RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
RAB5A-201ENST00000273047 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
RAB5A-201ENST00000273047 NEUROD2Q15784 382 aa26.53■■□□□ 1.84
RAB5A-201ENST00000273047 ARHGAP31Q2M1Z3 1444 aa26.52■■□□□ 1.84
RAB5A-201ENST00000273047 SLC52A1Q9NWF4 448 aa26.51■■□□□ 1.84
RAB5A-201ENST00000273047 ARHGEF28Q8N1W1 1705 aaKnown RBP26.51■■□□□ 1.83
RAB5A-201ENST00000273047 SLFN5Q08AF3 891 aa26.5■■□□□ 1.83
RAB5A-201ENST00000273047 TULP4Q9NRJ4 1543 aa26.5■■□□□ 1.83
RAB5A-201ENST00000273047 DEKP35659 375 aaKnown RBP26.5■■□□□ 1.83
RAB5A-201ENST00000273047 RRP7AQ9Y3A4 280 aaKnown RBP26.5■■□□□ 1.83
RAB5A-201ENST00000273047 EVC2Q86UK5 1308 aa26.5■■□□□ 1.83
RAB5A-201ENST00000273047 PREX1Q8TCU6 1659 aa26.49■■□□□ 1.83
RAB5A-201ENST00000273047 MINK1Q8N4C8 1332 aaPredicted RBP26.49■■□□□ 1.83
RAB5A-201ENST00000273047 MTHFSP49914 203 aa26.47■■□□□ 1.83
RAB5A-201ENST00000273047 SRPK2P78362 688 aaKnown RBP26.47■■□□□ 1.83
RAB5A-201ENST00000273047 STAG3Q9UJ98 1225 aa26.47■■□□□ 1.83
RAB5A-201ENST00000273047 PRAM1Q96QH2 718 aa26.45■■□□□ 1.83
RAB5A-201ENST00000273047 DIP2BQ9P265 1576 aa26.45■■□□□ 1.82
RAB5A-201ENST00000273047 TMEM131LA2VDJ0 1609 aa26.45■■□□□ 1.82
RAB5A-201ENST00000273047 CGNL1Q0VF96 1302 aa26.44■■□□□ 1.82
RAB5A-201ENST00000273047 BCAR3O75815 825 aa26.43■■□□□ 1.82
RAB5A-201ENST00000273047 POLR3AO14802 1390 aaPredicted RBP26.43■■□□□ 1.82
RAB5A-201ENST00000273047 TRMT2AQ8IZ69 625 aaKnown RBP26.4■■□□□ 1.82
RAB5A-201ENST00000273047 POGKQ9P215 609 aa26.4■■□□□ 1.82
RAB5A-201ENST00000273047 NOP58Q9Y2X3 529 aaKnown RBP26.4■■□□□ 1.82
RAB5A-201ENST00000273047 GGNBP2Q9H3C7 697 aa26.39■■□□□ 1.82
RAB5A-201ENST00000273047 WWC1Q8IX03 1113 aa26.38■■□□□ 1.81
RAB5A-201ENST00000273047 SHPRHQ149N8 1683 aa26.38■■□□□ 1.81
RAB5A-201ENST00000273047 ANKRD36BQ8N2N9 1353 aa26.38■■□□□ 1.81
RAB5A-201ENST00000273047 A0A1W2PP64 1363 aa26.37■■□□□ 1.81
RAB5A-201ENST00000273047 TCP11L2Q8N4U5 519 aa26.35■■□□□ 1.81
RAB5A-201ENST00000273047 PAK3O75914 559 aaPredicted RBP26.35■■□□□ 1.81
RAB5A-201ENST00000273047 PTPRMP28827 1452 aa26.35■■□□□ 1.81
RAB5A-201ENST00000273047 ZFYVE9O95405 1425 aa26.34■■□□□ 1.81
RAB5A-201ENST00000273047 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
RAB5A-201ENST00000273047 E9PSI1 815 aa26.34■■□□□ 1.81
RAB5A-201ENST00000273047 WAPLQ7Z5K2 1190 aa26.34■■□□□ 1.81
RAB5A-201ENST00000273047 NKTRP30414 1462 aaKnown RBP26.33■■□□□ 1.81
RAB5A-201ENST00000273047 CLTCQ00610 1675 aaKnown RBP26.33■■□□□ 1.81
RAB5A-201ENST00000273047 NPM2Q86SE8 214 aaKnown RBP26.31■■□□□ 1.8
RAB5A-201ENST00000273047 NBR1Q14596 966 aa26.31■■□□□ 1.8
RAB5A-201ENST00000273047 RUNDC1Q96C34 613 aa26.31■■□□□ 1.8
RAB5A-201ENST00000273047 U2AF1L5P0DN76 240 aaPredicted RBP26.3■■□□□ 1.8
RAB5A-201ENST00000273047 U2AF1Q01081 240 aaKnown RBP eCLIP26.3■■□□□ 1.8
RAB5A-201ENST00000273047 CDK19Q9BWU1 502 aa26.29■■□□□ 1.8
RAB5A-201ENST00000273047 ALKQ9UM73 1620 aa26.29■■□□□ 1.8
RAB5A-201ENST00000273047 FBLN1P23142 703 aa26.28■■□□□ 1.8
RAB5A-201ENST00000273047 CFAP53Q96M91 514 aa26.28■■□□□ 1.8
RAB5A-201ENST00000273047 CABP1Q9NZU7 370 aa26.27■■□□□ 1.8
RAB5A-201ENST00000273047 TCERG1O14776 1098 aaKnown RBP26.27■■□□□ 1.8
RAB5A-201ENST00000273047 PDE4AP27815 886 aa26.27■■□□□ 1.8
RAB5A-201ENST00000273047 PUS7Q96PZ0 661 aaKnown RBP26.27■■□□□ 1.8
RAB5A-201ENST00000273047 USP32Q8NFA0 1604 aa26.26■■□□□ 1.79
RAB5A-201ENST00000273047 FYB1O15117 783 aa26.26■■□□□ 1.79
RAB5A-201ENST00000273047 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.26■■□□□ 1.79
RAB5A-201ENST00000273047 U2SURPO15042 1029 aaKnown RBP26.25■■□□□ 1.79
RAB5A-201ENST00000273047 BCL2L13Q9BXK5 485 aa26.24■■□□□ 1.79
RAB5A-201ENST00000273047 ABCC11Q96J66 1382 aa26.23■■□□□ 1.79
RAB5A-201ENST00000273047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.23■■□□□ 1.79
RAB5A-201ENST00000273047 FRAT1Q92837 279 aaPredicted RBP26.23■■□□□ 1.79
RAB5A-201ENST00000273047 CD163L1Q9NR16 1453 aa26.22■■□□□ 1.79
RAB5A-201ENST00000273047 KDM2BQ8NHM5 1336 aa26.22■■□□□ 1.79
RAB5A-201ENST00000273047 A2ML1A8K2U0 1454 aa26.22■■□□□ 1.79
RAB5A-201ENST00000273047 ANP32AP39687 249 aaKnown RBP26.22■■□□□ 1.79
RAB5A-201ENST00000273047 PANK1Q8TE04 598 aa26.21■■□□□ 1.79
RAB5A-201ENST00000273047 TERF2IPQ9NYB0 399 aa26.21■■□□□ 1.79
RAB5A-201ENST00000273047 IQSEC2Q5JU85 1478 aa26.2■■□□□ 1.78
RAB5A-201ENST00000273047 RIMS2Q9UQ26 1411 aa26.2■■□□□ 1.78
RAB5A-201ENST00000273047 BACH2Q9BYV9 841 aa26.19■■□□□ 1.78
RAB5A-201ENST00000273047 TNNQ9UQP3 1299 aa26.19■■□□□ 1.78
RAB5A-201ENST00000273047 ATAD2Q6PL18 1390 aa26.18■■□□□ 1.78
RAB5A-201ENST00000273047 CANXP27824 592 aaKnown RBP26.18■■□□□ 1.78
RAB5A-201ENST00000273047 NSD2O96028 1365 aa26.18■■□□□ 1.78
RAB5A-201ENST00000273047 IPO9Q96P70 1041 aaKnown RBP26.18■■□□□ 1.78
RAB5A-201ENST00000273047 COG6Q9Y2V7 657 aa26.17■■□□□ 1.78
RAB5A-201ENST00000273047 PPM1GO15355 546 aaPredicted RBP26.17■■□□□ 1.78
RAB5A-201ENST00000273047 AGLP35573 1532 aa26.16■■□□□ 1.78
RAB5A-201ENST00000273047 ESF1Q9H501 851 aaKnown RBP26.16■■□□□ 1.78
RAB5A-201ENST00000273047 NCKAP5LQ9HCH0 1330 aa26.16■■□□□ 1.78
RAB5A-201ENST00000273047 TXNDC2Q86VQ3 553 aa26.16■■□□□ 1.78
RAB5A-201ENST00000273047 PHF23Q9BUL5 403 aaPredicted RBP26.16■■□□□ 1.78
RAB5A-201ENST00000273047 NGEFQ8N5V2 710 aa26.15■■□□□ 1.78
RAB5A-201ENST00000273047 ARHGEF40Q8TER5 1519 aa26.15■■□□□ 1.78
RAB5A-201ENST00000273047 HDGFL2Q7Z4V5 671 aaPredicted RBP26.14■■□□□ 1.78
RAB5A-201ENST00000273047 CENPQQ7L2Z9 268 aaPredicted RBP26.14■■□□□ 1.77
RAB5A-201ENST00000273047 TSR2Q969E8 191 aaKnown RBP26.14■■□□□ 1.77
RAB5A-201ENST00000273047 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
RAB5A-201ENST00000273047 RGS3P49796 1198 aa26.13■■□□□ 1.77
RAB5A-201ENST00000273047 SPATA31D1Q6ZQQ2 1576 aa26.13■■□□□ 1.77
RAB5A-201ENST00000273047 METP08581 1390 aa26.13■■□□□ 1.77
RAB5A-201ENST00000273047 KIF13AQ9H1H9 1805 aa26.13■■□□□ 1.77
RAB5A-201ENST00000273047 RARSP54136 660 aaKnown RBP26.13■■□□□ 1.77
RAB5A-201ENST00000273047 NINLQ9Y2I6 1382 aa26.12■■□□□ 1.77
RAB5A-201ENST00000273047 NLRP1Q9C000 1473 aa26.12■■□□□ 1.77
RAB5A-201ENST00000273047 REREQ9P2R6 1566 aa26.12■■□□□ 1.77
RAB5A-201ENST00000273047 MS4A1P11836 297 aa26.12■■□□□ 1.77
RAB5A-201ENST00000273047 PPP6R1Q9UPN7 881 aa26.12■■□□□ 1.77
RAB5A-201ENST00000273047 IGHDP01880 384 aa26.11■■□□□ 1.77
RAB5A-201ENST00000273047 PLPPR3Q6T4P5 718 aa26.11■■□□□ 1.77
RAB5A-201ENST00000273047 CLUAP1Q96AJ1 413 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms