RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ATF3P18847 181 aa38.5■■■■□ 3.75
SSU72-201ENST00000291386 PRAM1Q96QH2 718 aa38.48■■■■□ 3.75
SSU72-201ENST00000291386 SLAIN2Q9P270 581 aa38.47■■■■□ 3.75
SSU72-201ENST00000291386 GPRASP1Q5JY77 1395 aa38.46■■■■□ 3.75
SSU72-201ENST00000291386 CDC42BPGQ6DT37 1551 aa38.46■■■■□ 3.75
SSU72-201ENST00000291386 PIP4K2BP78356 416 aa38.46■■■■□ 3.75
SSU72-201ENST00000291386 RALGAPBQ86X10 1494 aa38.45■■■■□ 3.75
SSU72-201ENST00000291386 ROCK2O75116 1388 aaKnown RBP38.44■■■■□ 3.74
SSU72-201ENST00000291386 POGKQ9P215 609 aa38.43■■■■□ 3.74
SSU72-201ENST00000291386 MST1RQ04912 1400 aa38.41■■■■□ 3.74
SSU72-201ENST00000291386 SCAF1Q9H7N4 1312 aaKnown RBP38.38■■■■□ 3.74
SSU72-201ENST00000291386 ROBO1Q9Y6N7 1651 aa38.37■■■■□ 3.73
SSU72-201ENST00000291386 ADGRB2O60241 1585 aa38.37■■■■□ 3.73
SSU72-201ENST00000291386 SAFB2Q14151 953 aaKnown RBP eCLIP38.34■■■■□ 3.73
SSU72-201ENST00000291386 FMN2Q9NZ56 1722 aa38.32■■■■□ 3.72
SSU72-201ENST00000291386 C1orf167Q5SNV9 1468 aa38.31■■■■□ 3.72
SSU72-201ENST00000291386 CARD11Q9BXL7 1154 aa38.28■■■■□ 3.72
SSU72-201ENST00000291386 CENPJQ9HC77 1338 aaPredicted RBP38.26■■■■□ 3.72
SSU72-201ENST00000291386 EIF3AQ14152 1382 aaKnown RBP38.25■■■■□ 3.71
SSU72-201ENST00000291386 MINK1Q8N4C8 1332 aaPredicted RBP38.25■■■■□ 3.71
SSU72-201ENST00000291386 BRINP3Q76B58 766 aa38.24■■■■□ 3.71
SSU72-201ENST00000291386 QRICH2Q9H0J4 1663 aa38.21■■■■□ 3.71
SSU72-201ENST00000291386 HSPA1LP34931 641 aa38.21■■■■□ 3.71
SSU72-201ENST00000291386 HIRIP3Q9BW71 556 aaPredicted RBP38.2■■■■□ 3.71
SSU72-201ENST00000291386 WASLO00401 505 aaPredicted RBP38.19■■■■□ 3.7
SSU72-201ENST00000291386 AHDC1Q5TGY3 1603 aaPredicted RBP38.18■■■■□ 3.7
SSU72-201ENST00000291386 ANKARQ7Z5J8 1434 aa38.17■■■■□ 3.7
SSU72-201ENST00000291386 ORAI2Q96SN7 254 aa38.15■■■■□ 3.7
SSU72-201ENST00000291386 TULP4Q9NRJ4 1543 aa38.14■■■■□ 3.7
SSU72-201ENST00000291386 NHSL1Q5SYE7 1610 aa38.14■■■■□ 3.7
SSU72-201ENST00000291386 USP32Q8NFA0 1604 aa38.14■■■■□ 3.7
SSU72-201ENST00000291386 RGPD8O14715 1765 aaPredicted RBP38.13■■■■□ 3.69
SSU72-201ENST00000291386 PHLPP1O60346 1717 aa38.12■■■■□ 3.69
SSU72-201ENST00000291386 SBNO2Q9Y2G9 1366 aa38.11■■■■□ 3.69
SSU72-201ENST00000291386 NUTM2FA1L443 756 aa38.11■■■■□ 3.69
SSU72-201ENST00000291386 ESCO1Q5FWF5 840 aa38.1■■■■□ 3.69
SSU72-201ENST00000291386 KIF1AQ12756 1690 aa38.08■■■■□ 3.69
SSU72-201ENST00000291386 CDK19Q9BWU1 502 aa38.08■■■■□ 3.69
SSU72-201ENST00000291386 COL16A1Q07092 1604 aaPredicted RBP38.06■■■■□ 3.68
SSU72-201ENST00000291386 PRR36Q9H6K5 1346 aa38.05■■■■□ 3.68
SSU72-201ENST00000291386 ATP7BP35670 1465 aa38.03■■■■□ 3.68
SSU72-201ENST00000291386 USP47Q96K76 1375 aa38.01■■■■□ 3.68
SSU72-201ENST00000291386 ITSN1Q15811 1721 aa38.01■■■■□ 3.67
SSU72-201ENST00000291386 PHF8Q9UPP1 1060 aa38■■■■□ 3.67
SSU72-201ENST00000291386 EVC2Q86UK5 1308 aa38■■■■□ 3.67
SSU72-201ENST00000291386 NUDT16Q96DE0 195 aaKnown RBP37.99■■■■□ 3.67
SSU72-201ENST00000291386 NPHP3Q7Z494 1330 aa37.98■■■■□ 3.67
SSU72-201ENST00000291386 SOS2Q07890 1332 aaPredicted RBP37.97■■■■□ 3.67
SSU72-201ENST00000291386 ST20-MTHFSA0A0A6YYL1 179 aa37.97■■■■□ 3.67
SSU72-201ENST00000291386 TOPAZ1Q8N9V7 1692 aa37.97■■■■□ 3.67
SSU72-201ENST00000291386 DDX17Q92841 729 aaKnown RBP37.96■■■■□ 3.67
SSU72-201ENST00000291386 SLC24A1O60721 1099 aa37.94■■■■□ 3.66
SSU72-201ENST00000291386 SRPK2P78362 688 aaKnown RBP37.94■■■■□ 3.66
SSU72-201ENST00000291386 FOXO3O43524 673 aa37.93■■■■□ 3.66
SSU72-201ENST00000291386 TESK2Q96S53 571 aa37.93■■■■□ 3.66
SSU72-201ENST00000291386 CCDC61Q9Y6R9 512 aa37.93■■■■□ 3.66
SSU72-201ENST00000291386 PXDNQ92626 1479 aa37.92■■■■□ 3.66
SSU72-201ENST00000291386 CABP2Q9NPB3 220 aa37.91■■■■□ 3.66
SSU72-201ENST00000291386 LRRC59Q96AG4 307 aaKnown RBP37.9■■■■□ 3.66
SSU72-201ENST00000291386 JCADQ9P266 1359 aa37.9■■■■□ 3.66
SSU72-201ENST00000291386 PMFBP1Q8TBY8 1022 aa37.88■■■■□ 3.65
SSU72-201ENST00000291386 SHPRHQ149N8 1683 aa37.87■■■■□ 3.65
SSU72-201ENST00000291386 PLEKHG3A1L390 1219 aa37.86■■■■□ 3.65
SSU72-201ENST00000291386 PUS7Q96PZ0 661 aaKnown RBP37.85■■■■□ 3.65
SSU72-201ENST00000291386 ATAD2Q6PL18 1390 aa37.82■■■■□ 3.65
SSU72-201ENST00000291386 PPIP5K1Q6PFW1 1433 aa37.82■■■■□ 3.64
SSU72-201ENST00000291386 KRT28Q7Z3Y7 464 aa37.82■■■■□ 3.64
SSU72-201ENST00000291386 POLR3AO14802 1390 aaPredicted RBP37.81■■■■□ 3.64
SSU72-201ENST00000291386 EIF4G2P78344 907 aaKnown RBP eCLIP37.79■■■■□ 3.647e-12■□□□□ 9
SSU72-201ENST00000291386 PSME1Q06323 249 aa37.79■■■■□ 3.64
SSU72-201ENST00000291386 XPCQ01831 940 aaPredicted RBP37.78■■■■□ 3.64
SSU72-201ENST00000291386 NGDNQ8NEJ9 315 aaKnown RBP37.78■■■■□ 3.64
SSU72-201ENST00000291386 SBNO1A3KN83 1393 aa37.78■■■■□ 3.64
SSU72-201ENST00000291386 PNPLA6Q8IY17 1366 aa37.76■■■■□ 3.64
SSU72-201ENST00000291386 ACEP12821 1306 aa37.75■■■■□ 3.63
SSU72-201ENST00000291386 SPATA31A6Q5VVP1 1343 aa37.75■■■■□ 3.63
SSU72-201ENST00000291386 TRPM3Q9HCF6 1732 aaPredicted RBP37.75■■■■□ 3.63
SSU72-201ENST00000291386 TMF1P82094 1093 aa37.74■■■■□ 3.63
SSU72-201ENST00000291386 SPATA31A3Q5VYP0 1347 aa37.74■■■■□ 3.63
SSU72-201ENST00000291386 CABP1Q9NZU7 370 aa37.74■■■■□ 3.63
SSU72-201ENST00000291386 COL22A1Q8NFW1 1626 aaPredicted RBP37.72■■■■□ 3.63
SSU72-201ENST00000291386 HSPA5P11021 654 aaKnown RBP37.71■■■■□ 3.63
SSU72-201ENST00000291386 TNS3Q68CZ2 1445 aa37.7■■■■□ 3.63
SSU72-201ENST00000291386 DISP3Q9P2K9 1392 aa37.7■■■■□ 3.63
SSU72-201ENST00000291386 MED1Q15648 1581 aaPredicted RBP37.67■■■■□ 3.62
SSU72-201ENST00000291386 CDCA8Q53HL2 280 aa37.66■■■■□ 3.62
SSU72-201ENST00000291386 BRD4O60885 1362 aaPredicted RBP37.66■■■■□ 3.62
SSU72-201ENST00000291386 ALS2Q96Q42 1657 aa37.66■■■■□ 3.62
SSU72-201ENST00000291386 AKAP12Q02952 1782 aa37.64■■■■□ 3.62
SSU72-201ENST00000291386 ARHGEF10O15013 1369 aa37.63■■■■□ 3.61
SSU72-201ENST00000291386 NINLQ9Y2I6 1382 aa37.63■■■■□ 3.61
SSU72-201ENST00000291386 CPSF1Q10570 1443 aaKnown RBP37.62■■■■□ 3.61
SSU72-201ENST00000291386 ZNF692Q9BU19 519 aaPredicted RBP37.62■■■■□ 3.61
SSU72-201ENST00000291386 USP6P35125 1406 aa37.61■■■■□ 3.61
SSU72-201ENST00000291386 LRP6O75581 1613 aa37.6■■■■□ 3.61
SSU72-201ENST00000291386 CD163L1Q9NR16 1453 aa37.58■■■■□ 3.61
SSU72-201ENST00000291386 SSH2Q76I76 1423 aa37.57■■■■□ 3.6
SSU72-201ENST00000291386 TMC1Q8TDI8 760 aa37.56■■■■□ 3.6
SSU72-201ENST00000291386 SLC12A5Q9H2X9 1139 aa37.56■■■■□ 3.6
SSU72-201ENST00000291386 MON2Q7Z3U7 1717 aa37.55■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms