RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 A2ML1A8K2U0 1454 aa14.85□□□□□ -0.03
SCLT1-201ENST00000281142 ZNF142P52746 1687 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-201ENST00000281142 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-201ENST00000281142 PPLO60437 1756 aa14.84□□□□□ -0.03
SCLT1-201ENST00000281142 KDM2BQ8NHM5 1336 aa14.84□□□□□ -0.03
SCLT1-201ENST00000281142 NEXMIFQ5QGS0 1516 aa14.82□□□□□ -0.04
SCLT1-201ENST00000281142 FRAT2O75474 233 aaPredicted RBP14.82□□□□□ -0.04
SCLT1-201ENST00000281142 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
SCLT1-201ENST00000281142 DISP3Q9P2K9 1392 aa14.82□□□□□ -0.04
SCLT1-201ENST00000281142 C8orf34Q49A92 452 aa14.82□□□□□ -0.04
SCLT1-201ENST00000281142 PANK3Q9H999 370 aa14.82□□□□□ -0.04
SCLT1-201ENST00000281142 RGS3P49796 1198 aa14.81□□□□□ -0.04
SCLT1-201ENST00000281142 BLMP54132 1417 aaPredicted RBP14.81□□□□□ -0.04
SCLT1-201ENST00000281142 ADAMTS8Q9UP79 889 aa14.81□□□□□ -0.04
SCLT1-201ENST00000281142 DAXXQ9UER7 740 aaPredicted RBP14.8□□□□□ -0.04
SCLT1-201ENST00000281142 NUTM2DQ5VT03 806 aaPredicted RBP14.79□□□□□ -0.04
SCLT1-201ENST00000281142 PLEKHH1Q9ULM0 1364 aa14.78□□□□□ -0.04
SCLT1-201ENST00000281142 FAM161AQ3B820 660 aa14.77□□□□□ -0.04
SCLT1-201ENST00000281142 ZFYVE9O95405 1425 aa14.77□□□□□ -0.04
SCLT1-201ENST00000281142 TESK2Q96S53 571 aa14.77□□□□□ -0.05
SCLT1-201ENST00000281142 PRAG1Q86YV5 1406 aa14.77□□□□□ -0.05
SCLT1-201ENST00000281142 RPGRIP1LQ68CZ1 1315 aa14.77□□□□□ -0.05
SCLT1-201ENST00000281142 RIMS2Q9UQ26 1411 aa14.77□□□□□ -0.05
SCLT1-201ENST00000281142 TMEM2Q9UHN6 1383 aa14.76□□□□□ -0.05
SCLT1-201ENST00000281142 TRPM1Q7Z4N2 1603 aa14.76□□□□□ -0.05
SCLT1-201ENST00000281142 MYOM2P54296 1465 aa14.76□□□□□ -0.05
SCLT1-201ENST00000281142 CENPQQ7L2Z9 268 aaPredicted RBP14.76□□□□□ -0.05
SCLT1-201ENST00000281142 ADGRF5Q8IZF2 1346 aa14.76□□□□□ -0.05
SCLT1-201ENST00000281142 SLIT1O75093 1534 aa14.76□□□□□ -0.05
SCLT1-201ENST00000281142 DUSP27Q5VZP5 1158 aa14.76□□□□□ -0.05
SCLT1-201ENST00000281142 PKNOX2Q96KN3 472 aa14.75□□□□□ -0.05
SCLT1-201ENST00000281142 ARHGAP23Q9P227 1491 aa14.75□□□□□ -0.05
SCLT1-201ENST00000281142 NRXN1Q9ULB1 1477 aa14.75□□□□□ -0.05
SCLT1-201ENST00000281142 THEMISQ8N1K5 641 aaPredicted RBP14.74□□□□□ -0.05
SCLT1-201ENST00000281142 LMTK3Q96Q04 1460 aa14.74□□□□□ -0.05
SCLT1-201ENST00000281142 SENP3Q9H4L4 574 aaPredicted RBP14.74□□□□□ -0.05
SCLT1-201ENST00000281142 LTKP29376 864 aa14.73□□□□□ -0.05
SCLT1-201ENST00000281142 PIK3C2GO75747 1445 aa14.72□□□□□ -0.05
SCLT1-201ENST00000281142 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
SCLT1-201ENST00000281142 CCDC146Q8IYE0 955 aa14.71□□□□□ -0.06
SCLT1-201ENST00000281142 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.06
SCLT1-201ENST00000281142 NRXN3Q9Y4C0 1643 aa14.7□□□□□ -0.06
SCLT1-201ENST00000281142 IQGAP1P46940 1657 aa14.7□□□□□ -0.06
SCLT1-201ENST00000281142 STAC3Q96MF2 364 aa14.7□□□□□ -0.06
SCLT1-201ENST00000281142 RSPH6AQ9H0K4 717 aa14.7□□□□□ -0.06
SCLT1-201ENST00000281142 TXNDC2Q86VQ3 553 aa14.69□□□□□ -0.06
SCLT1-201ENST00000281142 BCAR3O75815 825 aa14.69□□□□□ -0.06
SCLT1-201ENST00000281142 PPP2R1AP30153 589 aa14.69□□□□□ -0.06
SCLT1-201ENST00000281142 HSPA2P54652 639 aa14.69□□□□□ -0.06
SCLT1-201ENST00000281142 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.69□□□□□ -0.06
SCLT1-201ENST00000281142 POGKQ9P215 609 aa14.69□□□□□ -0.06
SCLT1-201ENST00000281142 SCAF11Q99590 1463 aaKnown RBP14.68□□□□□ -0.06
SCLT1-201ENST00000281142 KIAA1210Q9ULL0 1709 aa14.68□□□□□ -0.06
SCLT1-201ENST00000281142 SEC24BO95487 1268 aa14.68□□□□□ -0.06
SCLT1-201ENST00000281142 WDR43Q15061 677 aaKnown RBP eCLIP14.68□□□□□ -0.062e-6■■■■■ 30.3
SCLT1-201ENST00000281142 SETD1AO15047 1707 aaKnown RBP14.68□□□□□ -0.06
SCLT1-201ENST00000281142 ZNF521Q96K83 1311 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 GOLGA2Q08379 1002 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 EID1Q9Y6B2 187 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 GPRASP1Q5JY77 1395 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 USP19O94966 1318 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 IGHDP01880 384 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 HDGFP51858 240 aaKnown RBP14.67□□□□□ -0.06
SCLT1-201ENST00000281142 CFAP70Q5T0N1 1121 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 SETBP1Q9Y6X0 1596 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 TMF1P82094 1093 aa14.67□□□□□ -0.06
SCLT1-201ENST00000281142 INSRP06213 1382 aa14.66□□□□□ -0.06
SCLT1-201ENST00000281142 ALKQ9UM73 1620 aa14.66□□□□□ -0.06
SCLT1-201ENST00000281142 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
SCLT1-201ENST00000281142 LAMC1P11047 1609 aa14.66□□□□□ -0.06
SCLT1-201ENST00000281142 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
SCLT1-201ENST00000281142 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
SCLT1-201ENST00000281142 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
SCLT1-201ENST00000281142 SLFN5Q08AF3 891 aa14.64□□□□□ -0.07
SCLT1-201ENST00000281142 C14orf93Q9H972 538 aaKnown RBP14.64□□□□□ -0.07
SCLT1-201ENST00000281142 STRCQ7RTU9 1775 aa14.64□□□□□ -0.07
SCLT1-201ENST00000281142 NCKAP5LQ9HCH0 1330 aa14.64□□□□□ -0.07
SCLT1-201ENST00000281142 FAM43AQ8N2R8 423 aa14.64□□□□□ -0.07
SCLT1-201ENST00000281142 ASXL1Q8IXJ9 1541 aa14.64□□□□□ -0.07
SCLT1-201ENST00000281142 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
SCLT1-201ENST00000281142 ADGRB1O14514 1584 aa14.63□□□□□ -0.07
SCLT1-201ENST00000281142 ARXQ96QS3 562 aa14.63□□□□□ -0.07
SCLT1-201ENST00000281142 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-201ENST00000281142 KNSTRNQ9Y448 316 aa14.62□□□□□ -0.07
SCLT1-201ENST00000281142 APAF1O14727 1248 aa14.62□□□□□ -0.07
SCLT1-201ENST00000281142 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-201ENST00000281142 MED14O60244 1454 aa14.62□□□□□ -0.07
SCLT1-201ENST00000281142 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
SCLT1-201ENST00000281142 SLC26A8Q96RN1 970 aa14.61□□□□□ -0.07
SCLT1-201ENST00000281142 NPHP4O75161 1426 aaPredicted RBP14.6□□□□□ -0.07
SCLT1-201ENST00000281142 RRAGDQ9NQL2 400 aaPredicted RBP14.6□□□□□ -0.07
SCLT1-201ENST00000281142 METP08581 1390 aa14.59□□□□□ -0.07
SCLT1-201ENST00000281142 PANK1Q8TE04 598 aa14.59□□□□□ -0.07
SCLT1-201ENST00000281142 TRMT2AQ8IZ69 625 aaKnown RBP14.58□□□□□ -0.07
SCLT1-201ENST00000281142 DIP2AQ14689 1571 aa14.58□□□□□ -0.08
SCLT1-201ENST00000281142 COG6Q9Y2V7 657 aa14.58□□□□□ -0.08
SCLT1-201ENST00000281142 EIF3AQ14152 1382 aaKnown RBP14.58□□□□□ -0.08
SCLT1-201ENST00000281142 VIRMAQ69YN4 1812 aaKnown RBP14.56□□□□□ -0.08
SCLT1-201ENST00000281142 NKTRP30414 1462 aaKnown RBP14.56□□□□□ -0.08
SCLT1-201ENST00000281142 ARHGEF28Q8N1W1 1705 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms