RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 POGKQ9P215 609 aa17.44■□□□□ 0.38
CTTN-201ENST00000301843 KIF1BO60333 1816 aa17.44■□□□□ 0.38
CTTN-201ENST00000301843 ABCA6Q8N139 1617 aa17.44■□□□□ 0.38
CTTN-201ENST00000301843 PIK3C2GO75747 1445 aa17.43■□□□□ 0.38
CTTN-201ENST00000301843 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
CTTN-201ENST00000301843 PPRC1Q5VV67 1664 aaKnown RBP17.43■□□□□ 0.38
CTTN-201ENST00000301843 IFT172Q9UG01 1749 aa17.42■□□□□ 0.38
CTTN-201ENST00000301843 KDM5AP29375 1690 aaKnown RBP17.42■□□□□ 0.38
CTTN-201ENST00000301843 LMTK2Q8IWU2 1503 aa17.42■□□□□ 0.38
CTTN-201ENST00000301843 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
CTTN-201ENST00000301843 MTHFSP49914 203 aa17.41■□□□□ 0.38
CTTN-201ENST00000301843 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
CTTN-201ENST00000301843 MROH2AA6NES4 1674 aa17.41■□□□□ 0.38
CTTN-201ENST00000301843 ERVK-7P63135 1459 aa17.41■□□□□ 0.38
CTTN-201ENST00000301843 TSR2Q969E8 191 aaKnown RBP17.4■□□□□ 0.38
CTTN-201ENST00000301843 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
CTTN-201ENST00000301843 RARSP54136 660 aaKnown RBP17.39■□□□□ 0.37
CTTN-201ENST00000301843 GGT6Q6P531 493 aa17.39■□□□□ 0.37
CTTN-201ENST00000301843 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
CTTN-201ENST00000301843 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
CTTN-201ENST00000301843 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
CTTN-201ENST00000301843 CGNL1Q0VF96 1302 aa17.38■□□□□ 0.37
CTTN-201ENST00000301843 SLC24A1O60721 1099 aa17.38■□□□□ 0.37
CTTN-201ENST00000301843 U2AF1L5P0DN76 240 aaPredicted RBP17.37■□□□□ 0.37
CTTN-201ENST00000301843 U2AF1Q01081 240 aaKnown RBP eCLIP17.37■□□□□ 0.371e-7■□□□□ 9.6
CTTN-201ENST00000301843 ADGRB3O60242 1522 aa17.36■□□□□ 0.37
CTTN-201ENST00000301843 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
CTTN-201ENST00000301843 MYO3AQ8NEV4 1616 aa17.35■□□□□ 0.37
CTTN-201ENST00000301843 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
CTTN-201ENST00000301843 CFAP74Q9C0B2 1584 aa17.35■□□□□ 0.37
CTTN-201ENST00000301843 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
CTTN-201ENST00000301843 POGZQ7Z3K3 1410 aa17.34■□□□□ 0.37
CTTN-201ENST00000301843 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
CTTN-201ENST00000301843 FRMPD1Q5SYB0 1578 aa17.34■□□□□ 0.37
CTTN-201ENST00000301843 NOS1P29475 1434 aa17.34■□□□□ 0.37
CTTN-201ENST00000301843 RUNDC1Q96C34 613 aa17.34■□□□□ 0.37
CTTN-201ENST00000301843 CABP2Q9NPB3 220 aa17.33■□□□□ 0.37
CTTN-201ENST00000301843 STK26Q9P289 416 aa17.33■□□□□ 0.37
CTTN-201ENST00000301843 CD109Q6YHK3 1445 aa17.33■□□□□ 0.36
CTTN-201ENST00000301843 MLH3Q9UHC1 1453 aa17.33■□□□□ 0.36
CTTN-201ENST00000301843 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
CTTN-201ENST00000301843 NPATQ14207 1427 aa17.32■□□□□ 0.36
CTTN-201ENST00000301843 SBNO2Q9Y2G9 1366 aa17.32■□□□□ 0.36
CTTN-201ENST00000301843 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
CTTN-201ENST00000301843 HECW2Q9P2P5 1572 aa17.3■□□□□ 0.36
CTTN-201ENST00000301843 FTSJ3Q8IY81 847 aaKnown RBP17.3■□□□□ 0.36
CTTN-201ENST00000301843 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
CTTN-201ENST00000301843 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
CTTN-201ENST00000301843 PPLO60437 1756 aa17.3■□□□□ 0.36
CTTN-201ENST00000301843 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
CTTN-201ENST00000301843 GGNBP2Q9H3C7 697 aa17.29■□□□□ 0.36
CTTN-201ENST00000301843 FBLN1P23142 703 aa17.29■□□□□ 0.36
CTTN-201ENST00000301843 BECN1Q14457 450 aa17.28■□□□□ 0.36
CTTN-201ENST00000301843 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
CTTN-201ENST00000301843 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.36
CTTN-201ENST00000301843 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.36
CTTN-201ENST00000301843 SMC4Q9NTJ3 1288 aa17.27■□□□□ 0.36
CTTN-201ENST00000301843 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.35
CTTN-201ENST00000301843 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.35
CTTN-201ENST00000301843 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
CTTN-201ENST00000301843 C14orf93Q9H972 538 aaKnown RBP17.26■□□□□ 0.35
CTTN-201ENST00000301843 ABCC3O15438 1527 aa17.26■□□□□ 0.35
CTTN-201ENST00000301843 ZC3H13Q5T200 1668 aaKnown RBP17.25■□□□□ 0.35
CTTN-201ENST00000301843 ADGRB1O14514 1584 aa17.25■□□□□ 0.35
CTTN-201ENST00000301843 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
CTTN-201ENST00000301843 QRICH2Q9H0J4 1663 aa17.24■□□□□ 0.35
CTTN-201ENST00000301843 TBC1D32Q96NH3 1257 aa17.23■□□□□ 0.35
CTTN-201ENST00000301843 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
CTTN-201ENST00000301843 RPGRIP1LQ68CZ1 1315 aa17.23■□□□□ 0.35
CTTN-201ENST00000301843 RWDD1Q9H446 243 aaPredicted RBP17.23■□□□□ 0.35
CTTN-201ENST00000301843 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
CTTN-201ENST00000301843 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
CTTN-201ENST00000301843 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
CTTN-201ENST00000301843 SRPK2P78362 688 aaKnown RBP17.22■□□□□ 0.35
CTTN-201ENST00000301843 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
CTTN-201ENST00000301843 TRIM27P14373 513 aa17.22■□□□□ 0.35
CTTN-201ENST00000301843 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
CTTN-201ENST00000301843 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
CTTN-201ENST00000301843 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
CTTN-201ENST00000301843 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
CTTN-201ENST00000301843 NEO1Q92859 1461 aa17.2■□□□□ 0.34
CTTN-201ENST00000301843 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
CTTN-201ENST00000301843 WDR63Q8IWG1 891 aa17.2■□□□□ 0.34
CTTN-201ENST00000301843 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
CTTN-201ENST00000301843 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
CTTN-201ENST00000301843 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
CTTN-201ENST00000301843 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
CTTN-201ENST00000301843 PIK3C2BO00750 1634 aa17.19■□□□□ 0.34
CTTN-201ENST00000301843 ELL2O00472 640 aaPredicted RBP17.18■□□□□ 0.34
CTTN-201ENST00000301843 RAPGEF3O95398 923 aa17.18■□□□□ 0.34
CTTN-201ENST00000301843 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
CTTN-201ENST00000301843 C1orf115Q9H7X2 142 aa17.18■□□□□ 0.34
CTTN-201ENST00000301843 C22orf23Q9BZE7 217 aa17.18■□□□□ 0.34
CTTN-201ENST00000301843 TMEM57Q8N5G2 664 aa17.18■□□□□ 0.34
CTTN-201ENST00000301843 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
CTTN-201ENST00000301843 DIP2CQ9Y2E4 1556 aa17.17■□□□□ 0.34
CTTN-201ENST00000301843 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
CTTN-201ENST00000301843 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
CTTN-201ENST00000301843 RRAGDQ9NQL2 400 aaPredicted RBP17.16■□□□□ 0.34
CTTN-201ENST00000301843 GLI2P10070 1586 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms