RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
TPM3-202ENST00000302206 DLC1Q96QB1 1528 aa16.33■□□□□ 0.2
TPM3-202ENST00000302206 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.2
TPM3-202ENST00000302206 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
TPM3-202ENST00000302206 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
TPM3-202ENST00000302206 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
TPM3-202ENST00000302206 TMEM2Q9UHN6 1383 aa16.29■□□□□ 0.2
TPM3-202ENST00000302206 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
TPM3-202ENST00000302206 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
TPM3-202ENST00000302206 KNSTRNQ9Y448 316 aa16.29■□□□□ 0.2
TPM3-202ENST00000302206 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
TPM3-202ENST00000302206 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
TPM3-202ENST00000302206 TULP4Q9NRJ4 1543 aa16.28■□□□□ 0.2
TPM3-202ENST00000302206 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
TPM3-202ENST00000302206 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.2
TPM3-202ENST00000302206 MED14O60244 1454 aa16.27■□□□□ 0.19
TPM3-202ENST00000302206 ABCC11Q96J66 1382 aa16.26■□□□□ 0.19
TPM3-202ENST00000302206 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
TPM3-202ENST00000302206 INSRP06213 1382 aa16.26■□□□□ 0.19
TPM3-202ENST00000302206 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
TPM3-202ENST00000302206 KNDC1Q76NI1 1749 aa16.25■□□□□ 0.19
TPM3-202ENST00000302206 SLIT1O75093 1534 aa16.25■□□□□ 0.19
TPM3-202ENST00000302206 ARHGAP23Q9P227 1491 aa16.25■□□□□ 0.19
TPM3-202ENST00000302206 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
TPM3-202ENST00000302206 PNISRQ8TF01 805 aaKnown RBP16.25■□□□□ 0.19
TPM3-202ENST00000302206 SIRT1Q96EB6 747 aa16.25■□□□□ 0.19
TPM3-202ENST00000302206 USP32Q8NFA0 1604 aa16.24■□□□□ 0.19
TPM3-202ENST00000302206 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
TPM3-202ENST00000302206 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
TPM3-202ENST00000302206 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
TPM3-202ENST00000302206 PLEKHG1Q9ULL1 1385 aa16.24■□□□□ 0.19
TPM3-202ENST00000302206 LRRC7Q96NW7 1537 aa16.24■□□□□ 0.19
TPM3-202ENST00000302206 TECPR2O15040 1411 aa16.23■□□□□ 0.19
TPM3-202ENST00000302206 RGS17Q9UGC6 210 aaPredicted RBP16.23■□□□□ 0.19
TPM3-202ENST00000302206 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
TPM3-202ENST00000302206 STK26Q9P289 416 aa16.22■□□□□ 0.19
TPM3-202ENST00000302206 ZBED9Q6R2W3 1325 aa16.21■□□□□ 0.19
TPM3-202ENST00000302206 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
TPM3-202ENST00000302206 PRAM1Q96QH2 718 aa16.21■□□□□ 0.19
TPM3-202ENST00000302206 POGKQ9P215 609 aa16.21■□□□□ 0.19
TPM3-202ENST00000302206 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.19
TPM3-202ENST00000302206 CNGB1Q14028 1251 aaPredicted RBP16.19■□□□□ 0.18
TPM3-202ENST00000302206 CARD14Q9BXL6 1004 aa16.19■□□□□ 0.18
TPM3-202ENST00000302206 ADAMTS13Q76LX8 1427 aa16.19■□□□□ 0.18
TPM3-202ENST00000302206 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
TPM3-202ENST00000302206 DIP2AQ14689 1571 aa16.17■□□□□ 0.18
TPM3-202ENST00000302206 METP08581 1390 aa16.17■□□□□ 0.18
TPM3-202ENST00000302206 EID1Q9Y6B2 187 aa16.17■□□□□ 0.18
TPM3-202ENST00000302206 NSD2O96028 1365 aa16.16■□□□□ 0.18
TPM3-202ENST00000302206 PPP2R1AP30153 589 aa16.16■□□□□ 0.18
TPM3-202ENST00000302206 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
TPM3-202ENST00000302206 NSD3Q9BZ95 1437 aa16.15■□□□□ 0.18
TPM3-202ENST00000302206 SLC12A5Q9H2X9 1139 aa16.15■□□□□ 0.18
TPM3-202ENST00000302206 LTKP29376 864 aa16.14■□□□□ 0.17
TPM3-202ENST00000302206 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
TPM3-202ENST00000302206 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
TPM3-202ENST00000302206 POTEAQ6S8J7 498 aa16.13■□□□□ 0.17
TPM3-202ENST00000302206 MINK1Q8N4C8 1332 aaPredicted RBP16.13■□□□□ 0.17
TPM3-202ENST00000302206 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
TPM3-202ENST00000302206 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
TPM3-202ENST00000302206 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
TPM3-202ENST00000302206 XIRP1Q702N8 1843 aaKnown RBP16.12■□□□□ 0.17
TPM3-202ENST00000302206 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
TPM3-202ENST00000302206 CDK19Q9BWU1 502 aa16.11■□□□□ 0.17
TPM3-202ENST00000302206 TERF2IPQ9NYB0 399 aa16.11■□□□□ 0.17
TPM3-202ENST00000302206 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
TPM3-202ENST00000302206 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
TPM3-202ENST00000302206 BCANQ96GW7 911 aa16.1■□□□□ 0.17
TPM3-202ENST00000302206 ATP7BP35670 1465 aa16.1■□□□□ 0.17
TPM3-202ENST00000302206 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
TPM3-202ENST00000302206 CD163L1Q9NR16 1453 aa16.09■□□□□ 0.17
TPM3-202ENST00000302206 A0A1W2PP64 1363 aa16.08■□□□□ 0.16
TPM3-202ENST00000302206 PIK3R4Q99570 1358 aa16.08■□□□□ 0.16
TPM3-202ENST00000302206 WASLO00401 505 aaPredicted RBP16.07■□□□□ 0.16
TPM3-202ENST00000302206 PIAS4Q8N2W9 510 aaPredicted RBP16.07■□□□□ 0.16
TPM3-202ENST00000302206 PTCH1Q13635 1447 aa16.07■□□□□ 0.16
TPM3-202ENST00000302206 POLR3AO14802 1390 aaPredicted RBP16.06■□□□□ 0.16
TPM3-202ENST00000302206 ROBO2Q9HCK4 1378 aa16.06■□□□□ 0.16
TPM3-202ENST00000302206 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
TPM3-202ENST00000302206 MORC1Q86VD1 984 aa16.06■□□□□ 0.16
TPM3-202ENST00000302206 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
TPM3-202ENST00000302206 ROBO1Q9Y6N7 1651 aa16.05■□□□□ 0.16
TPM3-202ENST00000302206 SMG6Q86US8 1419 aaKnown RBP16.05■□□□□ 0.16
TPM3-202ENST00000302206 PTPRUQ92729 1446 aa16.05■□□□□ 0.16
TPM3-202ENST00000302206 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
TPM3-202ENST00000302206 WDR43Q15061 677 aaKnown RBP eCLIP16.03■□□□□ 0.16
TPM3-202ENST00000302206 PDE3BQ13370 1112 aa16.02■□□□□ 0.16
TPM3-202ENST00000302206 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
TPM3-202ENST00000302206 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.02■□□□□ 0.15
TPM3-202ENST00000302206 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.15
TPM3-202ENST00000302206 CDC42BPGQ6DT37 1551 aa16.01■□□□□ 0.15
TPM3-202ENST00000302206 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
TPM3-202ENST00000302206 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
TPM3-202ENST00000302206 NEFLP07196 543 aa16■□□□□ 0.15
TPM3-202ENST00000302206 SLC26A8Q96RN1 970 aa16■□□□□ 0.15
TPM3-202ENST00000302206 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
TPM3-202ENST00000302206 AMOTL2Q9Y2J4 779 aa16■□□□□ 0.15
TPM3-202ENST00000302206 CCDC61Q9Y6R9 512 aa16■□□□□ 0.15
TPM3-202ENST00000302206 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
TPM3-202ENST00000302206 TMEM94Q12767 1356 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms