RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 GBP4Q96PP9 640 aa16.07■□□□□ 0.16
HERC6-202ENST00000273960 CFAP70Q5T0N1 1121 aa16.07■□□□□ 0.16
HERC6-202ENST00000273960 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
HERC6-202ENST00000273960 POLR1AO95602 1720 aaPredicted RBP16.07■□□□□ 0.16
HERC6-202ENST00000273960 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
HERC6-202ENST00000273960 CAVIN1Q6NZI2 390 aaKnown RBP16.06■□□□□ 0.16
HERC6-202ENST00000273960 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
HERC6-202ENST00000273960 TRAK1Q9UPV9 953 aa16.06■□□□□ 0.16
HERC6-202ENST00000273960 ZNF521Q96K83 1311 aa16.05■□□□□ 0.16
HERC6-202ENST00000273960 CHAMP1Q96JM3 812 aa16.05■□□□□ 0.16
HERC6-202ENST00000273960 CDC42BPAQ5VT25 1732 aa16.05■□□□□ 0.16
HERC6-202ENST00000273960 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
HERC6-202ENST00000273960 ITPRIPQ8IWB1 547 aa16.05■□□□□ 0.16
HERC6-202ENST00000273960 RNF214Q8ND24 703 aa16.05■□□□□ 0.16
HERC6-202ENST00000273960 STK26Q9P289 416 aa16.05■□□□□ 0.16
HERC6-202ENST00000273960 CALD1Q05682 793 aaKnown RBP16.04■□□□□ 0.16
HERC6-202ENST00000273960 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
HERC6-202ENST00000273960 NKTRP30414 1462 aaKnown RBP16.04■□□□□ 0.16
HERC6-202ENST00000273960 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
HERC6-202ENST00000273960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.04■□□□□ 0.16
HERC6-202ENST00000273960 ADGRL2O95490 1459 aa16.04■□□□□ 0.16
HERC6-202ENST00000273960 CD2BP2O95400 341 aaKnown RBP16.03■□□□□ 0.16
HERC6-202ENST00000273960 IGSF3O75054 1194 aa16.03■□□□□ 0.16
HERC6-202ENST00000273960 TMEM132EQ6IEE7 984 aa16.03■□□□□ 0.16
HERC6-202ENST00000273960 FAM135AQ9P2D6 1515 aa16.03■□□□□ 0.16
HERC6-202ENST00000273960 SAMD9LQ8IVG5 1584 aa16.03■□□□□ 0.16
HERC6-202ENST00000273960 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.03■□□□□ 0.16
HERC6-202ENST00000273960 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
HERC6-202ENST00000273960 ABCC2Q92887 1545 aa16.03■□□□□ 0.16
HERC6-202ENST00000273960 PLCH2O75038 1416 aa16.02■□□□□ 0.16
HERC6-202ENST00000273960 FOXD4L6Q3SYB3 417 aaPredicted RBP16.02■□□□□ 0.16
HERC6-202ENST00000273960 FOXD4L3Q6VB84 417 aaPredicted RBP16.02■□□□□ 0.16
HERC6-202ENST00000273960 WWC1Q8IX03 1113 aa16.02■□□□□ 0.16
HERC6-202ENST00000273960 OFD1O75665 1012 aa16.02■□□□□ 0.15
HERC6-202ENST00000273960 RARSP54136 660 aaKnown RBP16.02■□□□□ 0.15
HERC6-202ENST00000273960 AAMPQ13685 434 aa16.02■□□□□ 0.15
HERC6-202ENST00000273960 CCDC173Q0VFZ6 552 aa16.01■□□□□ 0.15
HERC6-202ENST00000273960 RBM27Q9P2N5 1060 aaKnown RBP16.01■□□□□ 0.15
HERC6-202ENST00000273960 ERBINQ96RT1 1412 aa16■□□□□ 0.15
HERC6-202ENST00000273960 GOLGA6L22H0YM25 854 aa16■□□□□ 0.15
HERC6-202ENST00000273960 PTMAP06454 111 aaKnown RBP16■□□□□ 0.15
HERC6-202ENST00000273960 TSR2Q969E8 191 aaKnown RBP16■□□□□ 0.15
HERC6-202ENST00000273960 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
HERC6-202ENST00000273960 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
HERC6-202ENST00000273960 CBX1P83916 185 aa15.99■□□□□ 0.15
HERC6-202ENST00000273960 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
HERC6-202ENST00000273960 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
HERC6-202ENST00000273960 FANCAO15360 1455 aa15.98■□□□□ 0.15
HERC6-202ENST00000273960 TRMT2AQ8IZ69 625 aaKnown RBP15.96■□□□□ 0.15
HERC6-202ENST00000273960 TCP11L2Q8N4U5 519 aa15.96■□□□□ 0.15
HERC6-202ENST00000273960 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
HERC6-202ENST00000273960 GAS2L2Q8NHY3 880 aa15.96■□□□□ 0.15
HERC6-202ENST00000273960 ADGRL1O94910 1474 aa15.96■□□□□ 0.15
HERC6-202ENST00000273960 ASXL2Q76L83 1435 aa15.96■□□□□ 0.15
HERC6-202ENST00000273960 SHANK2Q9UPX8 1470 aa15.96■□□□□ 0.14
HERC6-202ENST00000273960 UHRF1BP1Q6BDS2 1440 aa15.95■□□□□ 0.14
HERC6-202ENST00000273960 RBSNQ9H1K0 784 aa15.95■□□□□ 0.14
HERC6-202ENST00000273960 C1orf115Q9H7X2 142 aa15.95■□□□□ 0.14
HERC6-202ENST00000273960 ADGBQ8N7X0 1667 aa15.94■□□□□ 0.14
HERC6-202ENST00000273960 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
HERC6-202ENST00000273960 ZNF830Q96NB3 372 aaPredicted RBP15.94■□□□□ 0.14
HERC6-202ENST00000273960 PRPF40AO75400 957 aaKnown RBP15.94■□□□□ 0.14
HERC6-202ENST00000273960 ADGRF5Q8IZF2 1346 aa15.94■□□□□ 0.14
HERC6-202ENST00000273960 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
HERC6-202ENST00000273960 PKP1Q13835 747 aa15.93■□□□□ 0.14
HERC6-202ENST00000273960 DZIP1LQ8IYY4 767 aaKnown RBP15.93■□□□□ 0.14
HERC6-202ENST00000273960 PLCB2Q00722 1185 aa15.93■□□□□ 0.14
HERC6-202ENST00000273960 SKOR2Q2VWA4 1001 aaPredicted RBP15.93■□□□□ 0.14
HERC6-202ENST00000273960 RAB3GAP1Q15042 981 aa15.93■□□□□ 0.14
HERC6-202ENST00000273960 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
HERC6-202ENST00000273960 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
HERC6-202ENST00000273960 ANKRD45Q5TZF3 282 aa15.92■□□□□ 0.14
HERC6-202ENST00000273960 C17orf53Q8N3J3 647 aaPredicted RBP15.92■□□□□ 0.14
HERC6-202ENST00000273960 APBB1O00213 710 aa15.92■□□□□ 0.14
HERC6-202ENST00000273960 MVPQ14764 893 aaKnown RBP15.92■□□□□ 0.14
HERC6-202ENST00000273960 CDC42BPBQ9Y5S2 1711 aa15.92■□□□□ 0.14
HERC6-202ENST00000273960 BAG4O95429 457 aaKnown RBP15.91■□□□□ 0.14
HERC6-202ENST00000273960 NOL8Q76FK4 1167 aaKnown RBP15.91■□□□□ 0.14
HERC6-202ENST00000273960 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
HERC6-202ENST00000273960 ADCY10Q96PN6 1610 aa15.91■□□□□ 0.14
HERC6-202ENST00000273960 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
HERC6-202ENST00000273960 PRAG1Q86YV5 1406 aa15.91■□□□□ 0.14
HERC6-202ENST00000273960 SYCE3A1L190 88 aa15.9■□□□□ 0.14
HERC6-202ENST00000273960 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
HERC6-202ENST00000273960 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
HERC6-202ENST00000273960 CD109Q6YHK3 1445 aa15.9■□□□□ 0.14
HERC6-202ENST00000273960 CDCA8Q53HL2 280 aa15.9■□□□□ 0.14
HERC6-202ENST00000273960 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
HERC6-202ENST00000273960 ZSCAN23Q3MJ62 389 aa15.89■□□□□ 0.13
HERC6-202ENST00000273960 A2MP01023 1474 aa15.89■□□□□ 0.13
HERC6-202ENST00000273960 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
HERC6-202ENST00000273960 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
HERC6-202ENST00000273960 PPP1R9BQ96SB3 815 aa15.89■□□□□ 0.13
HERC6-202ENST00000273960 ISY1Q9ULR0 285 aaKnown RBP15.89■□□□□ 0.13
HERC6-202ENST00000273960 CFAP65Q6ZU64 1925 aaKnown RBP15.89■□□□□ 0.13
HERC6-202ENST00000273960 FGD1P98174 961 aa15.88■□□□□ 0.13
HERC6-202ENST00000273960 MORC1Q86VD1 984 aa15.88■□□□□ 0.13
HERC6-202ENST00000273960 COL17A1Q9UMD9 1497 aaPredicted RBP15.88■□□□□ 0.13
HERC6-202ENST00000273960 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
HERC6-202ENST00000273960 K7ELQ4 463 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms