RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 SASS6Q6UVJ0 657 aa12.38□□□□□ -0.43
LAMA3-201ENST00000269217 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
LAMA3-201ENST00000269217 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
LAMA3-201ENST00000269217 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
LAMA3-201ENST00000269217 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
LAMA3-201ENST00000269217 EHBP1L1Q8N3D4 1523 aa12.38□□□□□ -0.43
LAMA3-201ENST00000269217 CFTRP13569 1480 aa12.37□□□□□ -0.43
LAMA3-201ENST00000269217 FAM43AQ8N2R8 423 aa12.37□□□□□ -0.43
LAMA3-201ENST00000269217 NINLQ9Y2I6 1382 aa12.37□□□□□ -0.43
LAMA3-201ENST00000269217 IPO7O95373 1038 aaKnown RBP12.37□□□□□ -0.43
LAMA3-201ENST00000269217 UBTFL1P0CB47 393 aaPredicted RBP12.37□□□□□ -0.43
LAMA3-201ENST00000269217 CCDC73Q6ZRK6 1079 aa12.37□□□□□ -0.43
LAMA3-201ENST00000269217 AQRO60306 1485 aaKnown RBP eCLIP12.37□□□□□ -0.43
LAMA3-201ENST00000269217 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
LAMA3-201ENST00000269217 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
LAMA3-201ENST00000269217 GNAI3P08754 354 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
LAMA3-201ENST00000269217 PDE4CQ08493 712 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 CFAP70Q5T0N1 1121 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 HOMER1Q86YM7 354 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 PDZRN3Q9UPQ7 1066 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 NFXL1Q6ZNB6 911 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 RAPGEF4Q8WZA2 1011 aa12.35□□□□□ -0.43
LAMA3-201ENST00000269217 ERICH2A1L162 156 aa12.34□□□□□ -0.43
LAMA3-201ENST00000269217 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
LAMA3-201ENST00000269217 CYB5RLQ6IPT4 315 aa12.34□□□□□ -0.43
LAMA3-201ENST00000269217 RIC3Q7Z5B4 369 aa12.34□□□□□ -0.43
LAMA3-201ENST00000269217 PSMA5P28066 241 aa12.34□□□□□ -0.43
LAMA3-201ENST00000269217 GCC1Q96CN9 775 aa12.34□□□□□ -0.43
LAMA3-201ENST00000269217 NASPP49321 788 aaPredicted RBP12.34□□□□□ -0.43
LAMA3-201ENST00000269217 EXOSC9Q06265 439 aaKnown RBP12.33□□□□□ -0.43
LAMA3-201ENST00000269217 MCM2P49736 904 aa12.33□□□□□ -0.44
LAMA3-201ENST00000269217 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
LAMA3-201ENST00000269217 CCDC30Q5VVM6 783 aa12.33□□□□□ -0.44
LAMA3-201ENST00000269217 PCMTD1Q96MG8 357 aaPredicted RBP12.33□□□□□ -0.44
LAMA3-201ENST00000269217 FAM13BQ9NYF5 915 aa12.33□□□□□ -0.44
LAMA3-201ENST00000269217 CCDC39Q9UFE4 941 aa12.33□□□□□ -0.44
LAMA3-201ENST00000269217 TRAK2O60296 914 aa12.33□□□□□ -0.44
LAMA3-201ENST00000269217 RALYLQ86SE5 291 aaKnown RBP12.33□□□□□ -0.44
LAMA3-201ENST00000269217 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
LAMA3-201ENST00000269217 MBD3O95983 291 aa12.32□□□□□ -0.44
LAMA3-201ENST00000269217 VPS37DQ86XT2 251 aa12.32□□□□□ -0.44
LAMA3-201ENST00000269217 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
LAMA3-201ENST00000269217 SMG6Q86US8 1419 aaKnown RBP12.32□□□□□ -0.44
LAMA3-201ENST00000269217 RABEP1Q15276 862 aa12.32□□□□□ -0.44
LAMA3-201ENST00000269217 C9orf84Q5VXU9 1444 aa12.32□□□□□ -0.44
LAMA3-201ENST00000269217 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
LAMA3-201ENST00000269217 CLASRPQ8N2M8 674 aaKnown RBP12.32□□□□□ -0.44
LAMA3-201ENST00000269217 PNISRQ8TF01 805 aaKnown RBP12.32□□□□□ -0.44
LAMA3-201ENST00000269217 AKNAQ7Z591 1439 aa12.32□□□□□ -0.44
LAMA3-201ENST00000269217 LETM1O95202 739 aaPredicted RBP12.31□□□□□ -0.44
LAMA3-201ENST00000269217 CT47B1P0C2W7 299 aaPredicted RBP12.31□□□□□ -0.44
LAMA3-201ENST00000269217 SETQ01105 290 aaPredicted RBP12.31□□□□□ -0.44
LAMA3-201ENST00000269217 NBPF1Q3BBV0 1214 aa12.31□□□□□ -0.44
LAMA3-201ENST00000269217 NBPF8Q3BBV2 869 aa12.31□□□□□ -0.44
LAMA3-201ENST00000269217 ZNF771Q7L3S4 317 aaPredicted RBP12.31□□□□□ -0.44
LAMA3-201ENST00000269217 PRXQ9BXM0 1461 aa12.31□□□□□ -0.44
LAMA3-201ENST00000269217 TIAM1Q13009 1591 aa12.31□□□□□ -0.44
LAMA3-201ENST00000269217 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
LAMA3-201ENST00000269217 NEUROD6Q96NK8 337 aa12.31□□□□□ -0.44
LAMA3-201ENST00000269217 IFT57Q9NWB7 429 aa12.31□□□□□ -0.44
LAMA3-201ENST00000269217 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
LAMA3-201ENST00000269217 NAT10Q9H0A0 1025 aaKnown RBP12.31□□□□□ -0.44
LAMA3-201ENST00000269217 PLEKHH2Q8IVE3 1493 aa12.3□□□□□ -0.44
LAMA3-201ENST00000269217 AFAP1Q8N556 730 aa12.3□□□□□ -0.44
LAMA3-201ENST00000269217 NLRP6P59044 892 aa12.3□□□□□ -0.44
LAMA3-201ENST00000269217 SURF6O75683 361 aaKnown RBP12.3□□□□□ -0.44
LAMA3-201ENST00000269217 AIMP1Q12904 312 aaKnown RBP12.3□□□□□ -0.44
LAMA3-201ENST00000269217 WDR63Q8IWG1 891 aa12.29□□□□□ -0.44
LAMA3-201ENST00000269217 FSD1Q9BTV5 496 aa12.29□□□□□ -0.44
LAMA3-201ENST00000269217 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
LAMA3-201ENST00000269217 BACH2Q9BYV9 841 aa12.29□□□□□ -0.44
LAMA3-201ENST00000269217 HIP1O00291 1037 aa12.29□□□□□ -0.44
LAMA3-201ENST00000269217 WASHC4Q2M389 1173 aa12.29□□□□□ -0.44
LAMA3-201ENST00000269217 NEK4P51957 841 aa12.29□□□□□ -0.44
LAMA3-201ENST00000269217 HECW1Q76N89 1606 aa12.29□□□□□ -0.44
LAMA3-201ENST00000269217 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
LAMA3-201ENST00000269217 FOSBP53539 338 aa12.28□□□□□ -0.44
LAMA3-201ENST00000269217 FAM69CQ0P6D2 419 aa12.28□□□□□ -0.44
LAMA3-201ENST00000269217 ARGLU1Q9NWB6 273 aaPredicted RBP12.28□□□□□ -0.44
LAMA3-201ENST00000269217 NOB1Q9ULX3 412 aaKnown RBP12.28□□□□□ -0.44
LAMA3-201ENST00000269217 DHX16O60231 1041 aaKnown RBP12.28□□□□□ -0.44
LAMA3-201ENST00000269217 BCAR3O75815 825 aa12.28□□□□□ -0.44
LAMA3-201ENST00000269217 PDCP20941 246 aa12.28□□□□□ -0.44
LAMA3-201ENST00000269217 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
LAMA3-201ENST00000269217 TOP2BQ02880 1626 aa12.28□□□□□ -0.44
LAMA3-201ENST00000269217 CAVIN1Q6NZI2 390 aaKnown RBP12.28□□□□□ -0.44
LAMA3-201ENST00000269217 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
LAMA3-201ENST00000269217 GNAI2P04899 355 aa12.28□□□□□ -0.44
LAMA3-201ENST00000269217 MNS1Q8NEH6 495 aa12.28□□□□□ -0.44
LAMA3-201ENST00000269217 FBXW7Q969H0 707 aa12.27□□□□□ -0.44
LAMA3-201ENST00000269217 TROQ12816 1431 aaPredicted RBP12.27□□□□□ -0.44
LAMA3-201ENST00000269217 OLFM4Q6UX06 510 aa12.27□□□□□ -0.44
LAMA3-201ENST00000269217 ERC1Q8IUD2 1116 aa12.27□□□□□ -0.44
LAMA3-201ENST00000269217 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.44
LAMA3-201ENST00000269217 SDF4Q9BRK5 362 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms