RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 NPC1L1Q9UHC9 1359 aa19.45■□□□□ 0.7
SHCBP1-201ENST00000303383 C3P01024 1663 aa19.45■□□□□ 0.7
SHCBP1-201ENST00000303383 WAPLQ7Z5K2 1190 aa19.45■□□□□ 0.7
SHCBP1-201ENST00000303383 NSD3Q9BZ95 1437 aa19.44■□□□□ 0.7
SHCBP1-201ENST00000303383 UBR1Q8IWV7 1749 aa19.44■□□□□ 0.7
SHCBP1-201ENST00000303383 SENP3-EIF4A1A0A087X0R7 540 aa19.44■□□□□ 0.7
SHCBP1-201ENST00000303383 WDR43Q15061 677 aaKnown RBP eCLIP19.44■□□□□ 0.7
SHCBP1-201ENST00000303383 ATAD2Q6PL18 1390 aa19.43■□□□□ 0.7
SHCBP1-201ENST00000303383 TULP4Q9NRJ4 1543 aa19.43■□□□□ 0.7
SHCBP1-201ENST00000303383 MORC1Q86VD1 984 aa19.43■□□□□ 0.7
SHCBP1-201ENST00000303383 CDK19Q9BWU1 502 aa19.42■□□□□ 0.7
SHCBP1-201ENST00000303383 CGNL1Q0VF96 1302 aa19.42■□□□□ 0.7
SHCBP1-201ENST00000303383 ABCC11Q96J66 1382 aa19.42■□□□□ 0.7
SHCBP1-201ENST00000303383 TERF2IPQ9NYB0 399 aa19.41■□□□□ 0.7
SHCBP1-201ENST00000303383 METP08581 1390 aa19.41■□□□□ 0.7
SHCBP1-201ENST00000303383 LTKP29376 864 aa19.41■□□□□ 0.7
SHCBP1-201ENST00000303383 NINLQ9Y2I6 1382 aa19.4■□□□□ 0.7
SHCBP1-201ENST00000303383 ANKRD36BQ8N2N9 1353 aa19.39■□□□□ 0.7
SHCBP1-201ENST00000303383 TNNT2P45379 298 aaPredicted RBP19.39■□□□□ 0.69
SHCBP1-201ENST00000303383 HDGFL2Q7Z4V5 671 aaPredicted RBP19.39■□□□□ 0.69
SHCBP1-201ENST00000303383 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
SHCBP1-201ENST00000303383 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
SHCBP1-201ENST00000303383 FKBP8Q14318 412 aa19.38■□□□□ 0.69
SHCBP1-201ENST00000303383 PLEKHG1Q9ULL1 1385 aa19.38■□□□□ 0.69
SHCBP1-201ENST00000303383 DLC1Q96QB1 1528 aa19.37■□□□□ 0.69
SHCBP1-201ENST00000303383 PLEKHH1Q9ULM0 1364 aa19.36■□□□□ 0.69
SHCBP1-201ENST00000303383 SUPT16HQ9Y5B9 1047 aaKnown RBP19.35■□□□□ 0.69
SHCBP1-201ENST00000303383 RIMS1Q86UR5 1692 aaKnown RBP19.35■□□□□ 0.69
SHCBP1-201ENST00000303383 NRXN3Q9Y4C0 1643 aa19.35■□□□□ 0.69
SHCBP1-201ENST00000303383 CABP1Q9NZU7 370 aa19.34■□□□□ 0.69
SHCBP1-201ENST00000303383 SETD1AO15047 1707 aaKnown RBP19.33■□□□□ 0.68
SHCBP1-201ENST00000303383 WASLO00401 505 aaPredicted RBP19.32■□□□□ 0.68
SHCBP1-201ENST00000303383 A0A1W2PP64 1363 aa19.32■□□□□ 0.68
SHCBP1-201ENST00000303383 SIRT1Q96EB6 747 aa19.32■□□□□ 0.68
SHCBP1-201ENST00000303383 ADAMTS8Q9UP79 889 aa19.32■□□□□ 0.68
SHCBP1-201ENST00000303383 ERICH6Q7L0X2 663 aa19.31■□□□□ 0.68
SHCBP1-201ENST00000303383 ADAMTS13Q76LX8 1427 aa19.31■□□□□ 0.68
SHCBP1-201ENST00000303383 FAM135BQ49AJ0 1406 aa19.3■□□□□ 0.68
SHCBP1-201ENST00000303383 NSD2O96028 1365 aa19.3■□□□□ 0.68
SHCBP1-201ENST00000303383 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
SHCBP1-201ENST00000303383 SLIT1O75093 1534 aa19.29■□□□□ 0.68
SHCBP1-201ENST00000303383 TBX22Q9Y458 520 aa19.28■□□□□ 0.68
SHCBP1-201ENST00000303383 NUDCQ9Y266 331 aa19.28■□□□□ 0.68
SHCBP1-201ENST00000303383 AMOTL2Q9Y2J4 779 aa19.28■□□□□ 0.68
SHCBP1-201ENST00000303383 GGNBP2Q9H3C7 697 aa19.27■□□□□ 0.68
SHCBP1-201ENST00000303383 ARHGAP23Q9P227 1491 aa19.27■□□□□ 0.68
SHCBP1-201ENST00000303383 TECPR2O15040 1411 aa19.27■□□□□ 0.68
SHCBP1-201ENST00000303383 ANKLE2Q86XL3 938 aa19.27■□□□□ 0.68
SHCBP1-201ENST00000303383 NUDT16Q96DE0 195 aaKnown RBP19.26■□□□□ 0.67
SHCBP1-201ENST00000303383 CEP170BQ9Y4F5 1589 aaPredicted RBP19.26■□□□□ 0.67
SHCBP1-201ENST00000303383 ROBO2Q9HCK4 1378 aa19.26■□□□□ 0.67
SHCBP1-201ENST00000303383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.676e-8■■■■□ 26.3
SHCBP1-201ENST00000303383 INSRP06213 1382 aa19.25■□□□□ 0.67
SHCBP1-201ENST00000303383 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
SHCBP1-201ENST00000303383 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
SHCBP1-201ENST00000303383 MTHFSP49914 203 aa19.24■□□□□ 0.67
SHCBP1-201ENST00000303383 CPS1P31327 1500 aa19.24■□□□□ 0.67
SHCBP1-201ENST00000303383 USP32Q8NFA0 1604 aa19.24■□□□□ 0.67
SHCBP1-201ENST00000303383 SMG6Q86US8 1419 aaKnown RBP19.23■□□□□ 0.67
SHCBP1-201ENST00000303383 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
SHCBP1-201ENST00000303383 BLMP54132 1417 aaPredicted RBP19.23■□□□□ 0.67
SHCBP1-201ENST00000303383 PPIP5K1Q6PFW1 1433 aa19.23■□□□□ 0.67
SHCBP1-201ENST00000303383 NUTM2FA1L443 756 aa19.23■□□□□ 0.67
SHCBP1-201ENST00000303383 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
SHCBP1-201ENST00000303383 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
SHCBP1-201ENST00000303383 POLR3AO14802 1390 aaPredicted RBP19.21■□□□□ 0.67
SHCBP1-201ENST00000303383 SETD1BQ9UPS6 1966 aaKnown RBP19.21■□□□□ 0.67
SHCBP1-201ENST00000303383 ADAMTSL3P82987 1691 aa19.21■□□□□ 0.67
SHCBP1-201ENST00000303383 FYB1O15117 783 aa19.21■□□□□ 0.67
SHCBP1-201ENST00000303383 BCL11AQ9H165 835 aa19.21■□□□□ 0.67
SHCBP1-201ENST00000303383 ATP7BP35670 1465 aa19.2■□□□□ 0.66
SHCBP1-201ENST00000303383 MED14O60244 1454 aa19.19■□□□□ 0.66
SHCBP1-201ENST00000303383 PTPRUQ92729 1446 aa19.18■□□□□ 0.66
SHCBP1-201ENST00000303383 CD163L1Q9NR16 1453 aa19.18■□□□□ 0.66
SHCBP1-201ENST00000303383 DIP2AQ14689 1571 aa19.17■□□□□ 0.66
SHCBP1-201ENST00000303383 NCKAP5LQ9HCH0 1330 aa19.17■□□□□ 0.66
SHCBP1-201ENST00000303383 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
SHCBP1-201ENST00000303383 APAF1O14727 1248 aa19.15■□□□□ 0.66
SHCBP1-201ENST00000303383 PPM1GO15355 546 aaPredicted RBP19.15■□□□□ 0.66
SHCBP1-201ENST00000303383 KCNA6P17658 529 aa19.14■□□□□ 0.65
SHCBP1-201ENST00000303383 U2AF1L5P0DN76 240 aaPredicted RBP19.13■□□□□ 0.65
SHCBP1-201ENST00000303383 U2AF1Q01081 240 aaKnown RBP eCLIP19.13■□□□□ 0.65
SHCBP1-201ENST00000303383 EDC4Q6P2E9 1401 aaKnown RBP19.13■□□□□ 0.65
SHCBP1-201ENST00000303383 PIK3R4Q99570 1358 aa19.13■□□□□ 0.65
SHCBP1-201ENST00000303383 U2SURPO15042 1029 aaKnown RBP19.13■□□□□ 0.65
SHCBP1-201ENST00000303383 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
SHCBP1-201ENST00000303383 PTCH1Q13635 1447 aa19.13■□□□□ 0.65
SHCBP1-201ENST00000303383 PRR36Q9H6K5 1346 aa19.13■□□□□ 0.65
SHCBP1-201ENST00000303383 COG3Q96JB2 828 aa19.12■□□□□ 0.65
SHCBP1-201ENST00000303383 NME9Q86XW9 330 aa19.1■□□□□ 0.65
SHCBP1-201ENST00000303383 ZNF142P52746 1687 aaPredicted RBP19.1■□□□□ 0.65
SHCBP1-201ENST00000303383 GOLGA2Q08379 1002 aa19.1■□□□□ 0.65
SHCBP1-201ENST00000303383 NGDNQ8NEJ9 315 aaKnown RBP19.1■□□□□ 0.65
SHCBP1-201ENST00000303383 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.1■□□□□ 0.65
SHCBP1-201ENST00000303383 CPSF1Q10570 1443 aaKnown RBP19.1■□□□□ 0.65
SHCBP1-201ENST00000303383 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
SHCBP1-201ENST00000303383 ACEP12821 1306 aa19.09■□□□□ 0.65
SHCBP1-201ENST00000303383 NEUROD2Q15784 382 aa19.09■□□□□ 0.65
SHCBP1-201ENST00000303383 RUNDC1Q96C34 613 aa19.09■□□□□ 0.65
SHCBP1-201ENST00000303383 NGEFQ8N5V2 710 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms