RNA–Protein interactions for RNA: ENST00000266943.10

SLC46A3-201, Transcript of solute carrier family 46 member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC46A3, Length 3,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A3-201ENST00000266943 SLIT1O75093 1534 aa19.3■□□□□ 0.68
SLC46A3-201ENST00000266943 WAPLQ7Z5K2 1190 aa19.29■□□□□ 0.68
SLC46A3-201ENST00000266943 ARHGAP23Q9P227 1491 aa19.29■□□□□ 0.68
SLC46A3-201ENST00000266943 NPC1L1Q9UHC9 1359 aa19.28■□□□□ 0.68
SLC46A3-201ENST00000266943 NSD3Q9BZ95 1437 aa19.28■□□□□ 0.68
SLC46A3-201ENST00000266943 ABCC11Q96J66 1382 aa19.27■□□□□ 0.68
SLC46A3-201ENST00000266943 PLEKHG1Q9ULL1 1385 aa19.27■□□□□ 0.67
SLC46A3-201ENST00000266943 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
SLC46A3-201ENST00000266943 SENP3-EIF4A1A0A087X0R7 540 aa19.26■□□□□ 0.67
SLC46A3-201ENST00000266943 CEP170BQ9Y4F5 1589 aaPredicted RBP19.26■□□□□ 0.67
SLC46A3-201ENST00000266943 BCANQ96GW7 911 aa19.26■□□□□ 0.67
SLC46A3-201ENST00000266943 CPS1P31327 1500 aa19.25■□□□□ 0.67
SLC46A3-201ENST00000266943 PPP2R1AP30153 589 aa19.25■□□□□ 0.67
SLC46A3-201ENST00000266943 USP32Q8NFA0 1604 aa19.25■□□□□ 0.67
SLC46A3-201ENST00000266943 PUS7Q96PZ0 661 aaKnown RBP19.25■□□□□ 0.67
SLC46A3-201ENST00000266943 SRPK2P78362 688 aaKnown RBP19.25■□□□□ 0.67
SLC46A3-201ENST00000266943 TXNDC2Q86VQ3 553 aa19.25■□□□□ 0.67
SLC46A3-201ENST00000266943 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
SLC46A3-201ENST00000266943 TECPR2O15040 1411 aa19.23■□□□□ 0.67
SLC46A3-201ENST00000266943 MED14O60244 1454 aa19.23■□□□□ 0.67
SLC46A3-201ENST00000266943 ANKRD36BQ8N2N9 1353 aa19.23■□□□□ 0.67
SLC46A3-201ENST00000266943 CD163L1Q9NR16 1453 aa19.21■□□□□ 0.67
SLC46A3-201ENST00000266943 CDK19Q9BWU1 502 aa19.21■□□□□ 0.67
SLC46A3-201ENST00000266943 A0A1W2PP64 1363 aa19.21■□□□□ 0.67
SLC46A3-201ENST00000266943 ZNF142P52746 1687 aaPredicted RBP19.21■□□□□ 0.67
SLC46A3-201ENST00000266943 SLC26A8Q96RN1 970 aa19.2■□□□□ 0.66
SLC46A3-201ENST00000266943 PTPRUQ92729 1446 aa19.2■□□□□ 0.66
SLC46A3-201ENST00000266943 ROBO2Q9HCK4 1378 aa19.2■□□□□ 0.66
SLC46A3-201ENST00000266943 ATAD2Q6PL18 1390 aa19.19■□□□□ 0.66
SLC46A3-201ENST00000266943 EID1Q9Y6B2 187 aa19.19■□□□□ 0.66
SLC46A3-201ENST00000266943 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
SLC46A3-201ENST00000266943 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
SLC46A3-201ENST00000266943 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.17■□□□□ 0.66
SLC46A3-201ENST00000266943 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
SLC46A3-201ENST00000266943 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.66
SLC46A3-201ENST00000266943 CGNL1Q0VF96 1302 aa19.13■□□□□ 0.65
SLC46A3-201ENST00000266943 DIP2AQ14689 1571 aa19.13■□□□□ 0.65
SLC46A3-201ENST00000266943 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
SLC46A3-201ENST00000266943 CABP1Q9NZU7 370 aa19.13■□□□□ 0.65
SLC46A3-201ENST00000266943 WASLO00401 505 aaPredicted RBP19.12■□□□□ 0.65
SLC46A3-201ENST00000266943 ADGRB2O60241 1585 aa19.12■□□□□ 0.65
SLC46A3-201ENST00000266943 TNNT2P45379 298 aaPredicted RBP19.12■□□□□ 0.65
SLC46A3-201ENST00000266943 ANKRD26Q9UPS8 1709 aa19.11■□□□□ 0.65
SLC46A3-201ENST00000266943 MORC1Q86VD1 984 aa19.11■□□□□ 0.65
SLC46A3-201ENST00000266943 XRN1Q8IZH2 1706 aaKnown RBP19.11■□□□□ 0.65
SLC46A3-201ENST00000266943 ADAMTS8Q9UP79 889 aa19.1■□□□□ 0.65
SLC46A3-201ENST00000266943 KIF20BQ96Q89 1820 aa19.1■□□□□ 0.65
SLC46A3-201ENST00000266943 NCKAP5LQ9HCH0 1330 aa19.1■□□□□ 0.65
SLC46A3-201ENST00000266943 SUPT16HQ9Y5B9 1047 aaKnown RBP19.09■□□□□ 0.65
SLC46A3-201ENST00000266943 SHPRHQ149N8 1683 aa19.09■□□□□ 0.65
SLC46A3-201ENST00000266943 TBX22Q9Y458 520 aa19.09■□□□□ 0.65
SLC46A3-201ENST00000266943 SETD1BQ9UPS6 1966 aaKnown RBP19.09■□□□□ 0.65
SLC46A3-201ENST00000266943 ATP7BP35670 1465 aa19.08■□□□□ 0.65
SLC46A3-201ENST00000266943 PPIP5K1Q6PFW1 1433 aa19.08■□□□□ 0.64
SLC46A3-201ENST00000266943 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
SLC46A3-201ENST00000266943 AMOTL2Q9Y2J4 779 aa19.08■□□□□ 0.64
SLC46A3-201ENST00000266943 NSD2O96028 1365 aa19.08■□□□□ 0.64
SLC46A3-201ENST00000266943 INSRP06213 1382 aa19.07■□□□□ 0.64
SLC46A3-201ENST00000266943 SALL2Q9Y467 1007 aaPredicted RBP19.07■□□□□ 0.64
SLC46A3-201ENST00000266943 PRR36Q9H6K5 1346 aa19.06■□□□□ 0.64
SLC46A3-201ENST00000266943 TOPAZ1Q8N9V7 1692 aa19.06■□□□□ 0.64
SLC46A3-201ENST00000266943 PTCH1Q13635 1447 aa19.06■□□□□ 0.64
SLC46A3-201ENST00000266943 GGNBP2Q9H3C7 697 aa19.05■□□□□ 0.64
SLC46A3-201ENST00000266943 CDC42BPGQ6DT37 1551 aa19.05■□□□□ 0.64
SLC46A3-201ENST00000266943 AKAP12Q02952 1782 aa19.05■□□□□ 0.64
SLC46A3-201ENST00000266943 MON2Q7Z3U7 1717 aa19.05■□□□□ 0.64
SLC46A3-201ENST00000266943 HDGFL2Q7Z4V5 671 aaPredicted RBP19.05■□□□□ 0.64
SLC46A3-201ENST00000266943 NUDT16Q96DE0 195 aaKnown RBP19.05■□□□□ 0.64
SLC46A3-201ENST00000266943 FYB1O15117 783 aa19.04■□□□□ 0.64
SLC46A3-201ENST00000266943 WDR43Q15061 677 aaKnown RBP eCLIP19.04■□□□□ 0.64
SLC46A3-201ENST00000266943 ITSN1Q15811 1721 aa19.04■□□□□ 0.64
SLC46A3-201ENST00000266943 CPSF1Q10570 1443 aaKnown RBP19.04■□□□□ 0.64
SLC46A3-201ENST00000266943 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
SLC46A3-201ENST00000266943 POLR3AO14802 1390 aaPredicted RBP19.04■□□□□ 0.64
SLC46A3-201ENST00000266943 FKBP8Q14318 412 aa19.03■□□□□ 0.64
SLC46A3-201ENST00000266943 CHD2O14647 1828 aaKnown RBP19.02■□□□□ 0.64
SLC46A3-201ENST00000266943 ANKLE2Q86XL3 938 aa19.01■□□□□ 0.63
SLC46A3-201ENST00000266943 RGPD8O14715 1765 aaPredicted RBP19■□□□□ 0.63
SLC46A3-201ENST00000266943 MTHFSP49914 203 aa19■□□□□ 0.63
SLC46A3-201ENST00000266943 NUTM2FA1L443 756 aa19■□□□□ 0.63
SLC46A3-201ENST00000266943 KCNA6P17658 529 aa19■□□□□ 0.63
SLC46A3-201ENST00000266943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
SLC46A3-201ENST00000266943 NKTRP30414 1462 aaKnown RBP19■□□□□ 0.63
SLC46A3-201ENST00000266943 NUDCQ9Y266 331 aa18.99■□□□□ 0.63
SLC46A3-201ENST00000266943 CCDC61Q9Y6R9 512 aa18.99■□□□□ 0.63
SLC46A3-201ENST00000266943 CCDC146Q8IYE0 955 aa18.99■□□□□ 0.63
SLC46A3-201ENST00000266943 NRKQ7Z2Y5 1582 aa18.98■□□□□ 0.63
SLC46A3-201ENST00000266943 EDC4Q6P2E9 1401 aaKnown RBP18.97■□□□□ 0.63
SLC46A3-201ENST00000266943 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
SLC46A3-201ENST00000266943 NALCNQ8IZF0 1738 aa18.96■□□□□ 0.63
SLC46A3-201ENST00000266943 IRX6P78412 446 aaPredicted RBP18.95■□□□□ 0.62
SLC46A3-201ENST00000266943 CDCA7LQ96GN5 454 aa18.95■□□□□ 0.62
SLC46A3-201ENST00000266943 COL3A1P02461 1466 aaPredicted RBP18.94■□□□□ 0.62
SLC46A3-201ENST00000266943 NEFLP07196 543 aa18.94■□□□□ 0.62
SLC46A3-201ENST00000266943 NPHP4O75161 1426 aaPredicted RBP18.94■□□□□ 0.62
SLC46A3-201ENST00000266943 NME9Q86XW9 330 aa18.93■□□□□ 0.62
SLC46A3-201ENST00000266943 ZRANB1Q9UGI0 708 aa18.93■□□□□ 0.62
SLC46A3-201ENST00000266943 FBLN1P23142 703 aa18.93■□□□□ 0.62
SLC46A3-201ENST00000266943 FMN2Q9NZ56 1722 aa18.93■□□□□ 0.62
SLC46A3-201ENST00000266943 MAP2P11137 1827 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms