RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 RRP1P56182 461 aaKnown RBP25.59■■□□□ 1.69
BRAF-201ENST00000288602 SRPK2P78362 688 aaKnown RBP25.58■■□□□ 1.69
BRAF-201ENST00000288602 ARHGEF40Q8TER5 1519 aa25.58■■□□□ 1.68
BRAF-201ENST00000288602 POGKQ9P215 609 aa25.57■■□□□ 1.68
BRAF-201ENST00000288602 YTHDC2Q9H6S0 1430 aaKnown RBP25.56■■□□□ 1.68
BRAF-201ENST00000288602 ESF1Q9H501 851 aaKnown RBP25.56■■□□□ 1.68
BRAF-201ENST00000288602 RBM19Q9Y4C8 960 aaKnown RBP25.55■■□□□ 1.68
BRAF-201ENST00000288602 ALKQ9UM73 1620 aa25.55■■□□□ 1.68
BRAF-201ENST00000288602 A2ML1A8K2U0 1454 aa25.55■■□□□ 1.68
BRAF-201ENST00000288602 PTPRMP28827 1452 aa25.55■■□□□ 1.68
BRAF-201ENST00000288602 SPATA31D1Q6ZQQ2 1576 aa25.54■■□□□ 1.68
BRAF-201ENST00000288602 APAF1O14727 1248 aa25.53■■□□□ 1.68
BRAF-201ENST00000288602 ZMYM3Q14202 1370 aa25.52■■□□□ 1.68
BRAF-201ENST00000288602 CCDC136Q96JN2 1154 aa25.52■■□□□ 1.68
BRAF-201ENST00000288602 CGNL1Q0VF96 1302 aa25.52■■□□□ 1.68
BRAF-201ENST00000288602 PLIN1O60240 522 aa25.52■■□□□ 1.68
BRAF-201ENST00000288602 ANKRD36BQ8N2N9 1353 aa25.51■■□□□ 1.67
BRAF-201ENST00000288602 RIMS2Q9UQ26 1411 aa25.5■■□□□ 1.67
BRAF-201ENST00000288602 EXOC6Q8TAG9 804 aa25.49■■□□□ 1.67
BRAF-201ENST00000288602 PUS7Q96PZ0 661 aaKnown RBP25.49■■□□□ 1.67
BRAF-201ENST00000288602 ZNF521Q96K83 1311 aa25.48■■□□□ 1.67
BRAF-201ENST00000288602 WAPLQ7Z5K2 1190 aa25.48■■□□□ 1.67
BRAF-201ENST00000288602 A0A1W2PP64 1363 aa25.47■■□□□ 1.67
BRAF-201ENST00000288602 POLR3AO14802 1390 aaPredicted RBP25.47■■□□□ 1.67
BRAF-201ENST00000288602 MTHFSP49914 203 aa25.46■■□□□ 1.67
BRAF-201ENST00000288602 DUSP27Q5VZP5 1158 aa25.46■■□□□ 1.67
BRAF-201ENST00000288602 GOLGA2Q08379 1002 aa25.45■■□□□ 1.67
BRAF-201ENST00000288602 CDK19Q9BWU1 502 aa25.44■■□□□ 1.66
BRAF-201ENST00000288602 SPINK5Q9NQ38 1064 aaPredicted RBP25.44■■□□□ 1.66
BRAF-201ENST00000288602 USP32Q8NFA0 1604 aa25.42■■□□□ 1.66
BRAF-201ENST00000288602 GGNBP2Q9H3C7 697 aa25.42■■□□□ 1.66
BRAF-201ENST00000288602 DMRT2Q9Y5R5 561 aa25.4■■□□□ 1.66
BRAF-201ENST00000288602 SHPRHQ149N8 1683 aa25.39■■□□□ 1.66
BRAF-201ENST00000288602 SLFN5Q08AF3 891 aa25.39■■□□□ 1.65
BRAF-201ENST00000288602 NEUROD2Q15784 382 aa25.39■■□□□ 1.65
BRAF-201ENST00000288602 CABP1Q9NZU7 370 aa25.39■■□□□ 1.65
BRAF-201ENST00000288602 ATAD2Q6PL18 1390 aa25.38■■□□□ 1.65
BRAF-201ENST00000288602 PLPPR3Q6T4P5 718 aa25.37■■□□□ 1.65
BRAF-201ENST00000288602 RRP7AQ9Y3A4 280 aaKnown RBP25.37■■□□□ 1.65
BRAF-201ENST00000288602 METP08581 1390 aa25.37■■□□□ 1.65
BRAF-201ENST00000288602 CD163L1Q9NR16 1453 aa25.36■■□□□ 1.65
BRAF-201ENST00000288602 SETD1AO15047 1707 aaKnown RBP25.36■■□□□ 1.65
BRAF-201ENST00000288602 CEBPAP49715 358 aaPredicted RBP25.36■■□□□ 1.65
BRAF-201ENST00000288602 TERF2IPQ9NYB0 399 aa25.36■■□□□ 1.65
BRAF-201ENST00000288602 TNRQ92752 1358 aa25.36■■□□□ 1.65
BRAF-201ENST00000288602 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
BRAF-201ENST00000288602 C20orf194Q5TEA3 1177 aa25.35■■□□□ 1.65
BRAF-201ENST00000288602 NINLQ9Y2I6 1382 aa25.35■■□□□ 1.65
BRAF-201ENST00000288602 TXNDC2Q86VQ3 553 aa25.35■■□□□ 1.65
BRAF-201ENST00000288602 NSD2O96028 1365 aa25.34■■□□□ 1.65
BRAF-201ENST00000288602 FYB1O15117 783 aa25.34■■□□□ 1.65
BRAF-201ENST00000288602 NRXN3Q9Y4C0 1643 aa25.34■■□□□ 1.65
BRAF-201ENST00000288602 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.33■■□□□ 1.65
BRAF-201ENST00000288602 CFAP53Q96M91 514 aa25.33■■□□□ 1.65
BRAF-201ENST00000288602 CRBNQ96SW2 442 aa25.32■■□□□ 1.64
BRAF-201ENST00000288602 TRMT2AQ8IZ69 625 aaKnown RBP25.31■■□□□ 1.64
BRAF-201ENST00000288602 HDGFL2Q7Z4V5 671 aaPredicted RBP25.3■■□□□ 1.64
BRAF-201ENST00000288602 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
BRAF-201ENST00000288602 TCP11L2Q8N4U5 519 aa25.29■■□□□ 1.64
BRAF-201ENST00000288602 RUNDC1Q96C34 613 aa25.29■■□□□ 1.64
BRAF-201ENST00000288602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.29■■□□□ 1.643e-7■■■■□ 19.4
BRAF-201ENST00000288602 U2AF1L5P0DN76 240 aaPredicted RBP25.28■■□□□ 1.64
BRAF-201ENST00000288602 U2AF1Q01081 240 aaKnown RBP eCLIP25.28■■□□□ 1.641e-8■■■□□ 14.9
BRAF-201ENST00000288602 DLC1Q96QB1 1528 aa25.28■■□□□ 1.64
BRAF-201ENST00000288602 E9PSI1 815 aa25.26■■□□□ 1.63
BRAF-201ENST00000288602 FBLN1P23142 703 aa25.26■■□□□ 1.63
BRAF-201ENST00000288602 NCKAP5LQ9HCH0 1330 aa25.26■■□□□ 1.63
BRAF-201ENST00000288602 TMEM2Q9UHN6 1383 aa25.25■■□□□ 1.63
BRAF-201ENST00000288602 NLRP1Q9C000 1473 aa25.25■■□□□ 1.63
BRAF-201ENST00000288602 HDGFP51858 240 aaKnown RBP25.24■■□□□ 1.63
BRAF-201ENST00000288602 UBR1Q8IWV7 1749 aa25.24■■□□□ 1.63
BRAF-201ENST00000288602 NKTRP30414 1462 aaKnown RBP25.24■■□□□ 1.63
BRAF-201ENST00000288602 U2SURPO15042 1029 aaKnown RBP25.23■■□□□ 1.63
BRAF-201ENST00000288602 BCAR3O75815 825 aa25.23■■□□□ 1.63
BRAF-201ENST00000288602 WASLO00401 505 aaPredicted RBP25.23■■□□□ 1.63
BRAF-201ENST00000288602 LTKP29376 864 aa25.23■■□□□ 1.63
BRAF-201ENST00000288602 TRHP20396 242 aaPredicted RBP25.22■■□□□ 1.63
BRAF-201ENST00000288602 IQSEC2Q5JU85 1478 aa25.2■■□□□ 1.63
BRAF-201ENST00000288602 NGEFQ8N5V2 710 aa25.2■■□□□ 1.62
BRAF-201ENST00000288602 ANKRD26Q9UPS8 1709 aa25.17■■□□□ 1.62
BRAF-201ENST00000288602 PPIP5K1Q6PFW1 1433 aa25.17■■□□□ 1.62
BRAF-201ENST00000288602 PPM1GO15355 546 aaPredicted RBP25.17■■□□□ 1.62
BRAF-201ENST00000288602 NUDT16Q96DE0 195 aaKnown RBP25.16■■□□□ 1.62
BRAF-201ENST00000288602 SLC26A8Q96RN1 970 aa25.16■■□□□ 1.62
BRAF-201ENST00000288602 MED14O60244 1454 aa25.15■■□□□ 1.62
BRAF-201ENST00000288602 KIF20BQ96Q89 1820 aa25.15■■□□□ 1.62
BRAF-201ENST00000288602 ROBO2Q9HCK4 1378 aa25.15■■□□□ 1.62
BRAF-201ENST00000288602 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.14■■□□□ 1.62
BRAF-201ENST00000288602 PHF23Q9BUL5 403 aaPredicted RBP25.14■■□□□ 1.62
BRAF-201ENST00000288602 ZRANB1Q9UGI0 708 aa25.14■■□□□ 1.62
BRAF-201ENST00000288602 ADAMTS13Q76LX8 1427 aa25.14■■□□□ 1.62
BRAF-201ENST00000288602 COL3A1P02461 1466 aaPredicted RBP25.14■■□□□ 1.62
BRAF-201ENST00000288602 SKAP1Q86WV1 359 aa25.14■■□□□ 1.61
BRAF-201ENST00000288602 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
BRAF-201ENST00000288602 ATP7BP35670 1465 aa25.13■■□□□ 1.61
BRAF-201ENST00000288602 NME9Q86XW9 330 aa25.12■■□□□ 1.61
BRAF-201ENST00000288602 PLEKHF1Q96S99 279 aa25.11■■□□□ 1.61
BRAF-201ENST00000288602 FAM135BQ49AJ0 1406 aa25.11■■□□□ 1.61
BRAF-201ENST00000288602 TECPR2O15040 1411 aa25.11■■□□□ 1.61
BRAF-201ENST00000288602 DIAPH1O60610 1272 aaKnown RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms