RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 IPO9Q96P70 1041 aaKnown RBP24.26■■□□□ 1.47
PDLIM3-201ENST00000284767 PAK3O75914 559 aaPredicted RBP24.24■■□□□ 1.47
PDLIM3-201ENST00000284767 PRAM1Q96QH2 718 aa24.24■■□□□ 1.47
PDLIM3-201ENST00000284767 ALKQ9UM73 1620 aa24.24■■□□□ 1.47
PDLIM3-201ENST00000284767 RIMS2Q9UQ26 1411 aa24.24■■□□□ 1.47
PDLIM3-201ENST00000284767 YTHDC2Q9H6S0 1430 aaKnown RBP24.23■■□□□ 1.47
PDLIM3-201ENST00000284767 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
PDLIM3-201ENST00000284767 MINK1Q8N4C8 1332 aaPredicted RBP24.23■■□□□ 1.47
PDLIM3-201ENST00000284767 EVC2Q86UK5 1308 aa24.22■■□□□ 1.47
PDLIM3-201ENST00000284767 CEBPAP49715 358 aaPredicted RBP24.22■■□□□ 1.47
PDLIM3-201ENST00000284767 ADAMTS8Q9UP79 889 aa24.21■■□□□ 1.47
PDLIM3-201ENST00000284767 PTPRMP28827 1452 aa24.21■■□□□ 1.47
PDLIM3-201ENST00000284767 NSD3Q9BZ95 1437 aa24.21■■□□□ 1.47
PDLIM3-201ENST00000284767 NPC1L1Q9UHC9 1359 aa24.2■■□□□ 1.46
PDLIM3-201ENST00000284767 POGKQ9P215 609 aa24.2■■□□□ 1.46
PDLIM3-201ENST00000284767 TNRQ92752 1358 aa24.17■■□□□ 1.46
PDLIM3-201ENST00000284767 TNNT2P45379 298 aaPredicted RBP24.17■■□□□ 1.46
PDLIM3-201ENST00000284767 SRPK2P78362 688 aaKnown RBP24.17■■□□□ 1.46
PDLIM3-201ENST00000284767 WAPLQ7Z5K2 1190 aa24.15■■□□□ 1.46
PDLIM3-201ENST00000284767 ZBTB47Q9UFB7 747 aaPredicted RBP24.15■■□□□ 1.46
PDLIM3-201ENST00000284767 RRP1P56182 461 aaKnown RBP24.15■■□□□ 1.46
PDLIM3-201ENST00000284767 NBR1Q14596 966 aa24.15■■□□□ 1.46
PDLIM3-201ENST00000284767 BLMP54132 1417 aaPredicted RBP24.14■■□□□ 1.46
PDLIM3-201ENST00000284767 WDR43Q15061 677 aaKnown RBP eCLIP24.12■■□□□ 1.45
PDLIM3-201ENST00000284767 CDCA7LQ96GN5 454 aa24.12■■□□□ 1.45
PDLIM3-201ENST00000284767 PLEKHH1Q9ULM0 1364 aa24.12■■□□□ 1.45
PDLIM3-201ENST00000284767 PDE3BQ13370 1112 aa24.11■■□□□ 1.45
PDLIM3-201ENST00000284767 METP08581 1390 aa24.1■■□□□ 1.45
PDLIM3-201ENST00000284767 NRXN3Q9Y4C0 1643 aa24.1■■□□□ 1.45
PDLIM3-201ENST00000284767 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
PDLIM3-201ENST00000284767 TCERG1O14776 1098 aaKnown RBP24.09■■□□□ 1.45
PDLIM3-201ENST00000284767 MORC1Q86VD1 984 aa24.09■■□□□ 1.45
PDLIM3-201ENST00000284767 ANKRD36BQ8N2N9 1353 aa24.08■■□□□ 1.44
PDLIM3-201ENST00000284767 CCDC146Q8IYE0 955 aa24.07■■□□□ 1.44
PDLIM3-201ENST00000284767 RCAN3Q9UKA8 241 aa24.07■■□□□ 1.44
PDLIM3-201ENST00000284767 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
PDLIM3-201ENST00000284767 PUS7Q96PZ0 661 aaKnown RBP24.07■■□□□ 1.44
PDLIM3-201ENST00000284767 CDK19Q9BWU1 502 aa24.07■■□□□ 1.44
PDLIM3-201ENST00000284767 A0A1W2PP64 1363 aa24.07■■□□□ 1.44
PDLIM3-201ENST00000284767 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.06■■□□□ 1.44
PDLIM3-201ENST00000284767 UBR1Q8IWV7 1749 aa24.05■■□□□ 1.44
PDLIM3-201ENST00000284767 TXNDC2Q86VQ3 553 aa24.05■■□□□ 1.44
PDLIM3-201ENST00000284767 CGNL1Q0VF96 1302 aa24.05■■□□□ 1.44
PDLIM3-201ENST00000284767 TMEM2Q9UHN6 1383 aa24.04■■□□□ 1.44
PDLIM3-201ENST00000284767 INSRP06213 1382 aa24.04■■□□□ 1.44
PDLIM3-201ENST00000284767 EXOC6Q8TAG9 804 aa24.04■■□□□ 1.44
PDLIM3-201ENST00000284767 LTKP29376 864 aa24.03■■□□□ 1.44
PDLIM3-201ENST00000284767 MS4A1P11836 297 aa24.01■■□□□ 1.43
PDLIM3-201ENST00000284767 CABP1Q9NZU7 370 aa24.01■■□□□ 1.43
PDLIM3-201ENST00000284767 ABCC11Q96J66 1382 aa24■■□□□ 1.43
PDLIM3-201ENST00000284767 ATAD2Q6PL18 1390 aa23.99■■□□□ 1.43
PDLIM3-201ENST00000284767 CD163L1Q9NR16 1453 aa23.99■■□□□ 1.43
PDLIM3-201ENST00000284767 C3P01024 1663 aa23.99■■□□□ 1.43
PDLIM3-201ENST00000284767 GGNBP2Q9H3C7 697 aa23.99■■□□□ 1.43
PDLIM3-201ENST00000284767 USP32Q8NFA0 1604 aa23.98■■□□□ 1.43
PDLIM3-201ENST00000284767 MTHFSP49914 203 aa23.98■■□□□ 1.43
PDLIM3-201ENST00000284767 DLC1Q96QB1 1528 aa23.97■■□□□ 1.43
PDLIM3-201ENST00000284767 HDGFP51858 240 aaKnown RBP23.97■■□□□ 1.43
PDLIM3-201ENST00000284767 FER1L4A9Z1Z3 1794 aa23.96■■□□□ 1.43
PDLIM3-201ENST00000284767 PDE4AP27815 886 aa23.96■■□□□ 1.43
PDLIM3-201ENST00000284767 APAF1O14727 1248 aa23.96■■□□□ 1.43
PDLIM3-201ENST00000284767 POLR3AO14802 1390 aaPredicted RBP23.95■■□□□ 1.43
PDLIM3-201ENST00000284767 SLC26A8Q96RN1 970 aa23.95■■□□□ 1.42
PDLIM3-201ENST00000284767 BACH2Q9BYV9 841 aa23.95■■□□□ 1.42
PDLIM3-201ENST00000284767 NCKAP5LQ9HCH0 1330 aa23.94■■□□□ 1.42
PDLIM3-201ENST00000284767 TERF2IPQ9NYB0 399 aa23.94■■□□□ 1.42
PDLIM3-201ENST00000284767 ADAMTS13Q76LX8 1427 aa23.94■■□□□ 1.42
PDLIM3-201ENST00000284767 NINLQ9Y2I6 1382 aa23.93■■□□□ 1.42
PDLIM3-201ENST00000284767 NLRP1Q9C000 1473 aa23.93■■□□□ 1.42
PDLIM3-201ENST00000284767 FYB1O15117 783 aa23.92■■□□□ 1.42
PDLIM3-201ENST00000284767 WASLO00401 505 aaPredicted RBP23.9■■□□□ 1.42
PDLIM3-201ENST00000284767 ROBO2Q9HCK4 1378 aa23.9■■□□□ 1.42
PDLIM3-201ENST00000284767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.9■■□□□ 1.42
PDLIM3-201ENST00000284767 USP35Q9P2H5 1018 aa23.9■■□□□ 1.42
PDLIM3-201ENST00000284767 SHPRHQ149N8 1683 aa23.9■■□□□ 1.42
PDLIM3-201ENST00000284767 HDGFL2Q7Z4V5 671 aaPredicted RBP23.89■■□□□ 1.42
PDLIM3-201ENST00000284767 ZNF521Q96K83 1311 aa23.89■■□□□ 1.41
PDLIM3-201ENST00000284767 NSD2O96028 1365 aa23.89■■□□□ 1.41
PDLIM3-201ENST00000284767 NPM2Q86SE8 214 aaKnown RBP23.89■■□□□ 1.41
PDLIM3-201ENST00000284767 FBLN1P23142 703 aa23.87■■□□□ 1.41
PDLIM3-201ENST00000284767 PLEKHG1Q9ULL1 1385 aa23.87■■□□□ 1.41
PDLIM3-201ENST00000284767 SPINK5Q9NQ38 1064 aaPredicted RBP23.86■■□□□ 1.41
PDLIM3-201ENST00000284767 TECPR2O15040 1411 aa23.85■■□□□ 1.41
PDLIM3-201ENST00000284767 DMRT2Q9Y5R5 561 aa23.85■■□□□ 1.41
PDLIM3-201ENST00000284767 EID1Q9Y6B2 187 aa23.85■■□□□ 1.41
PDLIM3-201ENST00000284767 NUTM2FA1L443 756 aa23.85■■□□□ 1.41
PDLIM3-201ENST00000284767 PLIN1O60240 522 aa23.84■■□□□ 1.41
PDLIM3-201ENST00000284767 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
PDLIM3-201ENST00000284767 RRP7AQ9Y3A4 280 aaKnown RBP23.84■■□□□ 1.41
PDLIM3-201ENST00000284767 GOLGA2Q08379 1002 aa23.83■■□□□ 1.41
PDLIM3-201ENST00000284767 DUSP27Q5VZP5 1158 aa23.83■■□□□ 1.41
PDLIM3-201ENST00000284767 NUDT16Q96DE0 195 aaKnown RBP23.83■■□□□ 1.41
PDLIM3-201ENST00000284767 FAM135BQ49AJ0 1406 aa23.83■■□□□ 1.41
PDLIM3-201ENST00000284767 PPIP5K1Q6PFW1 1433 aa23.83■■□□□ 1.41
PDLIM3-201ENST00000284767 KNDC1Q76NI1 1749 aa23.83■■□□□ 1.41
PDLIM3-201ENST00000284767 CPS1P31327 1500 aa23.83■■□□□ 1.41
PDLIM3-201ENST00000284767 PTPRUQ92729 1446 aa23.83■■□□□ 1.4
PDLIM3-201ENST00000284767 CFAP53Q96M91 514 aa23.82■■□□□ 1.4
PDLIM3-201ENST00000284767 PPM1GO15355 546 aaPredicted RBP23.82■■□□□ 1.4
PDLIM3-201ENST00000284767 PRR36Q9H6K5 1346 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms