RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 CAMSAP2Q08AD1 1489 aa8.04□□□□□ -1.12
SCAPER-201ENST00000303521 RCAN3Q9UKA8 241 aa8.04□□□□□ -1.12
SCAPER-201ENST00000303521 FBXO31Q5XUX0 539 aaPredicted RBP8.03□□□□□ -1.12
SCAPER-201ENST00000303521 KRT28Q7Z3Y7 464 aa8.03□□□□□ -1.12
SCAPER-201ENST00000303521 SPG7Q9UQ90 795 aa8.03□□□□□ -1.12
SCAPER-201ENST00000303521 NUP153P49790 1475 aaKnown RBP8.03□□□□□ -1.12
SCAPER-201ENST00000303521 CGNL1Q0VF96 1302 aa8.03□□□□□ -1.12
SCAPER-201ENST00000303521 DISP1Q96F81 1524 aa8.03□□□□□ -1.12
SCAPER-201ENST00000303521 MSNP26038 577 aaKnown RBP8.03□□□□□ -1.12
SCAPER-201ENST00000303521 RALBP1Q15311 655 aa8.03□□□□□ -1.12
SCAPER-201ENST00000303521 SLAIN2Q9P270 581 aa8.03□□□□□ -1.12
SCAPER-201ENST00000303521 ARAP3Q8WWN8 1544 aa8.03□□□□□ -1.12
SCAPER-201ENST00000303521 GOLGA6L3A6NEY3 463 aa8.03□□□□□ -1.12
SCAPER-201ENST00000303521 EXOC5O00471 708 aa8.02□□□□□ -1.12
SCAPER-201ENST00000303521 LTV1Q96GA3 475 aaPredicted RBP8.02□□□□□ -1.12
SCAPER-201ENST00000303521 RIMS2Q9UQ26 1411 aa8.02□□□□□ -1.13
SCAPER-201ENST00000303521 MYH16Q9H6N6 1097 aa8.02□□□□□ -1.13
SCAPER-201ENST00000303521 USP21Q9UK80 565 aa8.02□□□□□ -1.13
SCAPER-201ENST00000303521 ZNF330Q9Y3S2 320 aaPredicted RBP8.02□□□□□ -1.13
SCAPER-201ENST00000303521 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
SCAPER-201ENST00000303521 PTMAP06454 111 aaKnown RBP8.02□□□□□ -1.13
SCAPER-201ENST00000303521 HSCBQ8IWL3 235 aa8.02□□□□□ -1.13
SCAPER-201ENST00000303521 RGS3P49796 1198 aa8.01□□□□□ -1.13
SCAPER-201ENST00000303521 ARHGEF10O15013 1369 aa8.01□□□□□ -1.13
SCAPER-201ENST00000303521 HSP90AA2PQ14568 343 aaPredicted RBP8.01□□□□□ -1.13
SCAPER-201ENST00000303521 TEFQ10587 303 aa8.01□□□□□ -1.13
SCAPER-201ENST00000303521 SPATA31A6Q5VVP1 1343 aa8.01□□□□□ -1.13
SCAPER-201ENST00000303521 IDI1Q13907 227 aa8□□□□□ -1.13
SCAPER-201ENST00000303521 MLH3Q9UHC1 1453 aa8□□□□□ -1.13
SCAPER-201ENST00000303521 ATAD2Q6PL18 1390 aa8□□□□□ -1.13
SCAPER-201ENST00000303521 KTN1Q86UP2 1357 aaKnown RBP8□□□□□ -1.13
SCAPER-201ENST00000303521 PDE4AP27815 886 aa8□□□□□ -1.13
SCAPER-201ENST00000303521 PLEKHO1Q53GL0 409 aaPredicted RBP8□□□□□ -1.13
SCAPER-201ENST00000303521 CCDC125Q86Z20 511 aa8□□□□□ -1.13
SCAPER-201ENST00000303521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.99□□□□□ -1.131e-6■■■■□ 22.6
SCAPER-201ENST00000303521 SMARCC1Q92922 1105 aaPredicted RBP7.99□□□□□ -1.13
SCAPER-201ENST00000303521 ZCCHC11Q5TAX3 1644 aaKnown RBP7.99□□□□□ -1.13
SCAPER-201ENST00000303521 ATP7AQ04656 1500 aa7.99□□□□□ -1.13
SCAPER-201ENST00000303521 GBP4Q96PP9 640 aa7.99□□□□□ -1.13
SCAPER-201ENST00000303521 JCADQ9P266 1359 aa7.99□□□□□ -1.13
SCAPER-201ENST00000303521 DNTTIP2Q5QJE6 756 aaKnown RBP7.99□□□□□ -1.13
SCAPER-201ENST00000303521 PTPRMP28827 1452 aa7.99□□□□□ -1.13
SCAPER-201ENST00000303521 CFAP44Q96MT7 982 aa7.98□□□□□ -1.13
SCAPER-201ENST00000303521 RBM6P78332 1123 aaKnown RBP7.98□□□□□ -1.13
SCAPER-201ENST00000303521 PRAM1Q96QH2 718 aa7.98□□□□□ -1.13
SCAPER-201ENST00000303521 CASC1Q6TDU7 716 aa7.98□□□□□ -1.13
SCAPER-201ENST00000303521 QTRT2Q9H974 415 aaKnown RBP7.98□□□□□ -1.13
SCAPER-201ENST00000303521 PIK3R4Q99570 1358 aa7.98□□□□□ -1.13
SCAPER-201ENST00000303521 GPATCH8Q9UKJ3 1502 aaKnown RBP7.98□□□□□ -1.13
SCAPER-201ENST00000303521 CCDC61Q9Y6R9 512 aa7.97□□□□□ -1.13
SCAPER-201ENST00000303521 NAIPQ13075 1403 aa7.97□□□□□ -1.13
SCAPER-201ENST00000303521 CDK11BP21127 795 aaKnown RBP7.97□□□□□ -1.13
SCAPER-201ENST00000303521 CCDC184Q52MB2 194 aa7.97□□□□□ -1.13
SCAPER-201ENST00000303521 FLAD1Q8NFF5 587 aa7.97□□□□□ -1.13
SCAPER-201ENST00000303521 WWC1Q8IX03 1113 aa7.96□□□□□ -1.13
SCAPER-201ENST00000303521 SYCP2Q9BX26 1530 aa7.96□□□□□ -1.13
SCAPER-201ENST00000303521 PTPRTO14522 1441 aa7.96□□□□□ -1.13
SCAPER-201ENST00000303521 SPATA31E1Q6ZUB1 1445 aa7.96□□□□□ -1.13
SCAPER-201ENST00000303521 FAM161AQ3B820 660 aa7.96□□□□□ -1.14
SCAPER-201ENST00000303521 CENPQQ7L2Z9 268 aaPredicted RBP7.96□□□□□ -1.14
SCAPER-201ENST00000303521 A2ML1A8K2U0 1454 aa7.96□□□□□ -1.14
SCAPER-201ENST00000303521 E9PCH4 1651 aa7.96□□□□□ -1.14
SCAPER-201ENST00000303521 RRP1P56182 461 aaKnown RBP7.96□□□□□ -1.14
SCAPER-201ENST00000303521 FTSJ3Q8IY81 847 aaKnown RBP7.96□□□□□ -1.14
SCAPER-201ENST00000303521 PMFBP1Q8TBY8 1022 aa7.96□□□□□ -1.14
SCAPER-201ENST00000303521 HECW2Q9P2P5 1572 aa7.95□□□□□ -1.14
SCAPER-201ENST00000303521 FOXO3O43524 673 aa7.95□□□□□ -1.14
SCAPER-201ENST00000303521 CHAF1AQ13111 956 aaPredicted RBP7.95□□□□□ -1.14
SCAPER-201ENST00000303521 FAM43AQ8N2R8 423 aa7.95□□□□□ -1.14
SCAPER-201ENST00000303521 AK7Q96M32 723 aa7.95□□□□□ -1.14
SCAPER-201ENST00000303521 PRKRIP1Q9H875 184 aaPredicted RBP7.95□□□□□ -1.14
SCAPER-201ENST00000303521 DDX11L8A8MPP1 907 aa7.95□□□□□ -1.14
SCAPER-201ENST00000303521 TAF7LQ5H9L4 462 aa7.95□□□□□ -1.14
SCAPER-201ENST00000303521 TMEM2Q9UHN6 1383 aa7.95□□□□□ -1.14
SCAPER-201ENST00000303521 SCAF11Q99590 1463 aaKnown RBP7.95□□□□□ -1.14
SCAPER-201ENST00000303521 VSIG10Q8N0Z9 540 aa7.95□□□□□ -1.14
SCAPER-201ENST00000303521 A0A087WZG4 1122 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 DDB1Q16531 1140 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 STK31Q9BXU1 1019 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 ZNF652Q9Y2D9 606 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 ERCC6L2Q5T890 1561 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 KDM5DQ9BY66 1539 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 RBM33Q96EV2 1170 aaKnown RBP7.94□□□□□ -1.14
SCAPER-201ENST00000303521 CDK19Q9BWU1 502 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 UGGT1Q9NYU2 1555 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 BEGAINQ9BUH8 593 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 DIP2BQ9P265 1576 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 MYO5CQ9NQX4 1742 aa7.94□□□□□ -1.14
SCAPER-201ENST00000303521 MBD5Q9P267 1494 aa7.93□□□□□ -1.14
SCAPER-201ENST00000303521 FAM196AQ6ZSG2 479 aa7.93□□□□□ -1.14
SCAPER-201ENST00000303521 TCOF1Q13428 1488 aaKnown RBP7.93□□□□□ -1.14
SCAPER-201ENST00000303521 SHANK2Q9UPX8 1470 aa7.93□□□□□ -1.14
SCAPER-201ENST00000303521 MYBBP1AQ9BQG0 1328 aaKnown RBP7.93□□□□□ -1.14
SCAPER-201ENST00000303521 TMEM94Q12767 1356 aa7.93□□□□□ -1.14
SCAPER-201ENST00000303521 ILDR1Q86SU0 546 aaPredicted RBP7.92□□□□□ -1.14
SCAPER-201ENST00000303521 CWC22Q9HCG8 908 aaKnown RBP7.92□□□□□ -1.14
SCAPER-201ENST00000303521 NUDT16Q96DE0 195 aaKnown RBP7.92□□□□□ -1.14
SCAPER-201ENST00000303521 PKNOX2Q96KN3 472 aa7.92□□□□□ -1.14
SCAPER-201ENST00000303521 ZNF335Q9H4Z2 1342 aaPredicted RBP7.92□□□□□ -1.14
SCAPER-201ENST00000303521 TRPM2O94759 1503 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms