RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 NAIPQ13075 1403 aa19.58■□□□□ 0.72
ARHGEF28-201ENST00000296794 FAM43AQ8N2R8 423 aa19.58■□□□□ 0.72
ARHGEF28-201ENST00000296794 CDC45O75419 566 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 RUFY2Q8WXA3 655 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 SCAPERQ9BY12 1400 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 SLC52A1Q9NWF4 448 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 GOLGA6L19H0YKK7 550 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 TRAK2O60296 914 aa19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 FKBP5Q13451 457 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 ZKSCAN1P17029 563 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 PLEKHH2Q8IVE3 1493 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 IL27Q8NEV9 243 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 RAPGEF3O95398 923 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 BECN2A8MW95 431 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 NUTM2GQ5VZR2 741 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 C9orf84Q5VXU9 1444 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 EXOSC9Q06265 439 aaKnown RBP19.54■□□□□ 0.72
ARHGEF28-201ENST00000296794 ESCO1Q5FWF5 840 aa19.54■□□□□ 0.72
ARHGEF28-201ENST00000296794 DAPK1P53355 1430 aa19.53■□□□□ 0.72
ARHGEF28-201ENST00000296794 LRRFIP1Q32MZ4 808 aaKnown RBP19.53■□□□□ 0.72
ARHGEF28-201ENST00000296794 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.53■□□□□ 0.72
ARHGEF28-201ENST00000296794 FAM13BQ9NYF5 915 aa19.52■□□□□ 0.72
ARHGEF28-201ENST00000296794 ABTB2Q8N961 1025 aa19.52■□□□□ 0.72
ARHGEF28-201ENST00000296794 IFIT2P09913 472 aaKnown RBP19.51■□□□□ 0.71
ARHGEF28-201ENST00000296794 NASPP49321 788 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF28-201ENST00000296794 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF28-201ENST00000296794 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
ARHGEF28-201ENST00000296794 C11orf95C9JLR9 678 aaPredicted RBP19.5■□□□□ 0.71
ARHGEF28-201ENST00000296794 ANKLE2Q86XL3 938 aa19.5■□□□□ 0.71
ARHGEF28-201ENST00000296794 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
ARHGEF28-201ENST00000296794 ERBINQ96RT1 1412 aa19.49■□□□□ 0.71
ARHGEF28-201ENST00000296794 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
ARHGEF28-201ENST00000296794 VPS37CA5D8V6 355 aaPredicted RBP19.49■□□□□ 0.71
ARHGEF28-201ENST00000296794 TSR2Q969E8 191 aaKnown RBP19.49■□□□□ 0.71
ARHGEF28-201ENST00000296794 CREBRFQ8IUR6 639 aa19.48■□□□□ 0.71
ARHGEF28-201ENST00000296794 CHMP4CQ96CF2 233 aa19.48■□□□□ 0.71
ARHGEF28-201ENST00000296794 RASSF8Q8NHQ8 419 aa19.48■□□□□ 0.71
ARHGEF28-201ENST00000296794 NOL10Q9BSC4 688 aaKnown RBP19.48■□□□□ 0.71
ARHGEF28-201ENST00000296794 PRAM1Q96QH2 718 aa19.47■□□□□ 0.71
ARHGEF28-201ENST00000296794 SUPT6HQ7KZ85 1726 aaKnown RBP19.47■□□□□ 0.71
ARHGEF28-201ENST00000296794 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
ARHGEF28-201ENST00000296794 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
ARHGEF28-201ENST00000296794 BICD2Q8TD16 824 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 NOB1Q9ULX3 412 aaKnown RBP19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 ZNF592Q92610 1267 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 NINLQ9Y2I6 1382 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 PRKAR2BP31323 418 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 TNNT3P45378 269 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF28-201ENST00000296794 VPS37DQ86XT2 251 aa19.45■□□□□ 0.7
ARHGEF28-201ENST00000296794 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
ARHGEF28-201ENST00000296794 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
ARHGEF28-201ENST00000296794 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
ARHGEF28-201ENST00000296794 GOLGA6L1Q8N7Z2 621 aa19.44■□□□□ 0.7
ARHGEF28-201ENST00000296794 AMOTL1Q8IY63 956 aa19.44■□□□□ 0.7
ARHGEF28-201ENST00000296794 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 MARCH6O60337 910 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 RNF214Q8ND24 703 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 GCC1Q96CN9 775 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 G3BP1Q13283 466 aaKnown RBP eCLIP19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 WDR63Q8IWG1 891 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 TPM3P06753 285 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 SLC26A8Q96RN1 970 aa19.42■□□□□ 0.7
ARHGEF28-201ENST00000296794 KIAA0586Q9BVV6 1533 aa19.42■□□□□ 0.7
ARHGEF28-201ENST00000296794 MVPQ14764 893 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 RABEP1Q15276 862 aa19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 ANKRD30BQ9BXX2 1392 aa19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 ERC2O15083 957 aa19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 ZNF692Q9BU19 519 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 R3HCC1Q9Y3T6 440 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 SLFN5Q08AF3 891 aa19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 RIC3Q7Z5B4 369 aa19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 UBTFL1P0CB47 393 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 TRIM34Q9BYJ4 488 aa19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 NEK4P51957 841 aa19.39■□□□□ 0.7
ARHGEF28-201ENST00000296794 CCDC39Q9UFE4 941 aa19.39■□□□□ 0.7
ARHGEF28-201ENST00000296794 DNMBPQ6XZF7 1577 aa19.39■□□□□ 0.7
ARHGEF28-201ENST00000296794 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 NOC3LQ8WTT2 800 aaKnown RBP19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 AKAP17AQ02040 695 aaKnown RBP19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 STRN4Q9NRL3 753 aa19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 CDK13Q14004 1512 aaKnown RBP19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 VPS53Q5VIR6 699 aa19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 CPLX2Q6PUV4 134 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 SYNE3Q6ZMZ3 975 aa19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 PRPF40AO75400 957 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 CT47B1P0C2W7 299 aaPredicted RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 CCAR2Q8N163 923 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 EPRSP07814 1512 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms