RNA–Protein interactions for RNA: ENST00000287097.5

CD109-201, Transcript of CD109 molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD109, Length 9,130 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-201ENST00000287097 ERICH4A6NGS2 130 aa9.5□□□□□ -0.89
CD109-201ENST00000287097 LUC7LQ9NQ29 371 aaKnown RBP9.5□□□□□ -0.89
CD109-201ENST00000287097 TICAM2Q86XR7 235 aa9.5□□□□□ -0.89
CD109-201ENST00000287097 SLC26A8Q96RN1 970 aa9.5□□□□□ -0.89
CD109-201ENST00000287097 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
CD109-201ENST00000287097 LRRCC1Q9C099 1032 aa9.5□□□□□ -0.89
CD109-201ENST00000287097 WWC2Q6AWC2 1192 aa9.49□□□□□ -0.89
CD109-201ENST00000287097 PHLDB1Q86UU1 1377 aa9.49□□□□□ -0.89
CD109-201ENST00000287097 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
CD109-201ENST00000287097 ZNHIT6Q9NWK9 470 aaKnown RBP9.49□□□□□ -0.89
CD109-201ENST00000287097 FYB1O15117 783 aa9.49□□□□□ -0.89
CD109-201ENST00000287097 SPATA24Q86W54 205 aa9.49□□□□□ -0.89
CD109-201ENST00000287097 CCDC97Q96F63 343 aaPredicted RBP9.49□□□□□ -0.89
CD109-201ENST00000287097 RNF214Q8ND24 703 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 BRPF1P55201 1214 aaPredicted RBP9.48□□□□□ -0.89
CD109-201ENST00000287097 CCDC91Q7Z6B0 441 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 SETD5Q9C0A6 1442 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 FAM193AP78312 1265 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 PPM1EQ8WY54 764 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 CCDC112Q8NEF3 446 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 XBP1P17861 261 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 VPS37DQ86XT2 251 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 ZNF428Q96B54 188 aa9.48□□□□□ -0.89
CD109-201ENST00000287097 SYTL4Q96C24 671 aaPredicted RBP9.48□□□□□ -0.89
CD109-201ENST00000287097 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
CD109-201ENST00000287097 IQCEQ6IPM2 695 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 TXLNBQ8N3L3 684 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 RRP9O43818 475 aaKnown RBP9.47□□□□□ -0.89
CD109-201ENST00000287097 KINO60870 393 aaKnown RBP9.47□□□□□ -0.89
CD109-201ENST00000287097 EVA1CP58658 441 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 DHX8Q14562 1220 aaKnown RBP9.47□□□□□ -0.89
CD109-201ENST00000287097 GPATCH11Q8N954 259 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 C9orf78Q9NZ63 289 aaPredicted RBP9.47□□□□□ -0.89
CD109-201ENST00000287097 MAP2K1Q02750 393 aaPredicted RBP9.47□□□□□ -0.89
CD109-201ENST00000287097 STAMBPO95630 424 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 PANK3Q9H999 370 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 NUP155O75694 1391 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
CD109-201ENST00000287097 HNRNPMP52272 730 aaKnown RBP eCLIP9.47□□□□□ -0.89
CD109-201ENST00000287097 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 DDX11Q96FC9 970 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 TERF2IPQ9NYB0 399 aa9.47□□□□□ -0.89
CD109-201ENST00000287097 MPNDQ8N594 471 aa9.46□□□□□ -0.89
CD109-201ENST00000287097 L3MBTL2Q969R5 705 aa9.46□□□□□ -0.89
CD109-201ENST00000287097 KIF3BO15066 747 aa9.46□□□□□ -0.89
CD109-201ENST00000287097 CCDC27Q2M243 656 aa9.46□□□□□ -0.89
CD109-201ENST00000287097 SPC24Q8NBT2 197 aa9.46□□□□□ -0.89
CD109-201ENST00000287097 TSPY26PQ9H489 355 aa9.46□□□□□ -0.89
CD109-201ENST00000287097 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.46□□□□□ -0.89
CD109-201ENST00000287097 IFIT2P09913 472 aaKnown RBP9.46□□□□□ -0.89
CD109-201ENST00000287097 EEA1Q15075 1411 aa9.46□□□□□ -0.9
CD109-201ENST00000287097 CAVIN1Q6NZI2 390 aaKnown RBP9.46□□□□□ -0.9
CD109-201ENST00000287097 CFAP45Q9UL16 551 aa9.46□□□□□ -0.9
CD109-201ENST00000287097 INTS3Q68E01 1043 aaKnown RBP9.46□□□□□ -0.9
CD109-201ENST00000287097 CFAP57Q96MR6 1250 aa9.46□□□□□ -0.9
CD109-201ENST00000287097 UQCRHLA0A096LP55 91 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 UQCRHP07919 91 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 LRRFIP2Q9Y608 721 aaKnown RBP9.45□□□□□ -0.9
CD109-201ENST00000287097 TNIKQ9UKE5 1360 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 C1orf141Q5JVX7 400 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 RALYLQ86SE5 291 aaKnown RBP9.45□□□□□ -0.9
CD109-201ENST00000287097 LNPKQ9C0E8 428 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 TXLNAP40222 546 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 KIF7Q2M1P5 1343 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 SHTN1A0MZ66 631 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 FMNL2Q96PY5 1086 aa9.45□□□□□ -0.9
CD109-201ENST00000287097 PIP4K2AP48426 406 aaPredicted RBP9.44□□□□□ -0.9
CD109-201ENST00000287097 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
CD109-201ENST00000287097 APAF1O14727 1248 aa9.44□□□□□ -0.9
CD109-201ENST00000287097 NLRP13Q86W25 1043 aa9.44□□□□□ -0.9
CD109-201ENST00000287097 KLHL34Q8N239 644 aa9.44□□□□□ -0.9
CD109-201ENST00000287097 CDK5RAP3Q96JB5 506 aa9.44□□□□□ -0.9
CD109-201ENST00000287097 WRNQ14191 1432 aaPredicted RBP eCLIP9.44□□□□□ -0.9
CD109-201ENST00000287097 RRP1P56182 461 aaKnown RBP9.44□□□□□ -0.9
CD109-201ENST00000287097 ZKSCAN2Q63HK3 967 aa9.44□□□□□ -0.9
CD109-201ENST00000287097 PPFIBP1Q86W92 1011 aa9.44□□□□□ -0.9
CD109-201ENST00000287097 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
CD109-201ENST00000287097 IPO4Q8TEX9 1081 aaKnown RBP9.44□□□□□ -0.9
CD109-201ENST00000287097 MBD3O95983 291 aa9.43□□□□□ -0.9
CD109-201ENST00000287097 TRAK2O60296 914 aa9.43□□□□□ -0.9
CD109-201ENST00000287097 SERPINC1P01008 464 aa9.43□□□□□ -0.9
CD109-201ENST00000287097 TEFQ10587 303 aa9.43□□□□□ -0.9
CD109-201ENST00000287097 FAM177A1Q8N128 213 aaPredicted RBP9.43□□□□□ -0.9
CD109-201ENST00000287097 PDCL3Q9H2J4 239 aa9.43□□□□□ -0.9
CD109-201ENST00000287097 ST20-MTHFSA0A0A6YYL1 179 aa9.43□□□□□ -0.9
CD109-201ENST00000287097 TMCO3Q6UWJ1 677 aa9.43□□□□□ -0.9
CD109-201ENST00000287097 ATP2B1P20020 1258 aa9.43□□□□□ -0.9
CD109-201ENST00000287097 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
CD109-201ENST00000287097 DDX23Q9BUQ8 820 aaKnown RBP9.43□□□□□ -0.9
CD109-201ENST00000287097 CEP164Q9UPV0 1460 aa9.42□□□□□ -0.9
CD109-201ENST00000287097 AIMP1Q12904 312 aaKnown RBP9.42□□□□□ -0.9
CD109-201ENST00000287097 HSP90AB4PQ58FF6 505 aa9.42□□□□□ -0.9
CD109-201ENST00000287097 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
CD109-201ENST00000287097 CEBPZQ03701 1054 aaKnown RBP9.41□□□□□ -0.9
CD109-201ENST00000287097 NEUROD6Q96NK8 337 aa9.41□□□□□ -0.9
CD109-201ENST00000287097 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms