RNA–Protein interactions for RNA: ENST00000290294.4

PRAC1-201, Transcript of PRAC1 small nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAC1, Length 386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1-201ENST00000290294 ACIN1Q9UKV3 1341 aaKnown RBP11.84□□□□□ -0.51
PRAC1-201ENST00000290294 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
PRAC1-201ENST00000290294 ADAMTS2O95450 1211 aa11.83□□□□□ -0.52
PRAC1-201ENST00000290294 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
PRAC1-201ENST00000290294 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
PRAC1-201ENST00000290294 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
PRAC1-201ENST00000290294 USP21Q9UK80 565 aa11.83□□□□□ -0.52
PRAC1-201ENST00000290294 KIF1BO60333 1816 aa11.83□□□□□ -0.52
PRAC1-201ENST00000290294 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
PRAC1-201ENST00000290294 LRPPRCP42704 1394 aaKnown RBP11.82□□□□□ -0.52
PRAC1-201ENST00000290294 SOS2Q07890 1332 aaPredicted RBP11.82□□□□□ -0.52
PRAC1-201ENST00000290294 C1orf167Q5SNV9 1468 aa11.82□□□□□ -0.52
PRAC1-201ENST00000290294 SETD1AO15047 1707 aaKnown RBP11.81□□□□□ -0.52
PRAC1-201ENST00000290294 HFM1A2PYH4 1435 aa11.81□□□□□ -0.52
PRAC1-201ENST00000290294 DDX17Q92841 729 aaKnown RBP11.81□□□□□ -0.52
PRAC1-201ENST00000290294 NHSL1Q5SYE7 1610 aa11.81□□□□□ -0.52
PRAC1-201ENST00000290294 NPHP3Q7Z494 1330 aa11.81□□□□□ -0.52
PRAC1-201ENST00000290294 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
PRAC1-201ENST00000290294 NRXN3Q9Y4C0 1643 aa11.8□□□□□ -0.52
PRAC1-201ENST00000290294 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
PRAC1-201ENST00000290294 FNBP4Q8N3X1 1017 aaPredicted RBP11.8□□□□□ -0.52
PRAC1-201ENST00000290294 ORAI2Q96SN7 254 aa11.8□□□□□ -0.52
PRAC1-201ENST00000290294 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
PRAC1-201ENST00000290294 NEXMIFQ5QGS0 1516 aa11.79□□□□□ -0.52
PRAC1-201ENST00000290294 EVX2Q03828 476 aa11.78□□□□□ -0.52
PRAC1-201ENST00000290294 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
PRAC1-201ENST00000290294 NAIPQ13075 1403 aa11.77□□□□□ -0.52
PRAC1-201ENST00000290294 ROBO2Q9HCK4 1378 aa11.77□□□□□ -0.53
PRAC1-201ENST00000290294 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.53
PRAC1-201ENST00000290294 CLTCL1P53675 1640 aa11.76□□□□□ -0.53
PRAC1-201ENST00000290294 FOXO3O43524 673 aa11.75□□□□□ -0.53
PRAC1-201ENST00000290294 PSME1Q06323 249 aa11.75□□□□□ -0.53
PRAC1-201ENST00000290294 SIRT1Q96EB6 747 aa11.75□□□□□ -0.53
PRAC1-201ENST00000290294 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
PRAC1-201ENST00000290294 PRAG1Q86YV5 1406 aa11.75□□□□□ -0.53
PRAC1-201ENST00000290294 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
PRAC1-201ENST00000290294 STK26Q9P289 416 aa11.74□□□□□ -0.53
PRAC1-201ENST00000290294 RGS12O14924 1447 aa11.74□□□□□ -0.53
PRAC1-201ENST00000290294 LAMC1P11047 1609 aa11.73□□□□□ -0.53
PRAC1-201ENST00000290294 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
PRAC1-201ENST00000290294 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
PRAC1-201ENST00000290294 GJD4Q96KN9 370 aaPredicted RBP11.73□□□□□ -0.53
PRAC1-201ENST00000290294 CCDC144AA2RUR9 1427 aa11.72□□□□□ -0.53
PRAC1-201ENST00000290294 ABCC11Q96J66 1382 aa11.71□□□□□ -0.53
PRAC1-201ENST00000290294 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.53
PRAC1-201ENST00000290294 UNC5CLQ8IV45 518 aa11.71□□□□□ -0.53
PRAC1-201ENST00000290294 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.53
PRAC1-201ENST00000290294 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
PRAC1-201ENST00000290294 ATRNO75882 1429 aa11.7□□□□□ -0.54
PRAC1-201ENST00000290294 KRT28Q7Z3Y7 464 aa11.7□□□□□ -0.54
PRAC1-201ENST00000290294 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
PRAC1-201ENST00000290294 ADGRF5Q8IZF2 1346 aa11.69□□□□□ -0.54
PRAC1-201ENST00000290294 DHX57Q6P158 1386 aaKnown RBP11.68□□□□□ -0.54
PRAC1-201ENST00000290294 COL22A1Q8NFW1 1626 aaPredicted RBP11.68□□□□□ -0.54
PRAC1-201ENST00000290294 NUTM2FA1L443 756 aa11.68□□□□□ -0.54
PRAC1-201ENST00000290294 PPLO60437 1756 aa11.68□□□□□ -0.54
PRAC1-201ENST00000290294 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
PRAC1-201ENST00000290294 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
PRAC1-201ENST00000290294 XPCQ01831 940 aaPredicted RBP11.67□□□□□ -0.54
PRAC1-201ENST00000290294 TMEM132EQ6IEE7 984 aa11.67□□□□□ -0.54
PRAC1-201ENST00000290294 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
PRAC1-201ENST00000290294 BCL9LQ86UU0 1499 aa11.67□□□□□ -0.54
PRAC1-201ENST00000290294 TECPR2O15040 1411 aa11.67□□□□□ -0.54
PRAC1-201ENST00000290294 MYOM2P54296 1465 aa11.66□□□□□ -0.54
PRAC1-201ENST00000290294 C14orf93Q9H972 538 aaKnown RBP11.66□□□□□ -0.54
PRAC1-201ENST00000290294 POGKQ9P215 609 aa11.66□□□□□ -0.54
PRAC1-201ENST00000290294 PXDNQ92626 1479 aa11.65□□□□□ -0.54
PRAC1-201ENST00000290294 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
PRAC1-201ENST00000290294 STAC3Q96MF2 364 aa11.65□□□□□ -0.54
PRAC1-201ENST00000290294 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.54
PRAC1-201ENST00000290294 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
PRAC1-201ENST00000290294 VPS72Q15906 364 aa11.64□□□□□ -0.55
PRAC1-201ENST00000290294 ARHGEF10O15013 1369 aa11.64□□□□□ -0.55
PRAC1-201ENST00000290294 ONECUT3O60422 494 aaPredicted RBP11.63□□□□□ -0.55
PRAC1-201ENST00000290294 BLMP54132 1417 aaPredicted RBP11.62□□□□□ -0.55
PRAC1-201ENST00000290294 SPATA31E1Q6ZUB1 1445 aa11.62□□□□□ -0.55
PRAC1-201ENST00000290294 SEPT12Q8IYM1 358 aa11.62□□□□□ -0.55
PRAC1-201ENST00000290294 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
PRAC1-201ENST00000290294 SBNO1A3KN83 1393 aa11.62□□□□□ -0.55
PRAC1-201ENST00000290294 PIK3C2GO75747 1445 aa11.61□□□□□ -0.55
PRAC1-201ENST00000290294 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
PRAC1-201ENST00000290294 KIF1AQ12756 1690 aa11.61□□□□□ -0.55
PRAC1-201ENST00000290294 SLIT2O94813 1529 aa11.6□□□□□ -0.55
PRAC1-201ENST00000290294 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
PRAC1-201ENST00000290294 EIF3AQ14152 1382 aaKnown RBP11.6□□□□□ -0.55
PRAC1-201ENST00000290294 GPRASP1Q5JY77 1395 aa11.6□□□□□ -0.55
PRAC1-201ENST00000290294 A0A0G2JS52 829 aa11.6□□□□□ -0.55
PRAC1-201ENST00000290294 MYT1Q01538 1121 aa11.6□□□□□ -0.55
PRAC1-201ENST00000290294 CFAP70Q5T0N1 1121 aa11.6□□□□□ -0.55
PRAC1-201ENST00000290294 PRAM1Q96QH2 718 aa11.6□□□□□ -0.55
PRAC1-201ENST00000290294 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
PRAC1-201ENST00000290294 PLEKHH1Q9ULM0 1364 aa11.59□□□□□ -0.55
PRAC1-201ENST00000290294 BAG6P46379 1132 aa11.59□□□□□ -0.55
PRAC1-201ENST00000290294 KNDC1Q76NI1 1749 aa11.58□□□□□ -0.56
PRAC1-201ENST00000290294 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.58□□□□□ -0.56
PRAC1-201ENST00000290294 FAM83GA6ND36 823 aa11.58□□□□□ -0.56
PRAC1-201ENST00000290294 SAFB2Q14151 953 aaKnown RBP eCLIP11.58□□□□□ -0.56
PRAC1-201ENST00000290294 CABLES1Q8TDN4 633 aa11.58□□□□□ -0.56
PRAC1-201ENST00000290294 FMN2Q9NZ56 1722 aa11.57□□□□□ -0.56
PRAC1-201ENST00000290294 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms