RNA–Protein interactions for RNA: ENST00000287777.4

KLHL40-201, Transcript of kelch like family member 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL40, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40-201ENST00000287777 NGEFQ8N5V2 710 aa24.44■■□□□ 1.5
KLHL40-201ENST00000287777 NKTRP30414 1462 aaKnown RBP24.44■■□□□ 1.5
KLHL40-201ENST00000287777 SPINK5Q9NQ38 1064 aaPredicted RBP24.42■■□□□ 1.5
KLHL40-201ENST00000287777 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.41■■□□□ 1.5
KLHL40-201ENST00000287777 ANKRD36BQ8N2N9 1353 aa24.41■■□□□ 1.5
KLHL40-201ENST00000287777 CGNL1Q0VF96 1302 aa24.41■■□□□ 1.5
KLHL40-201ENST00000287777 E9PSI1 815 aa24.4■■□□□ 1.5
KLHL40-201ENST00000287777 ANP32AP39687 249 aaKnown RBP24.39■■□□□ 1.49
KLHL40-201ENST00000287777 CYB5RLQ6IPT4 315 aa24.39■■□□□ 1.49
KLHL40-201ENST00000287777 MS4A1P11836 297 aa24.38■■□□□ 1.49
KLHL40-201ENST00000287777 TNNT2P45379 298 aaPredicted RBP24.38■■□□□ 1.49
KLHL40-201ENST00000287777 DIP2BQ9P265 1576 aa24.38■■□□□ 1.49
KLHL40-201ENST00000287777 NSD2O96028 1365 aa24.37■■□□□ 1.49
KLHL40-201ENST00000287777 NOP58Q9Y2X3 529 aaKnown RBP24.36■■□□□ 1.49
KLHL40-201ENST00000287777 DMRT2Q9Y5R5 561 aa24.36■■□□□ 1.49
KLHL40-201ENST00000287777 IQSEC2Q5JU85 1478 aa24.35■■□□□ 1.49
KLHL40-201ENST00000287777 CABP2Q9NPB3 220 aa24.34■■□□□ 1.49
KLHL40-201ENST00000287777 PTPRMP28827 1452 aa24.34■■□□□ 1.49
KLHL40-201ENST00000287777 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
KLHL40-201ENST00000287777 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
KLHL40-201ENST00000287777 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
KLHL40-201ENST00000287777 KDM2BQ8NHM5 1336 aa24.34■■□□□ 1.49
KLHL40-201ENST00000287777 PDE4AP27815 886 aa24.33■■□□□ 1.49
KLHL40-201ENST00000287777 REREQ9P2R6 1566 aa24.33■■□□□ 1.48
KLHL40-201ENST00000287777 SAFB2Q14151 953 aaKnown RBP eCLIP24.32■■□□□ 1.48
KLHL40-201ENST00000287777 WWC1Q8IX03 1113 aa24.32■■□□□ 1.48
KLHL40-201ENST00000287777 IPO9Q96P70 1041 aaKnown RBP24.32■■□□□ 1.48
KLHL40-201ENST00000287777 NINLQ9Y2I6 1382 aa24.32■■□□□ 1.48
KLHL40-201ENST00000287777 MTHFSP49914 203 aa24.32■■□□□ 1.48
KLHL40-201ENST00000287777 RUNDC1Q96C34 613 aa24.32■■□□□ 1.48
KLHL40-201ENST00000287777 CLTCQ00610 1675 aaKnown RBP24.31■■□□□ 1.48
KLHL40-201ENST00000287777 FAM69CQ0P6D2 419 aa24.31■■□□□ 1.48
KLHL40-201ENST00000287777 STK26Q9P289 416 aa24.31■■□□□ 1.48
KLHL40-201ENST00000287777 BACH2Q9BYV9 841 aa24.31■■□□□ 1.48
KLHL40-201ENST00000287777 TSPOAP1O95153 1857 aa24.31■■□□□ 1.48
KLHL40-201ENST00000287777 CFAP53Q96M91 514 aa24.3■■□□□ 1.48
KLHL40-201ENST00000287777 FBXO31Q5XUX0 539 aaPredicted RBP24.29■■□□□ 1.48
KLHL40-201ENST00000287777 YTHDC2Q9H6S0 1430 aaKnown RBP24.29■■□□□ 1.48
KLHL40-201ENST00000287777 CENPQQ7L2Z9 268 aaPredicted RBP24.29■■□□□ 1.48
KLHL40-201ENST00000287777 A0A1W2PP64 1363 aa24.29■■□□□ 1.48
KLHL40-201ENST00000287777 BCAR3O75815 825 aa24.28■■□□□ 1.48
KLHL40-201ENST00000287777 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
KLHL40-201ENST00000287777 AGLP35573 1532 aa24.28■■□□□ 1.48
KLHL40-201ENST00000287777 ABCC11Q96J66 1382 aa24.28■■□□□ 1.48
KLHL40-201ENST00000287777 ALKQ9UM73 1620 aa24.27■■□□□ 1.48
KLHL40-201ENST00000287777 PAK3O75914 559 aaPredicted RBP24.27■■□□□ 1.48
KLHL40-201ENST00000287777 SRPK2P78362 688 aaKnown RBP24.26■■□□□ 1.47
KLHL40-201ENST00000287777 SKAP1Q86WV1 359 aa24.26■■□□□ 1.47
KLHL40-201ENST00000287777 TCP11L2Q8N4U5 519 aa24.26■■□□□ 1.47
KLHL40-201ENST00000287777 ATAD2Q6PL18 1390 aa24.25■■□□□ 1.47
KLHL40-201ENST00000287777 ANKRD26Q9UPS8 1709 aa24.25■■□□□ 1.47
KLHL40-201ENST00000287777 PHF23Q9BUL5 403 aaPredicted RBP24.25■■□□□ 1.47
KLHL40-201ENST00000287777 PRAM1Q96QH2 718 aa24.24■■□□□ 1.47
KLHL40-201ENST00000287777 RRP7AQ9Y3A4 280 aaKnown RBP24.24■■□□□ 1.47
KLHL40-201ENST00000287777 NEUROD2Q15784 382 aa24.23■■□□□ 1.47
KLHL40-201ENST00000287777 MINK1Q8N4C8 1332 aaPredicted RBP24.22■■□□□ 1.47
KLHL40-201ENST00000287777 ADGRB2O60241 1585 aa24.22■■□□□ 1.47
KLHL40-201ENST00000287777 POGKQ9P215 609 aa24.21■■□□□ 1.47
KLHL40-201ENST00000287777 PPP6R1Q9UPN7 881 aa24.21■■□□□ 1.47
KLHL40-201ENST00000287777 CD163L1Q9NR16 1453 aa24.21■■□□□ 1.47
KLHL40-201ENST00000287777 SPATA31D1Q6ZQQ2 1576 aa24.2■■□□□ 1.47
KLHL40-201ENST00000287777 CCDC27Q2M243 656 aa24.2■■□□□ 1.46
KLHL40-201ENST00000287777 WDR63Q8IWG1 891 aa24.2■■□□□ 1.46
KLHL40-201ENST00000287777 ZBTB47Q9UFB7 747 aaPredicted RBP24.2■■□□□ 1.46
KLHL40-201ENST00000287777 NPM2Q86SE8 214 aaKnown RBP24.2■■□□□ 1.46
KLHL40-201ENST00000287777 STAG3Q9UJ98 1225 aa24.19■■□□□ 1.46
KLHL40-201ENST00000287777 MED14O60244 1454 aa24.19■■□□□ 1.46
KLHL40-201ENST00000287777 PDE3AQ14432 1141 aa24.18■■□□□ 1.46
KLHL40-201ENST00000287777 NCBP3Q53F19 620 aaKnown RBP24.18■■□□□ 1.46
KLHL40-201ENST00000287777 TERF2IPQ9NYB0 399 aa24.18■■□□□ 1.46
KLHL40-201ENST00000287777 A2ML1A8K2U0 1454 aa24.18■■□□□ 1.46
KLHL40-201ENST00000287777 NLRP1Q9C000 1473 aa24.17■■□□□ 1.46
KLHL40-201ENST00000287777 ARHGEF40Q8TER5 1519 aa24.17■■□□□ 1.46
KLHL40-201ENST00000287777 COL3A1P02461 1466 aaPredicted RBP24.17■■□□□ 1.46
KLHL40-201ENST00000287777 SETD1AO15047 1707 aaKnown RBP24.16■■□□□ 1.46
KLHL40-201ENST00000287777 U2AF1L5P0DN76 240 aaPredicted RBP24.16■■□□□ 1.46
KLHL40-201ENST00000287777 U2AF1Q01081 240 aaKnown RBP eCLIP24.16■■□□□ 1.46
KLHL40-201ENST00000287777 GGNBP2Q9H3C7 697 aa24.16■■□□□ 1.46
KLHL40-201ENST00000287777 DLC1Q96QB1 1528 aa24.15■■□□□ 1.46
KLHL40-201ENST00000287777 KIF20BQ96Q89 1820 aa24.14■■□□□ 1.46
KLHL40-201ENST00000287777 FYB1O15117 783 aa24.13■■□□□ 1.45
KLHL40-201ENST00000287777 CANXP27824 592 aaKnown RBP24.13■■□□□ 1.45
KLHL40-201ENST00000287777 RARSP54136 660 aaKnown RBP24.12■■□□□ 1.45
KLHL40-201ENST00000287777 CDK19Q9BWU1 502 aa24.12■■□□□ 1.45
KLHL40-201ENST00000287777 RIMS2Q9UQ26 1411 aa24.12■■□□□ 1.45
KLHL40-201ENST00000287777 HDGFL2Q7Z4V5 671 aaPredicted RBP24.11■■□□□ 1.45
KLHL40-201ENST00000287777 PANK1Q8TE04 598 aa24.09■■□□□ 1.45
KLHL40-201ENST00000287777 MYH16Q9H6N6 1097 aa24.08■■□□□ 1.45
KLHL40-201ENST00000287777 FRAT1Q92837 279 aaPredicted RBP24.07■■□□□ 1.44
KLHL40-201ENST00000287777 PLEKHF1Q96S99 279 aa24.07■■□□□ 1.44
KLHL40-201ENST00000287777 COG6Q9Y2V7 657 aa24.07■■□□□ 1.44
KLHL40-201ENST00000287777 CLUAP1Q96AJ1 413 aa24.07■■□□□ 1.44
KLHL40-201ENST00000287777 CABP1Q9NZU7 370 aa24.07■■□□□ 1.44
KLHL40-201ENST00000287777 U2SURPO15042 1029 aaKnown RBP24.06■■□□□ 1.44
KLHL40-201ENST00000287777 MLECQ14165 292 aa24.06■■□□□ 1.44
KLHL40-201ENST00000287777 NRXN3Q9Y4C0 1643 aa24.06■■□□□ 1.44
KLHL40-201ENST00000287777 FAM161AQ3B820 660 aa24.05■■□□□ 1.44
KLHL40-201ENST00000287777 ATP7BP35670 1465 aa24.05■■□□□ 1.44
KLHL40-201ENST00000287777 IGHDP01880 384 aa24.04■■□□□ 1.44
KLHL40-201ENST00000287777 KIF13AQ9H1H9 1805 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms