RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 POGKQ9P215 609 aa24.9■■□□□ 1.58
CCDC78-201ENST00000293889 PLEKHH1Q9ULM0 1364 aa24.88■■□□□ 1.57
CCDC78-201ENST00000293889 SAFB2Q14151 953 aaKnown RBP eCLIP24.88■■□□□ 1.57
CCDC78-201ENST00000293889 FAM135BQ49AJ0 1406 aa24.88■■□□□ 1.57
CCDC78-201ENST00000293889 NALCNQ8IZF0 1738 aa24.87■■□□□ 1.57
CCDC78-201ENST00000293889 QRICH2Q9H0J4 1663 aa24.86■■□□□ 1.57
CCDC78-201ENST00000293889 C11orf95C9JLR9 678 aaPredicted RBP24.86■■□□□ 1.57
CCDC78-201ENST00000293889 NCOA3Q9Y6Q9 1424 aa24.84■■□□□ 1.57
CCDC78-201ENST00000293889 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.84■■□□□ 1.57
CCDC78-201ENST00000293889 SBNO2Q9Y2G9 1366 aa24.84■■□□□ 1.57
CCDC78-201ENST00000293889 TMF1P82094 1093 aa24.81■■□□□ 1.56
CCDC78-201ENST00000293889 MINK1Q8N4C8 1332 aaPredicted RBP24.81■■□□□ 1.56
CCDC78-201ENST00000293889 DISP3Q9P2K9 1392 aa24.81■■□□□ 1.56
CCDC78-201ENST00000293889 ADGRL3Q9HAR2 1447 aa24.8■■□□□ 1.56
CCDC78-201ENST00000293889 MSH6P52701 1360 aa24.8■■□□□ 1.56
CCDC78-201ENST00000293889 SLC24A1O60721 1099 aa24.79■■□□□ 1.56
CCDC78-201ENST00000293889 C14orf37Q86TY3 774 aa24.79■■□□□ 1.56
CCDC78-201ENST00000293889 WASHC2AQ641Q2 1341 aa24.79■■□□□ 1.56
CCDC78-201ENST00000293889 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
CCDC78-201ENST00000293889 CCDC7Q96M83 1385 aa24.77■■□□□ 1.56
CCDC78-201ENST00000293889 C19orf44Q9H6X5 657 aa24.76■■□□□ 1.55
CCDC78-201ENST00000293889 UBAP1LF5GYI3 381 aa24.75■■□□□ 1.55
CCDC78-201ENST00000293889 TULP4Q9NRJ4 1543 aa24.74■■□□□ 1.55
CCDC78-201ENST00000293889 EVC2Q86UK5 1308 aa24.73■■□□□ 1.55
CCDC78-201ENST00000293889 DCCP43146 1447 aa24.73■■□□□ 1.55
CCDC78-201ENST00000293889 CDCA8Q53HL2 280 aa24.72■■□□□ 1.55
CCDC78-201ENST00000293889 POLR3GLQ9BT43 218 aa24.72■■□□□ 1.55
CCDC78-201ENST00000293889 CDC42BPGQ6DT37 1551 aa24.71■■□□□ 1.55
CCDC78-201ENST00000293889 TOM1O60784 492 aa24.71■■□□□ 1.55
CCDC78-201ENST00000293889 FBXO41Q8TF61 875 aa24.71■■□□□ 1.55
CCDC78-201ENST00000293889 CDK19Q9BWU1 502 aa24.7■■□□□ 1.54
CCDC78-201ENST00000293889 ADGRB2O60241 1585 aa24.69■■□□□ 1.54
CCDC78-201ENST00000293889 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
CCDC78-201ENST00000293889 ATF3P18847 181 aa24.68■■□□□ 1.54
CCDC78-201ENST00000293889 CADPS2Q86UW7 1296 aa24.68■■□□□ 1.54
CCDC78-201ENST00000293889 CABP2Q9NPB3 220 aa24.68■■□□□ 1.54
CCDC78-201ENST00000293889 SRPK2P78362 688 aaKnown RBP24.67■■□□□ 1.54
CCDC78-201ENST00000293889 FMN2Q9NZ56 1722 aa24.66■■□□□ 1.54
CCDC78-201ENST00000293889 DIEXFQ68CQ4 756 aaKnown RBP24.66■■□□□ 1.54
CCDC78-201ENST00000293889 MST1RQ04912 1400 aa24.66■■□□□ 1.54
CCDC78-201ENST00000293889 PIP4K2BP78356 416 aa24.65■■□□□ 1.54
CCDC78-201ENST00000293889 PUS7Q96PZ0 661 aaKnown RBP24.65■■□□□ 1.54
CCDC78-201ENST00000293889 SLAIN2Q9P270 581 aa24.65■■□□□ 1.54
CCDC78-201ENST00000293889 DDX10Q13206 875 aaKnown RBP24.64■■□□□ 1.53
CCDC78-201ENST00000293889 ROBO1Q9Y6N7 1651 aa24.64■■□□□ 1.53
CCDC78-201ENST00000293889 RGPD8O14715 1765 aaPredicted RBP24.62■■□□□ 1.53
CCDC78-201ENST00000293889 SCAF1Q9H7N4 1312 aaKnown RBP24.62■■□□□ 1.53
CCDC78-201ENST00000293889 C1orf167Q5SNV9 1468 aa24.59■■□□□ 1.53
CCDC78-201ENST00000293889 ATAD2Q6PL18 1390 aa24.58■■□□□ 1.53
CCDC78-201ENST00000293889 NUDT16Q96DE0 195 aaKnown RBP24.58■■□□□ 1.53
CCDC78-201ENST00000293889 USP32Q8NFA0 1604 aa24.58■■□□□ 1.53
CCDC78-201ENST00000293889 NUTM2FA1L443 756 aa24.57■■□□□ 1.52
CCDC78-201ENST00000293889 PRR36Q9H6K5 1346 aa24.57■■□□□ 1.52
CCDC78-201ENST00000293889 ILDR1Q86SU0 546 aaPredicted RBP24.57■■□□□ 1.52
CCDC78-201ENST00000293889 MYOM1P52179 1685 aa24.56■■□□□ 1.52
CCDC78-201ENST00000293889 TMC1Q8TDI8 760 aa24.56■■□□□ 1.52
CCDC78-201ENST00000293889 ATP7BP35670 1465 aa24.55■■□□□ 1.52
CCDC78-201ENST00000293889 SLC12A5Q9H2X9 1139 aa24.55■■□□□ 1.52
CCDC78-201ENST00000293889 BRINP3Q76B58 766 aa24.53■■□□□ 1.52
CCDC78-201ENST00000293889 ORAI2Q96SN7 254 aa24.53■■□□□ 1.52
CCDC78-201ENST00000293889 CCDC61Q9Y6R9 512 aa24.53■■□□□ 1.52
CCDC78-201ENST00000293889 CABP1Q9NZU7 370 aa24.52■■□□□ 1.52
CCDC78-201ENST00000293889 ANKARQ7Z5J8 1434 aa24.51■■□□□ 1.51
CCDC78-201ENST00000293889 NINLQ9Y2I6 1382 aa24.51■■□□□ 1.51
CCDC78-201ENST00000293889 PANK3Q9H999 370 aa24.5■■□□□ 1.51
CCDC78-201ENST00000293889 NHSL1Q5SYE7 1610 aa24.5■■□□□ 1.51
CCDC78-201ENST00000293889 PPIP5K1Q6PFW1 1433 aa24.49■■□□□ 1.51
CCDC78-201ENST00000293889 TOPAZ1Q8N9V7 1692 aa24.48■■□□□ 1.51
CCDC78-201ENST00000293889 PHLPP1O60346 1717 aa24.47■■□□□ 1.51
CCDC78-201ENST00000293889 ITSN1Q15811 1721 aa24.47■■□□□ 1.51
CCDC78-201ENST00000293889 ESCO1Q5FWF5 840 aa24.47■■□□□ 1.51
CCDC78-201ENST00000293889 AHDC1Q5TGY3 1603 aaPredicted RBP24.46■■□□□ 1.51
CCDC78-201ENST00000293889 KIF1AQ12756 1690 aa24.46■■□□□ 1.51
CCDC78-201ENST00000293889 HSPA1LP34931 641 aa24.46■■□□□ 1.51
CCDC78-201ENST00000293889 PLEKHG3A1L390 1219 aa24.45■■□□□ 1.5
CCDC78-201ENST00000293889 CD163L1Q9NR16 1453 aa24.44■■□□□ 1.5
CCDC78-201ENST00000293889 DDX17Q92841 729 aaKnown RBP24.44■■□□□ 1.5
CCDC78-201ENST00000293889 ANKRD36BQ8N2N9 1353 aa24.44■■□□□ 1.5
CCDC78-201ENST00000293889 TERF2IPQ9NYB0 399 aa24.43■■□□□ 1.5
CCDC78-201ENST00000293889 COL16A1Q07092 1604 aaPredicted RBP24.43■■□□□ 1.5
CCDC78-201ENST00000293889 CARD14Q9BXL6 1004 aa24.43■■□□□ 1.5
CCDC78-201ENST00000293889 PER1O15534 1290 aaPredicted RBP24.42■■□□□ 1.5
CCDC78-201ENST00000293889 PMFBP1Q8TBY8 1022 aa24.42■■□□□ 1.5
CCDC78-201ENST00000293889 A0A1W2PP64 1363 aa24.42■■□□□ 1.5
CCDC78-201ENST00000293889 ACEP12821 1306 aa24.4■■□□□ 1.5
CCDC78-201ENST00000293889 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
CCDC78-201ENST00000293889 PHF8Q9UPP1 1060 aa24.4■■□□□ 1.5
CCDC78-201ENST00000293889 CPSF1Q10570 1443 aaKnown RBP24.4■■□□□ 1.5
CCDC78-201ENST00000293889 FOXO3O43524 673 aa24.38■■□□□ 1.49
CCDC78-201ENST00000293889 POLR3AO14802 1390 aaPredicted RBP24.37■■□□□ 1.49
CCDC78-201ENST00000293889 NGDNQ8NEJ9 315 aaKnown RBP24.36■■□□□ 1.49
CCDC78-201ENST00000293889 KNSTRNQ9Y448 316 aa24.36■■□□□ 1.49
CCDC78-201ENST00000293889 PXDNQ92626 1479 aa24.36■■□□□ 1.49
CCDC78-201ENST00000293889 NSD3Q9BZ95 1437 aa24.36■■□□□ 1.49
CCDC78-201ENST00000293889 KTN1Q86UP2 1357 aaKnown RBP24.36■■□□□ 1.49
CCDC78-201ENST00000293889 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
CCDC78-201ENST00000293889 ZNF692Q9BU19 519 aaPredicted RBP24.35■■□□□ 1.49
CCDC78-201ENST00000293889 AKAP12Q02952 1782 aa24.34■■□□□ 1.49
CCDC78-201ENST00000293889 NPHP3Q7Z494 1330 aa24.34■■□□□ 1.49
CCDC78-201ENST00000293889 XPCQ01831 940 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms