RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SPATA31D1Q6ZQQ2 1576 aa23.82■■□□□ 1.4
CAPN1-201ENST00000279247 YTHDC2Q9H6S0 1430 aaKnown RBP23.82■■□□□ 1.4
CAPN1-201ENST00000279247 RIMS2Q9UQ26 1411 aa23.82■■□□□ 1.4
CAPN1-201ENST00000279247 ARHGEF28Q8N1W1 1705 aaKnown RBP23.81■■□□□ 1.4
CAPN1-201ENST00000279247 TULP4Q9NRJ4 1543 aa23.8■■□□□ 1.4
CAPN1-201ENST00000279247 RCAN3Q9UKA8 241 aa23.8■■□□□ 1.4
CAPN1-201ENST00000279247 APAF1O14727 1248 aa23.79■■□□□ 1.4
CAPN1-201ENST00000279247 ZFYVE9O95405 1425 aa23.79■■□□□ 1.4
CAPN1-201ENST00000279247 NEUROD2Q15784 382 aa23.78■■□□□ 1.4
CAPN1-201ENST00000279247 GGNBP2Q9H3C7 697 aa23.78■■□□□ 1.4
CAPN1-201ENST00000279247 CGNL1Q0VF96 1302 aa23.78■■□□□ 1.4
CAPN1-201ENST00000279247 BLMP54132 1417 aaPredicted RBP23.77■■□□□ 1.4
CAPN1-201ENST00000279247 LTKP29376 864 aa23.77■■□□□ 1.4
CAPN1-201ENST00000279247 TXNDC2Q86VQ3 553 aa23.77■■□□□ 1.4
CAPN1-201ENST00000279247 CDK19Q9BWU1 502 aa23.77■■□□□ 1.4
CAPN1-201ENST00000279247 NPC1L1Q9UHC9 1359 aa23.77■■□□□ 1.4
CAPN1-201ENST00000279247 ALKQ9UM73 1620 aa23.76■■□□□ 1.39
CAPN1-201ENST00000279247 PLIN1O60240 522 aa23.76■■□□□ 1.39
CAPN1-201ENST00000279247 MTHFSP49914 203 aa23.76■■□□□ 1.39
CAPN1-201ENST00000279247 PLEKHH1Q9ULM0 1364 aa23.75■■□□□ 1.39
CAPN1-201ENST00000279247 SLC26A8Q96RN1 970 aa23.75■■□□□ 1.39
CAPN1-201ENST00000279247 CABP1Q9NZU7 370 aa23.74■■□□□ 1.39
CAPN1-201ENST00000279247 PDE3BQ13370 1112 aa23.73■■□□□ 1.39
CAPN1-201ENST00000279247 PTPRMP28827 1452 aa23.73■■□□□ 1.39
CAPN1-201ENST00000279247 A0A1W2PP64 1363 aa23.72■■□□□ 1.39
CAPN1-201ENST00000279247 RRP7AQ9Y3A4 280 aaKnown RBP23.72■■□□□ 1.39
CAPN1-201ENST00000279247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.71■■□□□ 1.39
CAPN1-201ENST00000279247 FER1L4A9Z1Z3 1794 aa23.71■■□□□ 1.39
CAPN1-201ENST00000279247 RRP1P56182 461 aaKnown RBP23.7■■□□□ 1.39
CAPN1-201ENST00000279247 CCDC136Q96JN2 1154 aa23.7■■□□□ 1.39
CAPN1-201ENST00000279247 ANKRD36BQ8N2N9 1353 aa23.7■■□□□ 1.39
CAPN1-201ENST00000279247 NUTM2FA1L443 756 aa23.7■■□□□ 1.38
CAPN1-201ENST00000279247 METP08581 1390 aa23.69■■□□□ 1.38
CAPN1-201ENST00000279247 C3P01024 1663 aa23.69■■□□□ 1.38
CAPN1-201ENST00000279247 ERICH6BQ5W0A0 696 aa23.68■■□□□ 1.38
CAPN1-201ENST00000279247 NCKAP5LQ9HCH0 1330 aa23.67■■□□□ 1.38
CAPN1-201ENST00000279247 TERF2IPQ9NYB0 399 aa23.67■■□□□ 1.38
CAPN1-201ENST00000279247 TMEM2Q9UHN6 1383 aa23.67■■□□□ 1.38
CAPN1-201ENST00000279247 FBLN1P23142 703 aa23.67■■□□□ 1.38
CAPN1-201ENST00000279247 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.66■■□□□ 1.38
CAPN1-201ENST00000279247 EXOC6Q8TAG9 804 aa23.66■■□□□ 1.38
CAPN1-201ENST00000279247 GOLGA2Q08379 1002 aa23.66■■□□□ 1.38
CAPN1-201ENST00000279247 RNF123Q5XPI4 1314 aa23.65■■□□□ 1.38
CAPN1-201ENST00000279247 PPM1GO15355 546 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-201ENST00000279247 SPINK5Q9NQ38 1064 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-201ENST00000279247 HDGFL2Q7Z4V5 671 aaPredicted RBP23.64■■□□□ 1.38
CAPN1-201ENST00000279247 ATAD2Q6PL18 1390 aa23.63■■□□□ 1.37
CAPN1-201ENST00000279247 RIMS1Q86UR5 1692 aaKnown RBP23.63■■□□□ 1.37
CAPN1-201ENST00000279247 U2SURPO15042 1029 aaKnown RBP23.63■■□□□ 1.37
CAPN1-201ENST00000279247 U2AF1L5P0DN76 240 aaPredicted RBP23.63■■□□□ 1.37
CAPN1-201ENST00000279247 U2AF1Q01081 240 aaKnown RBP eCLIP23.63■■□□□ 1.37
CAPN1-201ENST00000279247 CFAP53Q96M91 514 aa23.63■■□□□ 1.37
CAPN1-201ENST00000279247 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
CAPN1-201ENST00000279247 HDGFP51858 240 aaKnown RBP23.62■■□□□ 1.37
CAPN1-201ENST00000279247 FYB1O15117 783 aa23.62■■□□□ 1.37
CAPN1-201ENST00000279247 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
CAPN1-201ENST00000279247 DUSP27Q5VZP5 1158 aa23.6■■□□□ 1.37
CAPN1-201ENST00000279247 POLR3AO14802 1390 aaPredicted RBP23.59■■□□□ 1.37
CAPN1-201ENST00000279247 EID1Q9Y6B2 187 aa23.59■■□□□ 1.37
CAPN1-201ENST00000279247 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
CAPN1-201ENST00000279247 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
CAPN1-201ENST00000279247 RBM33Q96EV2 1170 aaKnown RBP23.57■■□□□ 1.36
CAPN1-201ENST00000279247 RBM19Q9Y4C8 960 aaKnown RBP23.57■■□□□ 1.36
CAPN1-201ENST00000279247 INSRP06213 1382 aa23.56■■□□□ 1.36
CAPN1-201ENST00000279247 TCP11L2Q8N4U5 519 aa23.56■■□□□ 1.36
CAPN1-201ENST00000279247 C20orf194Q5TEA3 1177 aa23.56■■□□□ 1.36
CAPN1-201ENST00000279247 WASLO00401 505 aaPredicted RBP23.55■■□□□ 1.36
CAPN1-201ENST00000279247 ABCC11Q96J66 1382 aa23.55■■□□□ 1.36
CAPN1-201ENST00000279247 ZNF521Q96K83 1311 aa23.55■■□□□ 1.36
CAPN1-201ENST00000279247 SLFN5Q08AF3 891 aa23.54■■□□□ 1.36
CAPN1-201ENST00000279247 NLRP1Q9C000 1473 aa23.54■■□□□ 1.36
CAPN1-201ENST00000279247 ZRANB1Q9UGI0 708 aa23.54■■□□□ 1.36
CAPN1-201ENST00000279247 NUDT16Q96DE0 195 aaKnown RBP23.52■■□□□ 1.36
CAPN1-201ENST00000279247 CD163L1Q9NR16 1453 aa23.52■■□□□ 1.36
CAPN1-201ENST00000279247 CRBNQ96SW2 442 aa23.52■■□□□ 1.36
CAPN1-201ENST00000279247 RUNDC1Q96C34 613 aa23.51■■□□□ 1.35
CAPN1-201ENST00000279247 NRXN3Q9Y4C0 1643 aa23.51■■□□□ 1.35
CAPN1-201ENST00000279247 WWC1Q8IX03 1113 aa23.51■■□□□ 1.35
CAPN1-201ENST00000279247 NINLQ9Y2I6 1382 aa23.5■■□□□ 1.35
CAPN1-201ENST00000279247 NME9Q86XW9 330 aa23.5■■□□□ 1.35
CAPN1-201ENST00000279247 ADAMTS13Q76LX8 1427 aa23.49■■□□□ 1.35
CAPN1-201ENST00000279247 NSD2O96028 1365 aa23.49■■□□□ 1.35
CAPN1-201ENST00000279247 ROBO2Q9HCK4 1378 aa23.49■■□□□ 1.35
CAPN1-201ENST00000279247 PPIP5K1Q6PFW1 1433 aa23.48■■□□□ 1.35
CAPN1-201ENST00000279247 BCAR3O75815 825 aa23.47■■□□□ 1.35
CAPN1-201ENST00000279247 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
CAPN1-201ENST00000279247 SOX12O15370 315 aa23.46■■□□□ 1.35
CAPN1-201ENST00000279247 AMOTL2Q9Y2J4 779 aa23.46■■□□□ 1.35
CAPN1-201ENST00000279247 E9PSI1 815 aa23.45■■□□□ 1.34
CAPN1-201ENST00000279247 CCDC61Q9Y6R9 512 aa23.45■■□□□ 1.34
CAPN1-201ENST00000279247 SHPRHQ149N8 1683 aa23.44■■□□□ 1.34
CAPN1-201ENST00000279247 ADAMTSL3P82987 1691 aa23.44■■□□□ 1.34
CAPN1-201ENST00000279247 PLEKHG1Q9ULL1 1385 aa23.43■■□□□ 1.34
CAPN1-201ENST00000279247 USP32Q8NFA0 1604 aa23.43■■□□□ 1.34
CAPN1-201ENST00000279247 EMILIN1Q9Y6C2 1016 aa23.43■■□□□ 1.34
CAPN1-201ENST00000279247 PTPRUQ92729 1446 aa23.42■■□□□ 1.34
CAPN1-201ENST00000279247 PRR36Q9H6K5 1346 aa23.42■■□□□ 1.34
CAPN1-201ENST00000279247 DLC1Q96QB1 1528 aa23.42■■□□□ 1.34
CAPN1-201ENST00000279247 DIAPH1O60610 1272 aaKnown RBP23.41■■□□□ 1.34
CAPN1-201ENST00000279247 BCL2L13Q9BXK5 485 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms