RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 PER1O15534 1290 aaPredicted RBP25.38■■□□□ 1.65
SEC61A2-201ENST00000298428 PTPRUQ92729 1446 aa25.37■■□□□ 1.65
SEC61A2-201ENST00000298428 CNGB1Q14028 1251 aaPredicted RBP25.34■■□□□ 1.65
SEC61A2-201ENST00000298428 ROBO2Q9HCK4 1378 aa25.34■■□□□ 1.65
SEC61A2-201ENST00000298428 CABP2Q9NPB3 220 aa25.34■■□□□ 1.65
SEC61A2-201ENST00000298428 SRPK2P78362 688 aaKnown RBP25.33■■□□□ 1.65
SEC61A2-201ENST00000298428 PIK3R4Q99570 1358 aa25.32■■□□□ 1.64
SEC61A2-201ENST00000298428 AMOTL2Q9Y2J4 779 aa25.32■■□□□ 1.64
SEC61A2-201ENST00000298428 TMC1Q8TDI8 760 aa25.31■■□□□ 1.64
SEC61A2-201ENST00000298428 NPHP4O75161 1426 aaPredicted RBP25.3■■□□□ 1.64
SEC61A2-201ENST00000298428 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
SEC61A2-201ENST00000298428 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
SEC61A2-201ENST00000298428 ATAD2Q6PL18 1390 aa25.29■■□□□ 1.64
SEC61A2-201ENST00000298428 KTN1Q86UP2 1357 aaKnown RBP25.29■■□□□ 1.64
SEC61A2-201ENST00000298428 YTHDC1Q96MU7 727 aaKnown RBP25.29■■□□□ 1.64
SEC61A2-201ENST00000298428 CDK19Q9BWU1 502 aa25.29■■□□□ 1.64
SEC61A2-201ENST00000298428 XRN1Q8IZH2 1706 aaKnown RBP25.29■■□□□ 1.64
SEC61A2-201ENST00000298428 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
SEC61A2-201ENST00000298428 NCKAP5LQ9HCH0 1330 aa25.26■■□□□ 1.63
SEC61A2-201ENST00000298428 RALBP1Q15311 655 aa25.26■■□□□ 1.63
SEC61A2-201ENST00000298428 NINLQ9Y2I6 1382 aa25.26■■□□□ 1.63
SEC61A2-201ENST00000298428 WASLO00401 505 aaPredicted RBP25.23■■□□□ 1.63
SEC61A2-201ENST00000298428 CC2D1BQ5T0F9 858 aaKnown RBP25.23■■□□□ 1.63
SEC61A2-201ENST00000298428 PARD3Q8TEW0 1356 aa25.23■■□□□ 1.63
SEC61A2-201ENST00000298428 ADGRB2O60241 1585 aa25.22■■□□□ 1.63
SEC61A2-201ENST00000298428 CARD14Q9BXL6 1004 aa25.22■■□□□ 1.63
SEC61A2-201ENST00000298428 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.22■■□□□ 1.63
SEC61A2-201ENST00000298428 KCNA6P17658 529 aa25.21■■□□□ 1.63
SEC61A2-201ENST00000298428 AMER1Q5JTC6 1135 aaPredicted RBP25.21■■□□□ 1.63
SEC61A2-201ENST00000298428 CHD2O14647 1828 aaKnown RBP25.21■■□□□ 1.63
SEC61A2-201ENST00000298428 ANKRD36BQ8N2N9 1353 aa25.21■■□□□ 1.63
SEC61A2-201ENST00000298428 MYBBP1AQ9BQG0 1328 aaKnown RBP25.19■■□□□ 1.62
SEC61A2-201ENST00000298428 NPC1L1Q9UHC9 1359 aa25.19■■□□□ 1.62
SEC61A2-201ENST00000298428 NSD3Q9BZ95 1437 aa25.19■■□□□ 1.62
SEC61A2-201ENST00000298428 CCDC184Q52MB2 194 aa25.19■■□□□ 1.62
SEC61A2-201ENST00000298428 MRS2Q9HD23 443 aa25.18■■□□□ 1.62
SEC61A2-201ENST00000298428 LMTK3Q96Q04 1460 aa25.18■■□□□ 1.62
SEC61A2-201ENST00000298428 HSPA2P54652 639 aa25.17■■□□□ 1.62
SEC61A2-201ENST00000298428 A0A1W2PP64 1363 aa25.15■■□□□ 1.62
SEC61A2-201ENST00000298428 TERF2IPQ9NYB0 399 aa25.14■■□□□ 1.61
SEC61A2-201ENST00000298428 CABP1Q9NZU7 370 aa25.14■■□□□ 1.61
SEC61A2-201ENST00000298428 USP32Q8NFA0 1604 aa25.13■■□□□ 1.61
SEC61A2-201ENST00000298428 CD163L1Q9NR16 1453 aa25.13■■□□□ 1.61
SEC61A2-201ENST00000298428 NUDT16Q96DE0 195 aaKnown RBP25.13■■□□□ 1.61
SEC61A2-201ENST00000298428 ATP7BP35670 1465 aa25.12■■□□□ 1.61
SEC61A2-201ENST00000298428 PPIP5K1Q6PFW1 1433 aa25.11■■□□□ 1.61
SEC61A2-201ENST00000298428 HDGFL2Q7Z4V5 671 aaPredicted RBP25.11■■□□□ 1.61
SEC61A2-201ENST00000298428 NLRP13Q86W25 1043 aa25.11■■□□□ 1.61
SEC61A2-201ENST00000298428 BRD4O60885 1362 aaPredicted RBP25.1■■□□□ 1.61
SEC61A2-201ENST00000298428 NWD1Q149M9 1564 aa25.1■■□□□ 1.61
SEC61A2-201ENST00000298428 CGNL1Q0VF96 1302 aa25.09■■□□□ 1.61
SEC61A2-201ENST00000298428 CCDC61Q9Y6R9 512 aa25.09■■□□□ 1.61
SEC61A2-201ENST00000298428 PRR36Q9H6K5 1346 aa25.08■■□□□ 1.61
SEC61A2-201ENST00000298428 CENPBP07199 599 aaPredicted RBP25.06■■□□□ 1.6
SEC61A2-201ENST00000298428 TOPAZ1Q8N9V7 1692 aa25.04■■□□□ 1.6
SEC61A2-201ENST00000298428 NSD2O96028 1365 aa25.04■■□□□ 1.6
SEC61A2-201ENST00000298428 CDC42BPGQ6DT37 1551 aa25.04■■□□□ 1.6
SEC61A2-201ENST00000298428 NALCNQ8IZF0 1738 aa25.03■■□□□ 1.6
SEC61A2-201ENST00000298428 NUTM2FA1L443 756 aa25.03■■□□□ 1.6
SEC61A2-201ENST00000298428 FAM9BQ8IZU0 186 aa25.03■■□□□ 1.6
SEC61A2-201ENST00000298428 CPSF1Q10570 1443 aaKnown RBP25.02■■□□□ 1.6
SEC61A2-201ENST00000298428 PPP2R1AP30153 589 aa25.02■■□□□ 1.6
SEC61A2-201ENST00000298428 STRCQ7RTU9 1775 aa25.01■■□□□ 1.59
SEC61A2-201ENST00000298428 NKTRP30414 1462 aaKnown RBP25.01■■□□□ 1.59
SEC61A2-201ENST00000298428 RBM33Q96EV2 1170 aaKnown RBP25■■□□□ 1.59
SEC61A2-201ENST00000298428 ADGRL3Q9HAR2 1447 aa25■■□□□ 1.59
SEC61A2-201ENST00000298428 MORC1Q86VD1 984 aa25■■□□□ 1.59
SEC61A2-201ENST00000298428 ITSN1Q15811 1721 aa24.99■■□□□ 1.59
SEC61A2-201ENST00000298428 FMN2Q9NZ56 1722 aa24.99■■□□□ 1.59
SEC61A2-201ENST00000298428 ANKARQ7Z5J8 1434 aa24.98■■□□□ 1.59
SEC61A2-201ENST00000298428 PNISRQ8TF01 805 aaKnown RBP24.98■■□□□ 1.59
SEC61A2-201ENST00000298428 PLEKHG3A1L390 1219 aa24.97■■□□□ 1.59
SEC61A2-201ENST00000298428 AKAP12Q02952 1782 aa24.97■■□□□ 1.59
SEC61A2-201ENST00000298428 MON2Q7Z3U7 1717 aa24.96■■□□□ 1.59
SEC61A2-201ENST00000298428 EDC4Q6P2E9 1401 aaKnown RBP24.96■■□□□ 1.59
SEC61A2-201ENST00000298428 PROSER2Q86WR7 435 aaPredicted RBP24.96■■□□□ 1.59
SEC61A2-201ENST00000298428 C14orf37Q86TY3 774 aa24.95■■□□□ 1.58
SEC61A2-201ENST00000298428 ZNF692Q9BU19 519 aaPredicted RBP24.95■■□□□ 1.58
SEC61A2-201ENST00000298428 FYB1O15117 783 aa24.94■■□□□ 1.58
SEC61A2-201ENST00000298428 KIF20BQ96Q89 1820 aa24.94■■□□□ 1.58
SEC61A2-201ENST00000298428 GGNBP2Q9H3C7 697 aa24.94■■□□□ 1.58
SEC61A2-201ENST00000298428 STRCP1A6NGW2 1772 aa24.93■■□□□ 1.58
SEC61A2-201ENST00000298428 RGPD8O14715 1765 aaPredicted RBP24.93■■□□□ 1.58
SEC61A2-201ENST00000298428 ACEP12821 1306 aa24.93■■□□□ 1.58
SEC61A2-201ENST00000298428 ANKRD26Q9UPS8 1709 aa24.93■■□□□ 1.58
SEC61A2-201ENST00000298428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.93■■□□□ 1.58
SEC61A2-201ENST00000298428 TNNT2P45379 298 aaPredicted RBP24.91■■□□□ 1.58
SEC61A2-201ENST00000298428 HNRNPUQ00839 825 aaKnown RBP eCLIP24.9■■□□□ 1.58
SEC61A2-201ENST00000298428 PMFBP1Q8TBY8 1022 aa24.89■■□□□ 1.57
SEC61A2-201ENST00000298428 POLR3AO14802 1390 aaPredicted RBP24.88■■□□□ 1.57
SEC61A2-201ENST00000298428 USP6P35125 1406 aa24.88■■□□□ 1.57
SEC61A2-201ENST00000298428 NRKQ7Z2Y5 1582 aa24.88■■□□□ 1.57
SEC61A2-201ENST00000298428 TMEM94Q12767 1356 aa24.86■■□□□ 1.57
SEC61A2-201ENST00000298428 NGDNQ8NEJ9 315 aaKnown RBP24.86■■□□□ 1.57
SEC61A2-201ENST00000298428 NCOA3Q9Y6Q9 1424 aa24.85■■□□□ 1.57
SEC61A2-201ENST00000298428 NME9Q86XW9 330 aa24.84■■□□□ 1.57
SEC61A2-201ENST00000298428 C19orf44Q9H6X5 657 aa24.84■■□□□ 1.57
SEC61A2-201ENST00000298428 TTC21BQ7Z4L5 1316 aa24.83■■□□□ 1.57
SEC61A2-201ENST00000298428 SSH2Q76I76 1423 aa24.81■■□□□ 1.56
SEC61A2-201ENST00000298428 PHF8Q9UPP1 1060 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms