RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 NAIPQ13075 1403 aa19.58■□□□□ 0.72
ARHGEF28-201ENST00000296794 FAM43AQ8N2R8 423 aa19.58■□□□□ 0.72
ARHGEF28-201ENST00000296794 CDC45O75419 566 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 RUFY2Q8WXA3 655 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 SCAPERQ9BY12 1400 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 SLC52A1Q9NWF4 448 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 GOLGA6L19H0YKK7 550 aa19.57■□□□□ 0.72
ARHGEF28-201ENST00000296794 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 TRAK2O60296 914 aa19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 FKBP5Q13451 457 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 ZKSCAN1P17029 563 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF28-201ENST00000296794 PLEKHH2Q8IVE3 1493 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 IL27Q8NEV9 243 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 RAPGEF3O95398 923 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 BECN2A8MW95 431 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 NUTM2GQ5VZR2 741 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 C9orf84Q5VXU9 1444 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
ARHGEF28-201ENST00000296794 EXOSC9Q06265 439 aaKnown RBP19.54■□□□□ 0.72
ARHGEF28-201ENST00000296794 ESCO1Q5FWF5 840 aa19.54■□□□□ 0.72
ARHGEF28-201ENST00000296794 DAPK1P53355 1430 aa19.53■□□□□ 0.72
ARHGEF28-201ENST00000296794 LRRFIP1Q32MZ4 808 aaKnown RBP19.53■□□□□ 0.72
ARHGEF28-201ENST00000296794 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.53■□□□□ 0.72
ARHGEF28-201ENST00000296794 FAM13BQ9NYF5 915 aa19.52■□□□□ 0.72
ARHGEF28-201ENST00000296794 ABTB2Q8N961 1025 aa19.52■□□□□ 0.72
ARHGEF28-201ENST00000296794 IFIT2P09913 472 aaKnown RBP19.51■□□□□ 0.71
ARHGEF28-201ENST00000296794 NASPP49321 788 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF28-201ENST00000296794 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
ARHGEF28-201ENST00000296794 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
ARHGEF28-201ENST00000296794 C11orf95C9JLR9 678 aaPredicted RBP19.5■□□□□ 0.71
ARHGEF28-201ENST00000296794 ANKLE2Q86XL3 938 aa19.5■□□□□ 0.71
ARHGEF28-201ENST00000296794 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
ARHGEF28-201ENST00000296794 ERBINQ96RT1 1412 aa19.49■□□□□ 0.71
ARHGEF28-201ENST00000296794 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
ARHGEF28-201ENST00000296794 VPS37CA5D8V6 355 aaPredicted RBP19.49■□□□□ 0.71
ARHGEF28-201ENST00000296794 TSR2Q969E8 191 aaKnown RBP19.49■□□□□ 0.71
ARHGEF28-201ENST00000296794 CREBRFQ8IUR6 639 aa19.48■□□□□ 0.71
ARHGEF28-201ENST00000296794 CHMP4CQ96CF2 233 aa19.48■□□□□ 0.71
ARHGEF28-201ENST00000296794 RASSF8Q8NHQ8 419 aa19.48■□□□□ 0.71
ARHGEF28-201ENST00000296794 NOL10Q9BSC4 688 aaKnown RBP19.48■□□□□ 0.71
ARHGEF28-201ENST00000296794 PRAM1Q96QH2 718 aa19.47■□□□□ 0.71
ARHGEF28-201ENST00000296794 SUPT6HQ7KZ85 1726 aaKnown RBP19.47■□□□□ 0.71
ARHGEF28-201ENST00000296794 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
ARHGEF28-201ENST00000296794 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
ARHGEF28-201ENST00000296794 BICD2Q8TD16 824 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 NOB1Q9ULX3 412 aaKnown RBP19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 ZNF592Q92610 1267 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 NINLQ9Y2I6 1382 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 PRKAR2BP31323 418 aa19.46■□□□□ 0.71
ARHGEF28-201ENST00000296794 TNNT3P45378 269 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF28-201ENST00000296794 VPS37DQ86XT2 251 aa19.45■□□□□ 0.7
ARHGEF28-201ENST00000296794 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
ARHGEF28-201ENST00000296794 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
ARHGEF28-201ENST00000296794 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
ARHGEF28-201ENST00000296794 GOLGA6L1Q8N7Z2 621 aa19.44■□□□□ 0.7
ARHGEF28-201ENST00000296794 AMOTL1Q8IY63 956 aa19.44■□□□□ 0.7
ARHGEF28-201ENST00000296794 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 MARCH6O60337 910 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 RNF214Q8ND24 703 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 GCC1Q96CN9 775 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 G3BP1Q13283 466 aaKnown RBP eCLIP19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 WDR63Q8IWG1 891 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 TPM3P06753 285 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
ARHGEF28-201ENST00000296794 SLC26A8Q96RN1 970 aa19.42■□□□□ 0.7
ARHGEF28-201ENST00000296794 KIAA0586Q9BVV6 1533 aa19.42■□□□□ 0.7
ARHGEF28-201ENST00000296794 MVPQ14764 893 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 RABEP1Q15276 862 aa19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 ANKRD30BQ9BXX2 1392 aa19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 ERC2O15083 957 aa19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 ZNF692Q9BU19 519 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 R3HCC1Q9Y3T6 440 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-201ENST00000296794 SLFN5Q08AF3 891 aa19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 RIC3Q7Z5B4 369 aa19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 UBTFL1P0CB47 393 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 TRIM34Q9BYJ4 488 aa19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF28-201ENST00000296794 NEK4P51957 841 aa19.39■□□□□ 0.7
ARHGEF28-201ENST00000296794 CCDC39Q9UFE4 941 aa19.39■□□□□ 0.7
ARHGEF28-201ENST00000296794 DNMBPQ6XZF7 1577 aa19.39■□□□□ 0.7
ARHGEF28-201ENST00000296794 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 NOC3LQ8WTT2 800 aaKnown RBP19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 AKAP17AQ02040 695 aaKnown RBP19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 STRN4Q9NRL3 753 aa19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 CDK13Q14004 1512 aaKnown RBP19.39■□□□□ 0.69
ARHGEF28-201ENST00000296794 VPS53Q5VIR6 699 aa19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 CPLX2Q6PUV4 134 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 SYNE3Q6ZMZ3 975 aa19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 PRPF40AO75400 957 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 CT47B1P0C2W7 299 aaPredicted RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 CCAR2Q8N163 923 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 EPRSP07814 1512 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms