RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 U2SURPO15042 1029 aaKnown RBP12.26□□□□□ -0.45
PRDM9-201ENST00000296682 KIF13AQ9H1H9 1805 aa12.26□□□□□ -0.45
PRDM9-201ENST00000296682 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
PRDM9-201ENST00000296682 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
PRDM9-201ENST00000296682 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
PRDM9-201ENST00000296682 FRAT1Q92837 279 aaPredicted RBP12.25□□□□□ -0.45
PRDM9-201ENST00000296682 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
PRDM9-201ENST00000296682 PUS7Q96PZ0 661 aaKnown RBP12.25□□□□□ -0.45
PRDM9-201ENST00000296682 SOX12O15370 315 aa12.24□□□□□ -0.45
PRDM9-201ENST00000296682 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
PRDM9-201ENST00000296682 CENPJQ9HC77 1338 aaPredicted RBP12.23□□□□□ -0.45
PRDM9-201ENST00000296682 SPATA31D1Q6ZQQ2 1576 aa12.23□□□□□ -0.45
PRDM9-201ENST00000296682 IDI1Q13907 227 aa12.23□□□□□ -0.45
PRDM9-201ENST00000296682 RPGRIP1LQ68CZ1 1315 aa12.22□□□□□ -0.45
PRDM9-201ENST00000296682 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
PRDM9-201ENST00000296682 NBR1Q14596 966 aa12.22□□□□□ -0.45
PRDM9-201ENST00000296682 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRDM9-201ENST00000296682 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
PRDM9-201ENST00000296682 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.45
PRDM9-201ENST00000296682 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.45
PRDM9-201ENST00000296682 EIF3AQ14152 1382 aaKnown RBP12.21□□□□□ -0.45
PRDM9-201ENST00000296682 RGS3P49796 1198 aa12.21□□□□□ -0.46
PRDM9-201ENST00000296682 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.46
PRDM9-201ENST00000296682 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
PRDM9-201ENST00000296682 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
PRDM9-201ENST00000296682 PDE3BQ13370 1112 aa12.2□□□□□ -0.46
PRDM9-201ENST00000296682 ZNF521Q96K83 1311 aa12.2□□□□□ -0.46
PRDM9-201ENST00000296682 DLC1Q96QB1 1528 aa12.19□□□□□ -0.46
PRDM9-201ENST00000296682 ADGRB2O60241 1585 aa12.19□□□□□ -0.46
PRDM9-201ENST00000296682 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
PRDM9-201ENST00000296682 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
PRDM9-201ENST00000296682 TULP4Q9NRJ4 1543 aa12.19□□□□□ -0.46
PRDM9-201ENST00000296682 LAS1LQ9Y4W2 734 aaKnown RBP12.19□□□□□ -0.46
PRDM9-201ENST00000296682 NRXN3Q9Y4C0 1643 aa12.18□□□□□ -0.46
PRDM9-201ENST00000296682 MED14O60244 1454 aa12.18□□□□□ -0.46
PRDM9-201ENST00000296682 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
PRDM9-201ENST00000296682 FBLN1P23142 703 aa12.18□□□□□ -0.46
PRDM9-201ENST00000296682 C20orf194Q5TEA3 1177 aa12.18□□□□□ -0.46
PRDM9-201ENST00000296682 CLUAP1Q96AJ1 413 aa12.18□□□□□ -0.46
PRDM9-201ENST00000296682 CARD14Q9BXL6 1004 aa12.18□□□□□ -0.46
PRDM9-201ENST00000296682 MTHFSP49914 203 aa12.17□□□□□ -0.46
PRDM9-201ENST00000296682 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
PRDM9-201ENST00000296682 IQSEC2Q5JU85 1478 aa12.17□□□□□ -0.46
PRDM9-201ENST00000296682 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
PRDM9-201ENST00000296682 CDC42BPGQ6DT37 1551 aa12.16□□□□□ -0.46
PRDM9-201ENST00000296682 ANP32AP39687 249 aaKnown RBP12.16□□□□□ -0.46
PRDM9-201ENST00000296682 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
PRDM9-201ENST00000296682 VIRMAQ69YN4 1812 aaKnown RBP12.16□□□□□ -0.46
PRDM9-201ENST00000296682 CFAP53Q96M91 514 aa12.16□□□□□ -0.46
PRDM9-201ENST00000296682 ANP32EQ9BTT0 268 aa12.16□□□□□ -0.46
PRDM9-201ENST00000296682 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
PRDM9-201ENST00000296682 PTPRMP28827 1452 aa12.15□□□□□ -0.46
PRDM9-201ENST00000296682 WAPLQ7Z5K2 1190 aa12.15□□□□□ -0.47
PRDM9-201ENST00000296682 BCAR3O75815 825 aa12.14□□□□□ -0.47
PRDM9-201ENST00000296682 C14orf93Q9H972 538 aaKnown RBP12.14□□□□□ -0.47
PRDM9-201ENST00000296682 TRMT2AQ8IZ69 625 aaKnown RBP12.14□□□□□ -0.47
PRDM9-201ENST00000296682 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.13□□□□□ -0.47
PRDM9-201ENST00000296682 EVC2Q86UK5 1308 aa12.13□□□□□ -0.47
PRDM9-201ENST00000296682 FANCIQ9NVI1 1328 aa12.13□□□□□ -0.47
PRDM9-201ENST00000296682 DAXXQ9UER7 740 aaPredicted RBP12.12□□□□□ -0.47
PRDM9-201ENST00000296682 NLRP1Q9C000 1473 aa12.11□□□□□ -0.47
PRDM9-201ENST00000296682 POLR3AO14802 1390 aaPredicted RBP12.11□□□□□ -0.47
PRDM9-201ENST00000296682 PPP6R1Q9UPN7 881 aa12.11□□□□□ -0.47
PRDM9-201ENST00000296682 RIMS1Q86UR5 1692 aaKnown RBP12.11□□□□□ -0.47
PRDM9-201ENST00000296682 MSH5O43196 834 aa12.11□□□□□ -0.47
PRDM9-201ENST00000296682 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
PRDM9-201ENST00000296682 AKAP12Q02952 1782 aa12.11□□□□□ -0.47
PRDM9-201ENST00000296682 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
PRDM9-201ENST00000296682 NEFMP07197 916 aa12.1□□□□□ -0.47
PRDM9-201ENST00000296682 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
PRDM9-201ENST00000296682 NINLQ9Y2I6 1382 aa12.1□□□□□ -0.47
PRDM9-201ENST00000296682 ALKQ9UM73 1620 aa12.1□□□□□ -0.47
PRDM9-201ENST00000296682 MON2Q7Z3U7 1717 aa12.1□□□□□ -0.47
PRDM9-201ENST00000296682 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
PRDM9-201ENST00000296682 TCP11L2Q8N4U5 519 aa12.09□□□□□ -0.47
PRDM9-201ENST00000296682 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
PRDM9-201ENST00000296682 COG6Q9Y2V7 657 aa12.09□□□□□ -0.47
PRDM9-201ENST00000296682 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
PRDM9-201ENST00000296682 COL3A1P02461 1466 aaPredicted RBP12.09□□□□□ -0.47
PRDM9-201ENST00000296682 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
PRDM9-201ENST00000296682 TOPAZ1Q8N9V7 1692 aa12.09□□□□□ -0.47
PRDM9-201ENST00000296682 CD163L1Q9NR16 1453 aa12.09□□□□□ -0.47
PRDM9-201ENST00000296682 ELL2O00472 640 aaPredicted RBP12.09□□□□□ -0.47
PRDM9-201ENST00000296682 TCERG1O14776 1098 aaKnown RBP12.09□□□□□ -0.47
PRDM9-201ENST00000296682 NSD3Q9BZ95 1437 aa12.08□□□□□ -0.47
PRDM9-201ENST00000296682 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
PRDM9-201ENST00000296682 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
PRDM9-201ENST00000296682 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
PRDM9-201ENST00000296682 PANK1Q8TE04 598 aa12.08□□□□□ -0.48
PRDM9-201ENST00000296682 USP54Q70EL1 1684 aa12.08□□□□□ -0.48
PRDM9-201ENST00000296682 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
PRDM9-201ENST00000296682 NGEFQ8N5V2 710 aa12.08□□□□□ -0.48
PRDM9-201ENST00000296682 NSD2O96028 1365 aa12.08□□□□□ -0.48
PRDM9-201ENST00000296682 HMOX1P09601 288 aa12.07□□□□□ -0.48
PRDM9-201ENST00000296682 HDGFL2Q7Z4V5 671 aaPredicted RBP12.07□□□□□ -0.48
PRDM9-201ENST00000296682 CDK19Q9BWU1 502 aa12.07□□□□□ -0.48
PRDM9-201ENST00000296682 NRKQ7Z2Y5 1582 aa12.07□□□□□ -0.48
PRDM9-201ENST00000296682 UBR1Q8IWV7 1749 aa12.07□□□□□ -0.48
PRDM9-201ENST00000296682 PLEKHH1Q9ULM0 1364 aa12.06□□□□□ -0.48
PRDM9-201ENST00000296682 PHF23Q9BUL5 403 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms