RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 CDCA7LQ96GN5 454 aa22.49■■□□□ 1.19
CHKA-201ENST00000265689 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
CHKA-201ENST00000265689 TULP4Q9NRJ4 1543 aa22.49■■□□□ 1.19
CHKA-201ENST00000265689 PDE3BQ13370 1112 aa22.49■■□□□ 1.19
CHKA-201ENST00000265689 RIMS1Q86UR5 1692 aaKnown RBP22.48■■□□□ 1.19
CHKA-201ENST00000265689 UBR1Q8IWV7 1749 aa22.46■■□□□ 1.19
CHKA-201ENST00000265689 LTKP29376 864 aa22.46■■□□□ 1.19
CHKA-201ENST00000265689 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
CHKA-201ENST00000265689 PTPRMP28827 1452 aa22.45■■□□□ 1.18
CHKA-201ENST00000265689 ALKQ9UM73 1620 aa22.45■■□□□ 1.18
CHKA-201ENST00000265689 B4GALNT3Q6L9W6 998 aa22.45■■□□□ 1.18
CHKA-201ENST00000265689 PUS7Q96PZ0 661 aaKnown RBP22.44■■□□□ 1.18
CHKA-201ENST00000265689 YTHDC2Q9H6S0 1430 aaKnown RBP22.43■■□□□ 1.18
CHKA-201ENST00000265689 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
CHKA-201ENST00000265689 PRAM1Q96QH2 718 aa22.42■■□□□ 1.18
CHKA-201ENST00000265689 MINK1Q8N4C8 1332 aaPredicted RBP22.41■■□□□ 1.18
CHKA-201ENST00000265689 MORC1Q86VD1 984 aa22.41■■□□□ 1.18
CHKA-201ENST00000265689 RCAN3Q9UKA8 241 aa22.41■■□□□ 1.18
CHKA-201ENST00000265689 METP08581 1390 aa22.4■■□□□ 1.18
CHKA-201ENST00000265689 NRXN3Q9Y4C0 1643 aa22.4■■□□□ 1.18
CHKA-201ENST00000265689 TNNT2P45379 298 aaPredicted RBP22.4■■□□□ 1.18
CHKA-201ENST00000265689 SLC26A8Q96RN1 970 aa22.4■■□□□ 1.18
CHKA-201ENST00000265689 POGKQ9P215 609 aa22.4■■□□□ 1.18
CHKA-201ENST00000265689 PLEKHH1Q9ULM0 1364 aa22.39■■□□□ 1.17
CHKA-201ENST00000265689 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
CHKA-201ENST00000265689 CCDC146Q8IYE0 955 aa22.38■■□□□ 1.17
CHKA-201ENST00000265689 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
CHKA-201ENST00000265689 ANKRD36BQ8N2N9 1353 aa22.38■■□□□ 1.17
CHKA-201ENST00000265689 CGNL1Q0VF96 1302 aa22.37■■□□□ 1.17
CHKA-201ENST00000265689 RRP1P56182 461 aaKnown RBP22.36■■□□□ 1.17
CHKA-201ENST00000265689 TXNDC2Q86VQ3 553 aa22.36■■□□□ 1.17
CHKA-201ENST00000265689 SETD1AO15047 1707 aaKnown RBP22.36■■□□□ 1.17
CHKA-201ENST00000265689 USP32Q8NFA0 1604 aa22.34■■□□□ 1.17
CHKA-201ENST00000265689 POLR3AO14802 1390 aaPredicted RBP22.33■■□□□ 1.17
CHKA-201ENST00000265689 ZNF521Q96K83 1311 aa22.32■■□□□ 1.16
CHKA-201ENST00000265689 APAF1O14727 1248 aa22.31■■□□□ 1.16
CHKA-201ENST00000265689 A0A1W2PP64 1363 aa22.31■■□□□ 1.16
CHKA-201ENST00000265689 ADAMTSL3P82987 1691 aa22.3■■□□□ 1.16
CHKA-201ENST00000265689 CDK19Q9BWU1 502 aa22.29■■□□□ 1.16
CHKA-201ENST00000265689 ATAD2Q6PL18 1390 aa22.29■■□□□ 1.16
CHKA-201ENST00000265689 NINLQ9Y2I6 1382 aa22.29■■□□□ 1.16
CHKA-201ENST00000265689 NLRP1Q9C000 1473 aa22.29■■□□□ 1.16
CHKA-201ENST00000265689 MTHFSP49914 203 aa22.28■■□□□ 1.16
CHKA-201ENST00000265689 GOLGA2Q08379 1002 aa22.27■■□□□ 1.16
CHKA-201ENST00000265689 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.27■■□□□ 1.16
CHKA-201ENST00000265689 DUSP27Q5VZP5 1158 aa22.27■■□□□ 1.16
CHKA-201ENST00000265689 CCDC136Q96JN2 1154 aa22.27■■□□□ 1.16
CHKA-201ENST00000265689 ADAMTS13Q76LX8 1427 aa22.26■■□□□ 1.15
CHKA-201ENST00000265689 NCKAP5LQ9HCH0 1330 aa22.26■■□□□ 1.15
CHKA-201ENST00000265689 NSD2O96028 1365 aa22.26■■□□□ 1.15
CHKA-201ENST00000265689 ABCC11Q96J66 1382 aa22.25■■□□□ 1.15
CHKA-201ENST00000265689 NUTM2FA1L443 756 aa22.25■■□□□ 1.15
CHKA-201ENST00000265689 EXOC6Q8TAG9 804 aa22.25■■□□□ 1.15
CHKA-201ENST00000265689 RBM19Q9Y4C8 960 aaKnown RBP22.25■■□□□ 1.15
CHKA-201ENST00000265689 DLC1Q96QB1 1528 aa22.24■■□□□ 1.15
CHKA-201ENST00000265689 PLIN1O60240 522 aa22.24■■□□□ 1.15
CHKA-201ENST00000265689 RBM33Q96EV2 1170 aaKnown RBP22.24■■□□□ 1.15
CHKA-201ENST00000265689 TERF2IPQ9NYB0 399 aa22.24■■□□□ 1.15
CHKA-201ENST00000265689 CD163L1Q9NR16 1453 aa22.24■■□□□ 1.15
CHKA-201ENST00000265689 SHPRHQ149N8 1683 aa22.24■■□□□ 1.15
CHKA-201ENST00000265689 GGNBP2Q9H3C7 697 aa22.23■■□□□ 1.15
CHKA-201ENST00000265689 CEP170BQ9Y4F5 1589 aaPredicted RBP22.23■■□□□ 1.15
CHKA-201ENST00000265689 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
CHKA-201ENST00000265689 CABP1Q9NZU7 370 aa22.22■■□□□ 1.15
CHKA-201ENST00000265689 EID1Q9Y6B2 187 aa22.22■■□□□ 1.15
CHKA-201ENST00000265689 SPINK5Q9NQ38 1064 aaPredicted RBP22.21■■□□□ 1.15
CHKA-201ENST00000265689 ROBO2Q9HCK4 1378 aa22.21■■□□□ 1.15
CHKA-201ENST00000265689 THEMISQ8N1K5 641 aaPredicted RBP22.21■■□□□ 1.15
CHKA-201ENST00000265689 CFAP53Q96M91 514 aa22.2■■□□□ 1.14
CHKA-201ENST00000265689 HDGFP51858 240 aaKnown RBP22.2■■□□□ 1.14
CHKA-201ENST00000265689 PTPRUQ92729 1446 aa22.2■■□□□ 1.14
CHKA-201ENST00000265689 FYB1O15117 783 aa22.19■■□□□ 1.14
CHKA-201ENST00000265689 HDGFL2Q7Z4V5 671 aaPredicted RBP22.19■■□□□ 1.14
CHKA-201ENST00000265689 DMRT2Q9Y5R5 561 aa22.18■■□□□ 1.14
CHKA-201ENST00000265689 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
CHKA-201ENST00000265689 PLEKHG1Q9ULL1 1385 aa22.17■■□□□ 1.14
CHKA-201ENST00000265689 ARHGAP23Q9P227 1491 aa22.16■■□□□ 1.14
CHKA-201ENST00000265689 SLIT1O75093 1534 aa22.16■■□□□ 1.14
CHKA-201ENST00000265689 RUNDC1Q96C34 613 aa22.16■■□□□ 1.14
CHKA-201ENST00000265689 NGEFQ8N5V2 710 aa22.15■■□□□ 1.14
CHKA-201ENST00000265689 RRP7AQ9Y3A4 280 aaKnown RBP22.14■■□□□ 1.14
CHKA-201ENST00000265689 NEUROD2Q15784 382 aa22.14■■□□□ 1.13
CHKA-201ENST00000265689 AMOTL2Q9Y2J4 779 aa22.14■■□□□ 1.13
CHKA-201ENST00000265689 WWC1Q8IX03 1113 aa22.13■■□□□ 1.13
CHKA-201ENST00000265689 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
CHKA-201ENST00000265689 TCP11L2Q8N4U5 519 aa22.13■■□□□ 1.13
CHKA-201ENST00000265689 E9PSI1 815 aa22.12■■□□□ 1.13
CHKA-201ENST00000265689 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
CHKA-201ENST00000265689 CRBNQ96SW2 442 aa22.12■■□□□ 1.13
CHKA-201ENST00000265689 U2AF1L5P0DN76 240 aaPredicted RBP22.11■■□□□ 1.13
CHKA-201ENST00000265689 U2AF1Q01081 240 aaKnown RBP eCLIP22.11■■□□□ 1.13
CHKA-201ENST00000265689 MED14O60244 1454 aa22.11■■□□□ 1.13
CHKA-201ENST00000265689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
CHKA-201ENST00000265689 SETD1BQ9UPS6 1966 aaKnown RBP22.1■■□□□ 1.13
CHKA-201ENST00000265689 IQSEC2Q5JU85 1478 aa22.1■■□□□ 1.13
CHKA-201ENST00000265689 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.1■■□□□ 1.13
CHKA-201ENST00000265689 NKTRP30414 1462 aaKnown RBP22.09■■□□□ 1.13
CHKA-201ENST00000265689 TECPR2O15040 1411 aa22.09■■□□□ 1.13
CHKA-201ENST00000265689 FAM135BQ49AJ0 1406 aa22.09■■□□□ 1.13
CHKA-201ENST00000265689 ANKRD26Q9UPS8 1709 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms