RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 ATF3P18847 181 aa23.35■■□□□ 1.33
SNRPF-201ENST00000266735 SAFB2Q14151 953 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNRPF-201ENST00000266735 CADPS2Q86UW7 1296 aa23.35■■□□□ 1.33
SNRPF-201ENST00000266735 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.33
SNRPF-201ENST00000266735 XIRP1Q702N8 1843 aaKnown RBP23.33■■□□□ 1.32
SNRPF-201ENST00000266735 UBAP1LF5GYI3 381 aa23.32■■□□□ 1.32
SNRPF-201ENST00000266735 ARHGEF28Q8N1W1 1705 aaKnown RBP23.31■■□□□ 1.32
SNRPF-201ENST00000266735 NALCNQ8IZF0 1738 aa23.29■■□□□ 1.32
SNRPF-201ENST00000266735 MINK1Q8N4C8 1332 aaPredicted RBP23.28■■□□□ 1.32
SNRPF-201ENST00000266735 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
SNRPF-201ENST00000266735 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
SNRPF-201ENST00000266735 USP47Q96K76 1375 aa23.27■■□□□ 1.32
SNRPF-201ENST00000266735 HIRIP3Q9BW71 556 aaPredicted RBP23.26■■□□□ 1.31
SNRPF-201ENST00000266735 SLAIN2Q9P270 581 aa23.26■■□□□ 1.31
SNRPF-201ENST00000266735 ADGRB2O60241 1585 aa23.25■■□□□ 1.31
SNRPF-201ENST00000266735 FBXO41Q8TF61 875 aa23.25■■□□□ 1.31
SNRPF-201ENST00000266735 MST1RQ04912 1400 aa23.24■■□□□ 1.31
SNRPF-201ENST00000266735 SBNO2Q9Y2G9 1366 aa23.23■■□□□ 1.31
SNRPF-201ENST00000266735 WASLO00401 505 aaPredicted RBP23.23■■□□□ 1.31
SNRPF-201ENST00000266735 ZEB1P37275 1124 aaPredicted RBP23.23■■□□□ 1.31
SNRPF-201ENST00000266735 ST20-MTHFSA0A0A6YYL1 179 aa23.22■■□□□ 1.31
SNRPF-201ENST00000266735 PIP4K2BP78356 416 aa23.21■■□□□ 1.31
SNRPF-201ENST00000266735 SLC24A1O60721 1099 aa23.2■■□□□ 1.3
SNRPF-201ENST00000266735 C1orf167Q5SNV9 1468 aa23.2■■□□□ 1.3
SNRPF-201ENST00000266735 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
SNRPF-201ENST00000266735 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
SNRPF-201ENST00000266735 ANKARQ7Z5J8 1434 aa23.17■■□□□ 1.3
SNRPF-201ENST00000266735 EVC2Q86UK5 1308 aa23.17■■□□□ 1.3
SNRPF-201ENST00000266735 CDK19Q9BWU1 502 aa23.17■■□□□ 1.3
SNRPF-201ENST00000266735 QRICH2Q9H0J4 1663 aa23.17■■□□□ 1.3
SNRPF-201ENST00000266735 NUTM2FA1L443 756 aa23.16■■□□□ 1.3
SNRPF-201ENST00000266735 TESK2Q96S53 571 aa23.15■■□□□ 1.3
SNRPF-201ENST00000266735 SRPK2P78362 688 aaKnown RBP23.14■■□□□ 1.3
SNRPF-201ENST00000266735 BRINP3Q76B58 766 aa23.14■■□□□ 1.3
SNRPF-201ENST00000266735 TULP4Q9NRJ4 1543 aa23.14■■□□□ 1.3
SNRPF-201ENST00000266735 FMN2Q9NZ56 1722 aa23.13■■□□□ 1.29
SNRPF-201ENST00000266735 ESCO1Q5FWF5 840 aa23.13■■□□□ 1.29
SNRPF-201ENST00000266735 HSPA5P11021 654 aaKnown RBP23.12■■□□□ 1.29
SNRPF-201ENST00000266735 ORAI2Q96SN7 254 aa23.12■■□□□ 1.29
SNRPF-201ENST00000266735 PRR36Q9H6K5 1346 aa23.11■■□□□ 1.29
SNRPF-201ENST00000266735 NUDT16Q96DE0 195 aaKnown RBP23.11■■□□□ 1.29
SNRPF-201ENST00000266735 CABP2Q9NPB3 220 aa23.11■■□□□ 1.29
SNRPF-201ENST00000266735 TMF1P82094 1093 aa23.1■■□□□ 1.29
SNRPF-201ENST00000266735 ATP7BP35670 1465 aa23.09■■□□□ 1.29
SNRPF-201ENST00000266735 ILDR1Q86SU0 546 aaPredicted RBP23.09■■□□□ 1.29
SNRPF-201ENST00000266735 CCDC61Q9Y6R9 512 aa23.09■■□□□ 1.29
SNRPF-201ENST00000266735 ROBO1Q9Y6N7 1651 aa23.08■■□□□ 1.29
SNRPF-201ENST00000266735 PUS7Q96PZ0 661 aaKnown RBP23.08■■□□□ 1.29
SNRPF-201ENST00000266735 PHF8Q9UPP1 1060 aa23.07■■□□□ 1.28
SNRPF-201ENST00000266735 ATAD2Q6PL18 1390 aa23.06■■□□□ 1.28
SNRPF-201ENST00000266735 CDCA8Q53HL2 280 aa23.05■■□□□ 1.28
SNRPF-201ENST00000266735 USP32Q8NFA0 1604 aa23.05■■□□□ 1.28
SNRPF-201ENST00000266735 DISP3Q9P2K9 1392 aa23.04■■□□□ 1.28
SNRPF-201ENST00000266735 NPHP3Q7Z494 1330 aa23.03■■□□□ 1.28
SNRPF-201ENST00000266735 PLEKHG3A1L390 1219 aa23.01■■□□□ 1.27
SNRPF-201ENST00000266735 FOXO3O43524 673 aa23.01■■□□□ 1.27
SNRPF-201ENST00000266735 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
SNRPF-201ENST00000266735 PPIP5K1Q6PFW1 1433 aa23.01■■□□□ 1.27
SNRPF-201ENST00000266735 HSPA1LP34931 641 aa23.01■■□□□ 1.27
SNRPF-201ENST00000266735 AHDC1Q5TGY3 1603 aaPredicted RBP23.01■■□□□ 1.27
SNRPF-201ENST00000266735 KIF1AQ12756 1690 aa23■■□□□ 1.27
SNRPF-201ENST00000266735 NGDNQ8NEJ9 315 aaKnown RBP22.99■■□□□ 1.27
SNRPF-201ENST00000266735 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
SNRPF-201ENST00000266735 CABP1Q9NZU7 370 aa22.99■■□□□ 1.27
SNRPF-201ENST00000266735 SOS2Q07890 1332 aaPredicted RBP22.98■■□□□ 1.27
SNRPF-201ENST00000266735 POLR3AO14802 1390 aaPredicted RBP22.97■■□□□ 1.27
SNRPF-201ENST00000266735 TOPAZ1Q8N9V7 1692 aa22.96■■□□□ 1.27
SNRPF-201ENST00000266735 NINLQ9Y2I6 1382 aa22.96■■□□□ 1.27
SNRPF-201ENST00000266735 NHSL1Q5SYE7 1610 aa22.95■■□□□ 1.27
SNRPF-201ENST00000266735 ITSN1Q15811 1721 aa22.95■■□□□ 1.26
SNRPF-201ENST00000266735 PSME1Q06323 249 aa22.95■■□□□ 1.26
SNRPF-201ENST00000266735 ACEP12821 1306 aa22.95■■□□□ 1.26
SNRPF-201ENST00000266735 KRT28Q7Z3Y7 464 aa22.94■■□□□ 1.26
SNRPF-201ENST00000266735 TMC1Q8TDI8 760 aa22.94■■□□□ 1.26
SNRPF-201ENST00000266735 LRRC59Q96AG4 307 aaKnown RBP22.93■■□□□ 1.26
SNRPF-201ENST00000266735 PXDNQ92626 1479 aa22.92■■□□□ 1.26
SNRPF-201ENST00000266735 XPCQ01831 940 aaPredicted RBP22.92■■□□□ 1.26
SNRPF-201ENST00000266735 RGPD8O14715 1765 aaPredicted RBP22.92■■□□□ 1.26
SNRPF-201ENST00000266735 SLC12A5Q9H2X9 1139 aa22.91■■□□□ 1.26
SNRPF-201ENST00000266735 COL16A1Q07092 1604 aaPredicted RBP22.91■■□□□ 1.26
SNRPF-201ENST00000266735 PHLPP1O60346 1717 aa22.91■■□□□ 1.26
SNRPF-201ENST00000266735 ZNF692Q9BU19 519 aaPredicted RBP22.9■■□□□ 1.26
SNRPF-201ENST00000266735 SBNO1A3KN83 1393 aa22.9■■□□□ 1.26
SNRPF-201ENST00000266735 C11orf95C9JLR9 678 aaPredicted RBP22.89■■□□□ 1.25
SNRPF-201ENST00000266735 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.25
SNRPF-201ENST00000266735 TERF2IPQ9NYB0 399 aa22.89■■□□□ 1.25
SNRPF-201ENST00000266735 CPSF1Q10570 1443 aaKnown RBP22.88■■□□□ 1.25
SNRPF-201ENST00000266735 BRD4O60885 1362 aaPredicted RBP22.88■■□□□ 1.25
SNRPF-201ENST00000266735 HDGFL2Q7Z4V5 671 aaPredicted RBP22.88■■□□□ 1.25
SNRPF-201ENST00000266735 JCADQ9P266 1359 aa22.87■■□□□ 1.25
SNRPF-201ENST00000266735 KIF7Q2M1P5 1343 aa22.86■■□□□ 1.25
SNRPF-201ENST00000266735 SPATA31A3Q5VYP0 1347 aa22.86■■□□□ 1.25
SNRPF-201ENST00000266735 USP6P35125 1406 aa22.86■■□□□ 1.25
SNRPF-201ENST00000266735 CD163L1Q9NR16 1453 aa22.85■■□□□ 1.25
SNRPF-201ENST00000266735 TNS3Q68CZ2 1445 aa22.85■■□□□ 1.25
SNRPF-201ENST00000266735 A0A1W2PP64 1363 aa22.84■■□□□ 1.25
SNRPF-201ENST00000266735 KTN1Q86UP2 1357 aaKnown RBP22.84■■□□□ 1.25
SNRPF-201ENST00000266735 ANKRD36BQ8N2N9 1353 aa22.84■■□□□ 1.25
SNRPF-201ENST00000266735 PAK3O75914 559 aaPredicted RBP22.83■■□□□ 1.25
SNRPF-201ENST00000266735 MSH5O43196 834 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms