RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CLUAP1Q96AJ1 413 aa7.9□□□□□ -1.14
TNFSF4-201ENST00000281834 SLC26A8Q96RN1 970 aa7.9□□□□□ -1.14
TNFSF4-201ENST00000281834 ADGRB3O60242 1522 aa7.9□□□□□ -1.14
TNFSF4-201ENST00000281834 RIMBP3CA6NJZ7 1639 aa7.9□□□□□ -1.15
TNFSF4-201ENST00000281834 RIMBP3BA6NNM3 1639 aa7.9□□□□□ -1.15
TNFSF4-201ENST00000281834 RIMBP3Q9UFD9 1639 aa7.9□□□□□ -1.15
TNFSF4-201ENST00000281834 BCL11AQ9H165 835 aa7.9□□□□□ -1.15
TNFSF4-201ENST00000281834 TERF2IPQ9NYB0 399 aa7.9□□□□□ -1.15
TNFSF4-201ENST00000281834 IQGAP1P46940 1657 aa7.9□□□□□ -1.15
TNFSF4-201ENST00000281834 RNF123Q5XPI4 1314 aa7.89□□□□□ -1.15
TNFSF4-201ENST00000281834 RGS3P49796 1198 aa7.89□□□□□ -1.15
TNFSF4-201ENST00000281834 CFAP74Q9C0B2 1584 aa7.89□□□□□ -1.15
TNFSF4-201ENST00000281834 MSH5O43196 834 aa7.89□□□□□ -1.15
TNFSF4-201ENST00000281834 HDGFL2Q7Z4V5 671 aaPredicted RBP7.89□□□□□ -1.15
TNFSF4-201ENST00000281834 LAS1LQ9Y4W2 734 aaKnown RBP7.89□□□□□ -1.15
TNFSF4-201ENST00000281834 LAMC1P11047 1609 aa7.89□□□□□ -1.15
TNFSF4-201ENST00000281834 SLFN5Q08AF3 891 aa7.88□□□□□ -1.15
TNFSF4-201ENST00000281834 LMTK2Q8IWU2 1503 aa7.88□□□□□ -1.15
TNFSF4-201ENST00000281834 BLMP54132 1417 aaPredicted RBP7.88□□□□□ -1.15
TNFSF4-201ENST00000281834 WWC1Q8IX03 1113 aa7.88□□□□□ -1.15
TNFSF4-201ENST00000281834 A0A1W2PP64 1363 aa7.88□□□□□ -1.15
TNFSF4-201ENST00000281834 ZRANB1Q9UGI0 708 aa7.88□□□□□ -1.15
TNFSF4-201ENST00000281834 KDM5AP29375 1690 aaKnown RBP7.88□□□□□ -1.15
TNFSF4-201ENST00000281834 SYNMO15061 1565 aa7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 PANK1Q8TE04 598 aa7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 TSR2Q969E8 191 aaKnown RBP7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 FYB1O15117 783 aa7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 HMOX1P09601 288 aa7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 COG6Q9Y2V7 657 aa7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 CAMSAP1Q5T5Y3 1602 aa7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 RUNDC1Q96C34 613 aa7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 MAPK8IP3Q9UPT6 1336 aa7.87□□□□□ -1.15
TNFSF4-201ENST00000281834 SIGLEC1Q9BZZ2 1709 aa7.86□□□□□ -1.15
TNFSF4-201ENST00000281834 E9PSI1 815 aa7.86□□□□□ -1.15
TNFSF4-201ENST00000281834 YTHDC2Q9H6S0 1430 aaKnown RBP7.86□□□□□ -1.15
TNFSF4-201ENST00000281834 ZMYM3Q14202 1370 aa7.86□□□□□ -1.15
TNFSF4-201ENST00000281834 RBM33Q96EV2 1170 aaKnown RBP7.86□□□□□ -1.15
TNFSF4-201ENST00000281834 TNNQ9UQP3 1299 aa7.86□□□□□ -1.15
TNFSF4-201ENST00000281834 NRXN1Q9ULB1 1477 aa7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 RRS1Q15050 365 aaKnown RBP7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 NME9Q86XW9 330 aa7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 ANP32EQ9BTT0 268 aa7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 ADGRB1O14514 1584 aa7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 ANKRD36BQ8N2N9 1353 aa7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 SBNO2Q9Y2G9 1366 aa7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 ANP32AP39687 249 aaKnown RBP7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 RIMS2Q9UQ26 1411 aa7.85□□□□□ -1.15
TNFSF4-201ENST00000281834 ELL2O00472 640 aaPredicted RBP7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 EMILIN1Q9Y6C2 1016 aa7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 NPC1L1Q9UHC9 1359 aa7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 GLI2P10070 1586 aa7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 TCERG1O14776 1098 aaKnown RBP7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 MYT1Q01538 1121 aa7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 NBR1Q14596 966 aa7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 NEXMIFQ5QGS0 1516 aa7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 RICTORQ6R327 1708 aa7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 ZNF521Q96K83 1311 aa7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 THUMPD2Q9BTF0 503 aaKnown RBP7.84□□□□□ -1.15
TNFSF4-201ENST00000281834 DIP2BQ9P265 1576 aa7.84□□□□□ -1.16
TNFSF4-201ENST00000281834 ZMYM4Q5VZL5 1548 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 DIAPH1O60610 1272 aaKnown RBP7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 PMFBP1Q8TBY8 1022 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 ARHGAP31Q2M1Z3 1444 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 METP08581 1390 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 MYOM1P52179 1685 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 NEFMP07197 916 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 RIPK4P57078 832 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 NUDT16Q96DE0 195 aaKnown RBP7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 TULP4Q9NRJ4 1543 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 PIK3C2BO00750 1634 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 C14orf37Q86TY3 774 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 QRICH2Q9H0J4 1663 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 POLR3AO14802 1390 aaPredicted RBP7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 ATAD2Q6PL18 1390 aa7.83□□□□□ -1.16
TNFSF4-201ENST00000281834 PDE4AP27815 886 aa7.82□□□□□ -1.16
TNFSF4-201ENST00000281834 PPLO60437 1756 aa7.82□□□□□ -1.16
TNFSF4-201ENST00000281834 LTKP29376 864 aa7.82□□□□□ -1.16
TNFSF4-201ENST00000281834 PRKAR2BP31323 418 aa7.82□□□□□ -1.16
TNFSF4-201ENST00000281834 NUTM2GQ5VZR2 741 aa7.82□□□□□ -1.16
TNFSF4-201ENST00000281834 WASLO00401 505 aaPredicted RBP7.82□□□□□ -1.16
TNFSF4-201ENST00000281834 PAK3O75914 559 aaPredicted RBP7.82□□□□□ -1.16
TNFSF4-201ENST00000281834 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
TNFSF4-201ENST00000281834 HDGFP51858 240 aaKnown RBP7.81□□□□□ -1.16
TNFSF4-201ENST00000281834 MYO5BQ9ULV0 1848 aa7.81□□□□□ -1.16
TNFSF4-201ENST00000281834 TNRQ92752 1358 aa7.81□□□□□ -1.16
TNFSF4-201ENST00000281834 EXOSC9Q06265 439 aaKnown RBP7.81□□□□□ -1.16
TNFSF4-201ENST00000281834 FTSJ3Q8IY81 847 aaKnown RBP7.81□□□□□ -1.16
TNFSF4-201ENST00000281834 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.81□□□□□ -1.16
TNFSF4-201ENST00000281834 SMC4Q9NTJ3 1288 aa7.81□□□□□ -1.16
TNFSF4-201ENST00000281834 KIAA1210Q9ULL0 1709 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 A2ML1A8K2U0 1454 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 NKTRP30414 1462 aaKnown RBP7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 TMPOP42166 694 aaKnown RBP7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 COG3Q96JB2 828 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 EID1Q9Y6B2 187 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 FANCIQ9NVI1 1328 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 RLBP1P12271 317 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 POLKQ9UBT6 870 aa7.8□□□□□ -1.16
TNFSF4-201ENST00000281834 IFT172Q9UG01 1749 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms