 aa24.16■■□□□ 1.46
RNF139-201ENST00000303545 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
RNF139-201ENST00000303545 AGLP35573 1532 aa24.15■■□□□ 1.46
RNF139-201ENST00000303545 NINLQ9Y2I6 1382 aa24.15■■□□□ 1.46
RNF139-201ENST00000303545 IGHDP01880 384 aa24.15■■□□□ 1.46
RNF139-201ENST00000303545 ARHGEF40Q8TER5 1519 aa24.15■■□□□ 1.46
RNF139-201ENST00000303545 NCKAP5LQ9HCH0 1330 aa24.15■■□□□ 1.46
RNF139-201ENST00000303545 WDR63Q8IWG1 891 aa24.14■■□□□ 1.46
RNF139-201ENST00000303545 CLUAP1Q96AJ1 413 aa24.14■■□□□ 1.46
RNF139-201ENST00000303545 PLPPR3Q6T4P5 718 aa24.13■■□□□ 1.45
RNF139-201ENST00000303545 PPP6R1Q9UPN7 881 aa24.13■■□□□ 1.45
RNF139-201ENST00000303545 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
RNF139-201ENST00000303545 BCL11AQ9H165 835 aa24.12■■□□□ 1.45
RNF139-201ENST00000303545 METP08581 1390 aa24.12■■□□□ 1.45
RNF139-201ENST00000303545 ZMYM3Q14202 1370 aa24.11■■□□□ 1.45
RNF139-201ENST00000303545 NLRP1Q9C000 1473 aa24.11■■□□□ 1.45
RNF139-201ENST00000303545 RLBP1P12271 317 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms