RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 HDGFP51858 240 aaKnown RBP18.88■□□□□ 0.61
UBR3-201ENST00000272793 IPO4Q8TEX9 1081 aaKnown RBP18.88■□□□□ 0.61
UBR3-201ENST00000272793 FAM177A1Q8N128 213 aaPredicted RBP18.87■□□□□ 0.61
UBR3-201ENST00000272793 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
UBR3-201ENST00000272793 FOXD1Q16676 465 aa18.87■□□□□ 0.61
UBR3-201ENST00000272793 FAM161AQ3B820 660 aa18.86■□□□□ 0.61
UBR3-201ENST00000272793 CENPJQ9HC77 1338 aaPredicted RBP18.86■□□□□ 0.61
UBR3-201ENST00000272793 TNNT1P13805 278 aa18.86■□□□□ 0.61
UBR3-201ENST00000272793 RUFY2Q8WXA3 655 aa18.86■□□□□ 0.61
UBR3-201ENST00000272793 CCDC39Q9UFE4 941 aa18.86■□□□□ 0.61
UBR3-201ENST00000272793 SMC1AQ14683 1233 aaKnown RBP18.85■□□□□ 0.61
UBR3-201ENST00000272793 FEZ1Q99689 392 aa18.85■□□□□ 0.61
UBR3-201ENST00000272793 LTV1Q96GA3 475 aaPredicted RBP18.85■□□□□ 0.61
UBR3-201ENST00000272793 CCDC113Q9H0I3 377 aa18.85■□□□□ 0.61
UBR3-201ENST00000272793 ZNHIT6Q9NWK9 470 aaKnown RBP18.85■□□□□ 0.61
UBR3-201ENST00000272793 SPC24Q8NBT2 197 aa18.85■□□□□ 0.61
UBR3-201ENST00000272793 TRIM5Q9C035 493 aa18.85■□□□□ 0.61
UBR3-201ENST00000272793 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
UBR3-201ENST00000272793 MATR3P43243 847 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■■□□ 16.9
UBR3-201ENST00000272793 SDF4Q9BRK5 362 aa18.84■□□□□ 0.61
UBR3-201ENST00000272793 NASPP49321 788 aaPredicted RBP18.84■□□□□ 0.61
UBR3-201ENST00000272793 TIGD1Q96MW7 591 aa18.84■□□□□ 0.61
UBR3-201ENST00000272793 SMC3Q9UQE7 1217 aa18.84■□□□□ 0.61
UBR3-201ENST00000272793 CLGNO14967 610 aa18.84■□□□□ 0.61
UBR3-201ENST00000272793 SSR1P43307 286 aaKnown RBP18.83■□□□□ 0.61
UBR3-201ENST00000272793 RNF214Q8ND24 703 aa18.83■□□□□ 0.61
UBR3-201ENST00000272793 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.61
UBR3-201ENST00000272793 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.61
UBR3-201ENST00000272793 DESP17661 470 aa18.83■□□□□ 0.61
UBR3-201ENST00000272793 CCP110O43303 1012 aa18.83■□□□□ 0.6
UBR3-201ENST00000272793 KRT18P05783 430 aaKnown RBP18.83■□□□□ 0.6
UBR3-201ENST00000272793 DAAM2Q86T65 1068 aa18.82■□□□□ 0.6
UBR3-201ENST00000272793 LUC7LQ9NQ29 371 aaKnown RBP18.82■□□□□ 0.6
UBR3-201ENST00000272793 UBE4AQ14139 1066 aa18.82■□□□□ 0.6
UBR3-201ENST00000272793 FMNL2Q96PY5 1086 aa18.82■□□□□ 0.6
UBR3-201ENST00000272793 TMCO5BA8MYB1 307 aa18.82■□□□□ 0.6
UBR3-201ENST00000272793 XBP1P17861 261 aa18.82■□□□□ 0.6
UBR3-201ENST00000272793 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
UBR3-201ENST00000272793 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
UBR3-201ENST00000272793 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
UBR3-201ENST00000272793 RNF20Q5VTR2 975 aa18.81■□□□□ 0.6
UBR3-201ENST00000272793 EVA1CP58658 441 aa18.79■□□□□ 0.6
UBR3-201ENST00000272793 C9orf78Q9NZ63 289 aaPredicted RBP18.79■□□□□ 0.6
UBR3-201ENST00000272793 CCDC102AQ96A19 550 aa18.79■□□□□ 0.6
UBR3-201ENST00000272793 CFAP65Q6ZU64 1925 aaKnown RBP18.79■□□□□ 0.6
UBR3-201ENST00000272793 ZHX3Q9H4I2 956 aa18.79■□□□□ 0.6
UBR3-201ENST00000272793 DDX11Q96FC9 970 aa18.78■□□□□ 0.6
UBR3-201ENST00000272793 TXLNAP40222 546 aa18.77■□□□□ 0.6
UBR3-201ENST00000272793 CCDC160A6NGH7 325 aa18.77■□□□□ 0.6
UBR3-201ENST00000272793 COMMD10Q9Y6G5 202 aa18.77■□□□□ 0.6
UBR3-201ENST00000272793 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
UBR3-201ENST00000272793 EIF3AQ14152 1382 aaKnown RBP18.77■□□□□ 0.6
UBR3-201ENST00000272793 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
UBR3-201ENST00000272793 ERLIN1O75477 346 aa18.77■□□□□ 0.6
UBR3-201ENST00000272793 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.59
UBR3-201ENST00000272793 CBX1P83916 185 aa18.76■□□□□ 0.59
UBR3-201ENST00000272793 HOMER2Q9NSB8 354 aa18.76■□□□□ 0.59
UBR3-201ENST00000272793 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
UBR3-201ENST00000272793 VGFO15240 615 aaPredicted RBP18.76■□□□□ 0.59
UBR3-201ENST00000272793 REC8O95072 547 aa18.76■□□□□ 0.59
UBR3-201ENST00000272793 AMPHP49418 695 aa18.76■□□□□ 0.59
UBR3-201ENST00000272793 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
UBR3-201ENST00000272793 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
UBR3-201ENST00000272793 TTC16Q8NEE8 873 aa18.76■□□□□ 0.59
UBR3-201ENST00000272793 BRPF3Q9ULD4 1205 aa18.76■□□□□ 0.59
UBR3-201ENST00000272793 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
UBR3-201ENST00000272793 IL27Q8NEV9 243 aa18.75■□□□□ 0.59
UBR3-201ENST00000272793 RALYLQ86SE5 291 aaKnown RBP18.75■□□□□ 0.59
UBR3-201ENST00000272793 CRBNQ96SW2 442 aa18.75■□□□□ 0.59
UBR3-201ENST00000272793 GOPCQ9HD26 462 aa18.75■□□□□ 0.59
UBR3-201ENST00000272793 TMCO3Q6UWJ1 677 aa18.75■□□□□ 0.59
UBR3-201ENST00000272793 IFIT2P09913 472 aaKnown RBP18.74■□□□□ 0.59
UBR3-201ENST00000272793 IQCEQ6IPM2 695 aa18.74■□□□□ 0.59
UBR3-201ENST00000272793 KANK1Q14678 1352 aa18.74■□□□□ 0.59
UBR3-201ENST00000272793 SPDYE4A6NLX3 237 aa18.74■□□□□ 0.59
UBR3-201ENST00000272793 MPNDQ8N594 471 aa18.74■□□□□ 0.59
UBR3-201ENST00000272793 EXOC6Q8TAG9 804 aa18.73■□□□□ 0.59
UBR3-201ENST00000272793 SERPINC1P01008 464 aa18.73■□□□□ 0.59
UBR3-201ENST00000272793 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
UBR3-201ENST00000272793 KINO60870 393 aaKnown RBP18.73■□□□□ 0.59
UBR3-201ENST00000272793 TRIM21P19474 475 aaKnown RBP18.72■□□□□ 0.59
UBR3-201ENST00000272793 FLIIQ13045 1269 aa18.72■□□□□ 0.59
UBR3-201ENST00000272793 PPFIBP1Q86W92 1011 aa18.72■□□□□ 0.59
UBR3-201ENST00000272793 C1orf141Q5JVX7 400 aa18.71■□□□□ 0.59
UBR3-201ENST00000272793 SHTN1A0MZ66 631 aa18.71■□□□□ 0.59
UBR3-201ENST00000272793 NAP1L3Q99457 506 aaPredicted RBP18.71■□□□□ 0.59
UBR3-201ENST00000272793 TXLNBQ8N3L3 684 aa18.7■□□□□ 0.58
UBR3-201ENST00000272793 GON4LQ3T8J9 2241 aa18.7■□□□□ 0.58
UBR3-201ENST00000272793 SEPT6Q14141 434 aa18.7■□□□□ 0.58
UBR3-201ENST00000272793 RNF187Q5TA31 235 aaPredicted RBP18.7■□□□□ 0.58
UBR3-201ENST00000272793 NECTIN2Q92692 538 aa18.7■□□□□ 0.58
UBR3-201ENST00000272793 ATP2B1P20020 1258 aa18.7■□□□□ 0.58
UBR3-201ENST00000272793 NFKBIBQ15653 356 aa18.7■□□□□ 0.58
UBR3-201ENST00000272793 FAM184BQ9ULE4 1060 aa18.7■□□□□ 0.58
UBR3-201ENST00000272793 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
UBR3-201ENST00000272793 TTC36A6NLP5 189 aa18.69■□□□□ 0.58
UBR3-201ENST00000272793 COG6Q9Y2V7 657 aa18.69■□□□□ 0.58
UBR3-201ENST00000272793 JAKMIP3Q5VZ66 844 aa18.69■□□□□ 0.58
UBR3-201ENST00000272793 ATP2B2Q01814 1243 aa18.69■□□□□ 0.58
UBR3-201ENST00000272793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.69■□□□□ 0.583e-7■■■■□ 23.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms