RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 INTS3Q68E01 1043 aaKnown RBP9.58□□□□□ -0.88
CLTC-201ENST00000269122 PDCL2Q8N4E4 241 aa9.58□□□□□ -0.88
CLTC-201ENST00000269122 HNRNPMP52272 730 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLTC-201ENST00000269122 STK3Q13188 491 aa9.58□□□□□ -0.88
CLTC-201ENST00000269122 TMX4Q9H1E5 349 aaPredicted RBP9.58□□□□□ -0.88
CLTC-201ENST00000269122 ATP2B1P20020 1258 aa9.57□□□□□ -0.88
CLTC-201ENST00000269122 ZFYVE27Q5T4F4 411 aa9.57□□□□□ -0.88
CLTC-201ENST00000269122 KIF27Q86VH2 1401 aa9.57□□□□□ -0.88
CLTC-201ENST00000269122 HSP90AB2PQ58FF8 381 aa9.57□□□□□ -0.88
CLTC-201ENST00000269122 CCDC73Q6ZRK6 1079 aa9.57□□□□□ -0.88
CLTC-201ENST00000269122 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
CLTC-201ENST00000269122 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLTC-201ENST00000269122 VPS8Q8N3P4 1428 aa9.57□□□□□ -0.88
CLTC-201ENST00000269122 ZKSCAN1P17029 563 aaPredicted RBP9.57□□□□□ -0.88
CLTC-201ENST00000269122 SYCE3A1L190 88 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 NEK4P51957 841 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 CCDC112Q8NEF3 446 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
CLTC-201ENST00000269122 ANKRD20A12PQ8NF67 263 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 FYB1O15117 783 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 GTF2E1P29083 439 aaPredicted RBP9.56□□□□□ -0.88
CLTC-201ENST00000269122 PPP4R3BQ5MIZ7 849 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 SYTL4Q96C24 671 aaPredicted RBP9.56□□□□□ -0.88
CLTC-201ENST00000269122 OLFM4Q6UX06 510 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 DEF6Q9H4E7 631 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 CCDC102AQ96A19 550 aa9.56□□□□□ -0.88
CLTC-201ENST00000269122 DDX19BQ9UMR2 479 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 IGSF3O75054 1194 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 KIAA0754O94854 1291 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 CAMK4Q16566 473 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 BACH2Q9BYV9 841 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 IFIT2P09913 472 aaKnown RBP9.55□□□□□ -0.88
CLTC-201ENST00000269122 BCAR3O75815 825 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 HMOX1P09601 288 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 CDR1P51861 262 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 C9orf78Q9NZ63 289 aaPredicted RBP9.55□□□□□ -0.88
CLTC-201ENST00000269122 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 AMPHP49418 695 aa9.55□□□□□ -0.88
CLTC-201ENST00000269122 RIPK4P57078 832 aa9.54□□□□□ -0.88
CLTC-201ENST00000269122 SYNE3Q6ZMZ3 975 aa9.54□□□□□ -0.88
CLTC-201ENST00000269122 ODF2Q5BJF6 829 aa9.54□□□□□ -0.88
CLTC-201ENST00000269122 TAX1BP1Q86VP1 789 aa9.54□□□□□ -0.88
CLTC-201ENST00000269122 TAF3Q5VWG9 929 aa9.54□□□□□ -0.88
CLTC-201ENST00000269122 DNAJC2Q99543 621 aaKnown RBP9.54□□□□□ -0.88
CLTC-201ENST00000269122 DHX16O60231 1041 aaKnown RBP9.54□□□□□ -0.88
CLTC-201ENST00000269122 NAT10Q9H0A0 1025 aaKnown RBP9.54□□□□□ -0.88
CLTC-201ENST00000269122 USP47Q96K76 1375 aa9.54□□□□□ -0.88
CLTC-201ENST00000269122 CT47A1Q5JQC4 288 aaPredicted RBP9.53□□□□□ -0.88
CLTC-201ENST00000269122 EPS15P42566 896 aa9.53□□□□□ -0.88
CLTC-201ENST00000269122 HMGN5P82970 282 aaKnown RBP9.53□□□□□ -0.88
CLTC-201ENST00000269122 SERPINC1P01008 464 aa9.53□□□□□ -0.88
CLTC-201ENST00000269122 HOOK1Q9UJC3 728 aaKnown RBP9.53□□□□□ -0.88
CLTC-201ENST00000269122 ANKRD62A6NC57 917 aa9.53□□□□□ -0.88
CLTC-201ENST00000269122 FILIP1Q7Z7B0 1213 aa9.53□□□□□ -0.88
CLTC-201ENST00000269122 KIF3BO15066 747 aa9.53□□□□□ -0.88
CLTC-201ENST00000269122 GTF2F1P35269 517 aaKnown RBP eCLIP9.53□□□□□ -0.881e-9■■■□□ 18.6
CLTC-201ENST00000269122 ENOX2Q16206 610 aaKnown RBP9.53□□□□□ -0.88
CLTC-201ENST00000269122 DCTN1Q14203 1278 aa9.53□□□□□ -0.88
CLTC-201ENST00000269122 CCDC88BA6NC98 1476 aa9.52□□□□□ -0.88
CLTC-201ENST00000269122 EVA1CP58658 441 aa9.52□□□□□ -0.89
CLTC-201ENST00000269122 CCDC184Q52MB2 194 aa9.52□□□□□ -0.89
CLTC-201ENST00000269122 HDGFP51858 240 aaKnown RBP9.52□□□□□ -0.89
CLTC-201ENST00000269122 GIMAP7Q8NHV1 300 aa9.52□□□□□ -0.89
CLTC-201ENST00000269122 RUFY2Q8WXA3 655 aa9.52□□□□□ -0.89
CLTC-201ENST00000269122 PHF23Q9BUL5 403 aaPredicted RBP9.52□□□□□ -0.89
CLTC-201ENST00000269122 FHAD1B1AJZ9 1412 aa9.52□□□□□ -0.89
CLTC-201ENST00000269122 FAM177BA6PVY3 158 aa9.52□□□□□ -0.89
CLTC-201ENST00000269122 NEFHP12036 1026 aa9.51□□□□□ -0.89
CLTC-201ENST00000269122 MCM4P33991 863 aa9.51□□□□□ -0.89
CLTC-201ENST00000269122 DYDC1Q8WWB3 177 aa9.51□□□□□ -0.89
CLTC-201ENST00000269122 CHMP4CQ96CF2 233 aa9.51□□□□□ -0.89
CLTC-201ENST00000269122 TNMDQ9H2S6 317 aa9.51□□□□□ -0.89
CLTC-201ENST00000269122 LRRFIP2Q9Y608 721 aaKnown RBP9.51□□□□□ -0.89
CLTC-201ENST00000269122 CUX2O14529 1486 aa9.51□□□□□ -0.89
CLTC-201ENST00000269122 PHLDB1Q86UU1 1377 aa9.51□□□□□ -0.89
CLTC-201ENST00000269122 TRMT1Q9NXH9 659 aaKnown RBP9.51□□□□□ -0.89
CLTC-201ENST00000269122 KINO60870 393 aaKnown RBP9.51□□□□□ -0.89
CLTC-201ENST00000269122 FKBP5Q13451 457 aaPredicted RBP9.51□□□□□ -0.89
CLTC-201ENST00000269122 ERCC4Q92889 916 aaPredicted RBP9.51□□□□□ -0.89
CLTC-201ENST00000269122 CDC45O75419 566 aa9.5□□□□□ -0.89
CLTC-201ENST00000269122 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
CLTC-201ENST00000269122 RSPH4AQ5TD94 716 aa9.5□□□□□ -0.89
CLTC-201ENST00000269122 ADAMTS8Q9UP79 889 aa9.5□□□□□ -0.89
CLTC-201ENST00000269122 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.5□□□□□ -0.89
CLTC-201ENST00000269122 ZNF830Q96NB3 372 aaPredicted RBP9.5□□□□□ -0.89
CLTC-201ENST00000269122 VGLL3A8MV65 326 aa9.5□□□□□ -0.89
CLTC-201ENST00000269122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.5□□□□□ -0.893e-6■■■■■ 33.4
CLTC-201ENST00000269122 OFD1O75665 1012 aa9.5□□□□□ -0.89
CLTC-201ENST00000269122 AIMP1Q12904 312 aaKnown RBP9.49□□□□□ -0.89
CLTC-201ENST00000269122 C16orf45Q96MC5 204 aaPredicted RBP9.49□□□□□ -0.89
CLTC-201ENST00000269122 FMN1Q68DA7 1419 aa9.49□□□□□ -0.89
CLTC-201ENST00000269122 LRRCC1Q9C099 1032 aa9.49□□□□□ -0.89
CLTC-201ENST00000269122 PDCL3Q9H2J4 239 aa9.49□□□□□ -0.89
CLTC-201ENST00000269122 NUTM2GQ5VZR2 741 aa9.49□□□□□ -0.89
CLTC-201ENST00000269122 EIF3AQ14152 1382 aaKnown RBP9.49□□□□□ -0.89
CLTC-201ENST00000269122 NEUROD6Q96NK8 337 aa9.49□□□□□ -0.89
CLTC-201ENST00000269122 TCEAL9Q9UHQ7 104 aa9.49□□□□□ -0.89
CLTC-201ENST00000269122 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
CLTC-201ENST00000269122 LARP6Q9BRS8 491 aaKnown RBP9.48□□□□□ -0.89
CLTC-201ENST00000269122 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms