RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 ABCC1P33527 1531 aa11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 NCOA3Q9Y6Q9 1424 aa11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 FANCAO15360 1455 aa11.61□□□□□ -0.55
HMGCLL1-201ENST00000274901 FAM13BQ9NYF5 915 aa11.61□□□□□ -0.55
HMGCLL1-201ENST00000274901 ISY1Q9ULR0 285 aaKnown RBP11.6□□□□□ -0.55
HMGCLL1-201ENST00000274901 PPP1R9BQ96SB3 815 aa11.6□□□□□ -0.55
HMGCLL1-201ENST00000274901 MAST1Q9Y2H9 1570 aa11.59□□□□□ -0.55
HMGCLL1-201ENST00000274901 A2MP01023 1474 aa11.59□□□□□ -0.55
HMGCLL1-201ENST00000274901 E9PSI1 815 aa11.59□□□□□ -0.55
HMGCLL1-201ENST00000274901 CANXP27824 592 aaKnown RBP11.59□□□□□ -0.55
HMGCLL1-201ENST00000274901 ZSCAN30Q86W11 494 aa11.59□□□□□ -0.55
HMGCLL1-201ENST00000274901 FAM135AQ9P2D6 1515 aa11.59□□□□□ -0.55
HMGCLL1-201ENST00000274901 PRDM10Q9NQV6 1147 aa11.59□□□□□ -0.55
HMGCLL1-201ENST00000274901 ABCA9Q8IUA7 1624 aa11.58□□□□□ -0.55
HMGCLL1-201ENST00000274901 SCAPERQ9BY12 1400 aa11.58□□□□□ -0.56
HMGCLL1-201ENST00000274901 R3HCC1Q9Y3T6 440 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-201ENST00000274901 TMF1P82094 1093 aa11.57□□□□□ -0.56
HMGCLL1-201ENST00000274901 BCL2L13Q9BXK5 485 aa11.57□□□□□ -0.56
HMGCLL1-201ENST00000274901 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
HMGCLL1-201ENST00000274901 ZHX1Q9UKY1 873 aaPredicted RBP11.57□□□□□ -0.56
HMGCLL1-201ENST00000274901 ZMYM3Q14202 1370 aa11.57□□□□□ -0.56
HMGCLL1-201ENST00000274901 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
HMGCLL1-201ENST00000274901 CCDC173Q0VFZ6 552 aa11.57□□□□□ -0.56
HMGCLL1-201ENST00000274901 KNSTRNQ9Y448 316 aa11.57□□□□□ -0.56
HMGCLL1-201ENST00000274901 PLXNC1O60486 1568 aa11.56□□□□□ -0.56
HMGCLL1-201ENST00000274901 LAMC1P11047 1609 aa11.56□□□□□ -0.56
HMGCLL1-201ENST00000274901 NASPP49321 788 aaPredicted RBP11.56□□□□□ -0.56
HMGCLL1-201ENST00000274901 HSCBQ8IWL3 235 aa11.56□□□□□ -0.56
HMGCLL1-201ENST00000274901 PMFBP1Q8TBY8 1022 aa11.56□□□□□ -0.56
HMGCLL1-201ENST00000274901 DUOX2Q9NRD8 1548 aa11.56□□□□□ -0.56
HMGCLL1-201ENST00000274901 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
HMGCLL1-201ENST00000274901 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
HMGCLL1-201ENST00000274901 PLA2R1Q13018 1463 aa11.55□□□□□ -0.56
HMGCLL1-201ENST00000274901 PIK3C2GO75747 1445 aa11.55□□□□□ -0.56
HMGCLL1-201ENST00000274901 CD109Q6YHK3 1445 aa11.55□□□□□ -0.56
HMGCLL1-201ENST00000274901 NINLQ9Y2I6 1382 aa11.55□□□□□ -0.56
HMGCLL1-201ENST00000274901 CD2BP2O95400 341 aaKnown RBP11.54□□□□□ -0.56
HMGCLL1-201ENST00000274901 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
HMGCLL1-201ENST00000274901 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-201ENST00000274901 RAB3GAP1Q15042 981 aa11.54□□□□□ -0.56
HMGCLL1-201ENST00000274901 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-201ENST00000274901 UQCRHLA0A096LP55 91 aa11.53□□□□□ -0.56
HMGCLL1-201ENST00000274901 UQCRHP07919 91 aa11.53□□□□□ -0.56
HMGCLL1-201ENST00000274901 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
HMGCLL1-201ENST00000274901 ZFYVE16Q7Z3T8 1539 aa11.53□□□□□ -0.56
HMGCLL1-201ENST00000274901 TERF1P54274 439 aa11.53□□□□□ -0.56
HMGCLL1-201ENST00000274901 FGD1P98174 961 aa11.53□□□□□ -0.56
HMGCLL1-201ENST00000274901 SMC5Q8IY18 1101 aa11.53□□□□□ -0.56
HMGCLL1-201ENST00000274901 CCDC144AA2RUR9 1427 aa11.53□□□□□ -0.56
HMGCLL1-201ENST00000274901 SMAP1Q8IYB5 467 aaPredicted RBP11.52□□□□□ -0.56
HMGCLL1-201ENST00000274901 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
HMGCLL1-201ENST00000274901 KIF3BO15066 747 aa11.52□□□□□ -0.57
HMGCLL1-201ENST00000274901 MSNP26038 577 aaKnown RBP11.52□□□□□ -0.57
HMGCLL1-201ENST00000274901 SSFA2P28290 1259 aa11.52□□□□□ -0.57
HMGCLL1-201ENST00000274901 UNC13BO14795 1591 aa11.51□□□□□ -0.57
HMGCLL1-201ENST00000274901 RRP7AQ9Y3A4 280 aaKnown RBP11.51□□□□□ -0.57
HMGCLL1-201ENST00000274901 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
HMGCLL1-201ENST00000274901 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
HMGCLL1-201ENST00000274901 ATP7AQ04656 1500 aa11.51□□□□□ -0.57
HMGCLL1-201ENST00000274901 RIMBP3CA6NJZ7 1639 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 RIMBP3BA6NNM3 1639 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 RIMBP3Q9UFD9 1639 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 GBP4Q96PP9 640 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 KIF2CQ99661 725 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 AK9Q5TCS8 1911 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 MYOM1P52179 1685 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 RAPGEF3O95398 923 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 NEUROD2Q15784 382 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 SNX21Q969T3 373 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
HMGCLL1-201ENST00000274901 SKOR2Q2VWA4 1001 aaPredicted RBP11.49□□□□□ -0.57
HMGCLL1-201ENST00000274901 ZNF500O60304 480 aaPredicted RBP11.49□□□□□ -0.57
HMGCLL1-201ENST00000274901 RBM25P49756 843 aaKnown RBP11.49□□□□□ -0.57
HMGCLL1-201ENST00000274901 NOL7Q9UMY1 257 aaKnown RBP11.49□□□□□ -0.57
HMGCLL1-201ENST00000274901 RNF17Q9BXT8 1623 aaKnown RBP11.49□□□□□ -0.57
HMGCLL1-201ENST00000274901 SYNMO15061 1565 aa11.48□□□□□ -0.57
HMGCLL1-201ENST00000274901 HSP90AB1P08238 724 aaKnown RBP11.48□□□□□ -0.57
HMGCLL1-201ENST00000274901 RBSNQ9H1K0 784 aa11.48□□□□□ -0.57
HMGCLL1-201ENST00000274901 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
HMGCLL1-201ENST00000274901 IQGAP3Q86VI3 1631 aa11.48□□□□□ -0.57
HMGCLL1-201ENST00000274901 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
HMGCLL1-201ENST00000274901 ZSCAN20P17040 1043 aaPredicted RBP11.47□□□□□ -0.57
HMGCLL1-201ENST00000274901 INO80Q9ULG1 1556 aaPredicted RBP11.47□□□□□ -0.57
HMGCLL1-201ENST00000274901 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
HMGCLL1-201ENST00000274901 PDLIM2Q96JY6 352 aa11.47□□□□□ -0.57
HMGCLL1-201ENST00000274901 DMTNQ08495 405 aa11.46□□□□□ -0.57
HMGCLL1-201ENST00000274901 FAM69CQ0P6D2 419 aa11.46□□□□□ -0.57
HMGCLL1-201ENST00000274901 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.57
HMGCLL1-201ENST00000274901 KLHL40Q2TBA0 621 aa11.46□□□□□ -0.57
HMGCLL1-201ENST00000274901 TSC1Q92574 1164 aa11.46□□□□□ -0.57
HMGCLL1-201ENST00000274901 DDX49Q9Y6V7 483 aaKnown RBP11.46□□□□□ -0.57
HMGCLL1-201ENST00000274901 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.58
HMGCLL1-201ENST00000274901 IBTKQ9P2D0 1353 aaPredicted RBP11.45□□□□□ -0.58
HMGCLL1-201ENST00000274901 ZNF518AQ6AHZ1 1483 aa11.45□□□□□ -0.58
HMGCLL1-201ENST00000274901 BAG4O95429 457 aaKnown RBP11.45□□□□□ -0.58
HMGCLL1-201ENST00000274901 KCNA4P22459 653 aa11.45□□□□□ -0.58
HMGCLL1-201ENST00000274901 DYNC1I1O14576 645 aa11.45□□□□□ -0.58
HMGCLL1-201ENST00000274901 IQGAP1P46940 1657 aa11.45□□□□□ -0.58
HMGCLL1-201ENST00000274901 KIDINS220Q9ULH0 1771 aa11.45□□□□□ -0.58
HMGCLL1-201ENST00000274901 ZNF445P59923 1031 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms